+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Parasteatoda tepidariorum (common house spider)

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs D 107456764 rRNA 2'-O-methyltransferase fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D 107436592 nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 107439418 nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 107456598 nucleolar protein 58 K14565 NOP58; nucleolar protein 58 D 107445859 NHP2-like protein 1 homolog K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 D 107436290 box C/D snoRNA protein 1 isoform X1 K27833 ZNHIT6; box C/D snoRNA protein 1 C Box H/ACA snoRNPs D 107437367 H/ACA ribonucleoprotein complex subunit 4 isoform X1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 107436380 H/ACA ribonucleoprotein complex subunit 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D 107452518 H/ACA ribonucleoprotein complex subunit 2-like protein K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D 122268242 H/ACA ribonucleoprotein complex subunit 3-like K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D 107441610 H/ACA ribonucleoprotein complex non-core subunit NAF1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 D 107443747 protein SHQ1 homolog K14764 SHQ1; protein SHQ1 B 90S particles C U3 small nucleolar RNA-associated proteins D 107442777 U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D 107452368 U3 small nucleolar ribonucleoprotein protein IMP4 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D 107447531 U3 small nucleolar ribonucleoprotein protein MPP10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D 107456927 neuroguidin isoform X2 K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5 D 107455811 ribosomal RNA-processing protein 7 homolog A K14545 RRP7; ribosomal RNA-processing protein 7 D 107438482 periodic tryptophan protein 2 homolog K14558 PWP2; periodic tryptophan protein 2 D 107443821 nucleolar protein 14 homolog K14766 NOP14; nucleolar protein 14 D 107451489 nucleolar protein 14 K14766 NOP14; nucleolar protein 14 D 107451500 nucleolar protein 14 homolog K14766 NOP14; nucleolar protein 14 D 107445051 WD repeat-containing protein 43 isoform X1 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 107439255 WD repeat-containing protein 43 isoform X1 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 107444954 WD repeat-containing protein 46 K14768 UTP7; U3 small nucleolar RNA-associated protein 7 D 107441365 HEAT repeat-containing protein 1 K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D 107449594 probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D 107439747 WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D 107447834 transducin beta-like protein 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D 107447518 U3 small nucleolar RNA-associated protein 14 homolog B K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D 107441654 U3 small nucleolar RNA-associated protein 15 homolog isoform X1 K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D 107451336 WD repeat-containing protein 75 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D 107457399 U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D 107448209 nucleolar complex protein 4 homolog B isoform X1 K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D 107453043 small subunit processome component 20 homolog K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D 107445490 WD repeat-containing protein 36 K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D 107446113 nucleolar protein 6 K14544 UTP22; U3 small nucleolar RNA-associated protein 22 D 107453611 rRNA-processing protein UTP23 homolog K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D 107439793 rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D 107437008 U3 small nucleolar RNA-associated protein 25 homolog isoform X1 K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D 107449285 ribosomal L1 domain-containing protein 1 isoform X1 K14775 UTP30; ribosome biogenesis protein UTP30 C Helicases D 107440403 probable ATP-dependent RNA helicase DDX10 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D 107453757 ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 107453758 ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 107453764 probable ATP-dependent RNA helicase pitchoune K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 107451822 probable ATP-dependent RNA helicase DDX47 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D 107437782 probable ATP-dependent RNA helicase DDX49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D 107449655 probable ATP-dependent RNA helicase DDX52 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D 107446879 putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X2 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 122268224 LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 107456411 probable ATP-dependent RNA helicase DHX37 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] D 107439726 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] C GTPase D 107456994 ribosome biogenesis protein BMS1 homolog isoform X1 K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D 107452578 ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3] D 107443203 RNA exonuclease 4 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D 107442088 lariat debranching enzyme A K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D 107441846 casein kinase II subunit alpha isoform X1 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 107441767 casein kinase II subunit beta K03115 CSNK2B; casein kinase II subunit beta C Other 90S particles D 107452289 protein AATF K14782 AATF; protein AATF/BFR2 D 107453405 ribosomal RNA small subunit methyltransferase NEP1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D 107455333 pre-rRNA-processing protein esf2 isoform X1 K14785 ESF2; ESF2/ABP1 family protein D 107450779 pre-rRNA-processing protein esf2 K14785 ESF2; ESF2/ABP1 family protein D 122268219 protein KRI1 homolog K14786 KRI1; protein KRI1 D 107438640 KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein D 107438266 probable RNA-binding protein 19 K14787 MRD1; multiple RNA-binding domain-containing protein 1 D 107436085 RNA cytidine acetyltransferase isoform X1 K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D 107452094 RNA cytidine acetyltransferase isoform X1 K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D 107456524 nucleolin K11294 NCL; nucleolin D 107436681 nucleolar protein 10 K14788 NOL10; ribosome biogenesis protein ENP2 D 107455909 pumilio homolog 23 K14790 NOP9; nucleolar protein 9 D 122269962 periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 107453967 periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 107437459 RNA 3'-terminal phosphate cyclase-like protein K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D 107436701 U3 small nucleolar RNA-interacting protein 2 K14793 RRP9; ribosomal RNA-processing protein 9 D 107451191 RRP12-like protein isoform X1 K14794 RRP12; ribosomal RNA-processing protein 12 D 107456850 ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36 D 107437502 DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D 107438639 serine/threonine-protein kinase RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D 107441919 serine/threonine-protein kinase rio2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D 107438829 probable dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D 107443154 probable 18S rRNA (guanine-N(7))-methyltransferase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D 107441925 rRNA N6-adenosine-methyltransferase METTL5 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5 D 107453051 bystin K14797 ENP1; essential nuclear protein 1 D 107447638 protein LTV1 homolog K14798 LTV1; protein LTV1 D 107456193 protein LTV1 homolog K14798 LTV1; protein LTV1 D 107451688 RNA-binding protein NOB1 K11883 NOB1; RNA-binding protein NOB1 D 107437072 RNA-binding protein pno1 K11884 PNO1; RNA-binding protein PNO1 D 107439373 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran D 107447018 adenylate kinase isoenzyme 6 K18532 AK6; adenylate kinase [EC:2.7.4.3] D 107454961 pre-rRNA-processing protein TSR1 homolog K14799 TSR1; pre-rRNA-processing protein TSR1 D 107437988 pre-rRNA-processing protein TSR2 homolog isoform X1 K14800 TSR2; pre-rRNA-processing protein TSR2 D 107447874 18S rRNA aminocarboxypropyltransferase isoform X1 K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D 107450485 programmed cell death protein 2 K14801 TSR4; pre-rRNA-processing protein TSR4 D 107455809 exportin-1 isoform X1 K14290 XPO1; exportin-1 D 107447827 importin subunit beta-1 isoform X1 K14293 KPNB1; importin subunit beta-1 D 107453679 transportin-1 isoform X1 K18752 TNPO1; transportin-1 D 107440346 importin-4 K20221 IPO4; importin-4 D 107454300 importin-5 K20222 IPO5; importin-5 D 107449398 importin-7 K20223 IPO7; importin-7 D 107445693 importin-9 K20224 IPO9; importin-9 C Other pre-40S particles D 107446997 probable phospholipid-transporting ATPase IA isoform X1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 107447633 eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J D 107448234 probable protein phosphatase 2C T23F11.1 K14803 PTC2_3; protein phosphatase PTC2/3 [EC:3.1.3.16] D 107437713 ATP-binding cassette sub-family E member 1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases D 107444116 probable ATP-dependent RNA helicase DDX5 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 107453757 ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 107453758 ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 107453764 probable ATP-dependent RNA helicase pitchoune K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 107438634 ATP-dependent RNA helicase DDX24 isoform X1 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D 107450912 probable ATP-dependent RNA helicase DDX27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D 107448919 probable ATP-dependent RNA helicase DDX31 isoform X1 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D 107449632 ATP-dependent RNA helicase DDX51 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7] D 107442951 ATP-dependent RNA helicase DDX54 isoform X1 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D 107457333 ATP-dependent RNA helicase DDX55 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D 107449658 probable ATP-dependent RNA helicase DDX56 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7] D 107449781 exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C GTPases D 107447820 guanine nucleotide-binding protein-like 3 homolog K14538 NUG1; nuclear GTP-binding protein D 122268385 guanine nucleotide-binding protein-like 3 homolog K14538 NUG1; nuclear GTP-binding protein D 107436752 guanine nucleotide-binding protein-like 3 homolog K14538 NUG1; nuclear GTP-binding protein D 107445744 nucleolar GTP-binding protein 2 K14537 NUG2; nuclear GTP-binding protein D 107454357 GTP-binding protein 4 K06943 NOG1; nucleolar GTP-binding protein D 107443096 large subunit GTPase 1 homolog K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D 107444843 elongation factor-like GTPase 1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D 107444391 RNA exonuclease 1 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 107436929 RNA exonuclease 1 homolog K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 107451429 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D RNase MRP E 107447153 ribonucleases P/MRP protein subunit POP1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] E 107452654 ribonuclease P protein subunit p29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E 107457367 ribonuclease P protein subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] E 107446234 ribonuclease P protein subunit p20 K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5] E 107451575 ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 107457321 uncharacterized protein LOC107457321 isoform X1 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] C Kinases D 107442084 polynucleotide 5'-hydroxyl-kinase NOL9 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D 107448034 ATP-binding cassette sub-family F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D 107457315 dnaJ homolog subfamily C member 21 K09506 DNAJA5; DnaJ homolog subfamily A member 5 D 107438062 eukaryotic translation initiation factor 6-like K03264 EIF6; translation initiation factor 6 D 107436593 heat shock protein 70 B2 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 107443580 major heat shock 70 kDa protein Ab-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 107440487 heat shock 70 kDa protein cognate 4 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 107453144 major heat shock 70 kDa protein Ab K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 107456624 heat shock protein 70 B2 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 107448913 uncharacterized protein LOC107448913 K14815 MRT4; mRNA turnover protein 4 D 107455359 60S ribosomal export protein NMD3 isoform X1 K07562 NMD3; 60S ribosomal export protein NMD3 D 107456009 nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor D 107441431 NTF2-related export protein 2 K14285 NXT1_2; NTF2-related export protein 1/2 D 107439373 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran D 107441096 zinc finger protein 622 K14816 REI1; pre-60S factor REI1 D 107447817 ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1 D 107445412 ATPase family protein 2 homolog isoform X1 K14575 AFG2; AAA family ATPase D 107456305 ATPase family protein 2 homolog K14575 AFG2; AAA family ATPase D 107445164 spermatogenesis-associated protein 5-like protein 1 isoform X1 K26051 SPATA5L1; ribosome biogenesis protein SPATA5L1 [EC:3.6.4.10] D 107443016 cyclin-dependent kinase 2-interacting protein K26052 CINP; cyclin-dependent kinase 2-interacting protein D 107455809 exportin-1 isoform X1 K14290 XPO1; exportin-1 D 107447827 importin subunit beta-1 isoform X1 K14293 KPNB1; importin subunit beta-1 D 107453679 transportin-1 isoform X1 K18752 TNPO1; transportin-1 D 107440346 importin-4 K20221 IPO4; importin-4 D 107454300 importin-5 K20222 IPO5; importin-5 D 107449398 importin-7 K20223 IPO7; importin-7 D 107445693 importin-9 K20224 IPO9; importin-9 D 107454289 probable dual specificity protein phosphatase DDB_G0281963 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] C 5-FMC complex D 107446358 testis-expressed protein 10 K14827 IPI1; pre-rRNA-processing protein IPI1 D 107455637 WD repeat-containing protein 18 K14829 IPI3; pre-rRNA-processing protein IPI3 D 110282188 uncharacterized protein LOC110282188 K16912 LAS1; ribosomal biogenesis protein LAS1 D 107457168 proline-, glutamic acid- and leucine-rich protein 1 K16913 PELP1; proline-, glutamic acid- and leucine-rich protein 1 C Ribosome quality control proteins D 107448018 E3 ubiquitin-protein ligase listerin K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D 107439240 transcription factor 25 isoform X1 K24970 TCF25; transcription factor 25 D 107444363 nuclear export mediator factor NEMF K24971 NEMF; nuclear export mediator factor NEMF D 107444456 transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D 107446730 nuclear protein localization protein 4 homolog K14015 NPLOC4; nuclear protein localization protein 4 D 107452203 ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1 K14016 UFD1; ubiquitin fusion degradation protein 1 D 107457177 putative peptidyl-tRNA hydrolase PTRHD1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29] C Other pre-60S particles D 107445237 ribosome biogenesis protein BRX1 homolog K14820 BRX1; ribosome biogenesis protein BRX1 D 107443239 zinc finger protein 593 homolog K14821 BUD20; bud site selection protein 20 D 107445486 coiled-coil domain-containing protein 86 K14822 CGR1; rRNA-processing protein CGR1 D 107441094 probable rRNA-processing protein EBP2 K14823 EBP2; rRNA-processing protein EBP2 D 107448698 ribosome biogenesis protein bop1 isoform X1 K14824 ERB1; ribosome biogenesis protein ERB1 D 107456748 transmembrane emp24 domain-containing protein 5 K14825 TMED5; p24 family protein gamma-2 D 107452115 transmembrane emp24 domain-containing protein 5-like K14825 TMED5; p24 family protein gamma-2 D 107446721 46 kDa FK506-binding nuclear protein K14826 FPR3_4; FK506-binding nuclear protein [EC:5.2.1.8] D 107456814 p21-activated protein kinase-interacting protein 1-like K14830 MAK11; protein MAK11 D 107449425 protein MAK16 homolog K14831 MAK16; protein MAK16 D 107439253 CCAAT/enhancer-binding protein zeta isoform X1 K14832 MAK21; ribosome biogenesis protein MAK21 D 107455693 midasin isoform X1 K14572 MDN1; midasin D 107456625 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D 107447164 nucleolar complex protein 2 homolog K14833 NOC2; nucleolar complex protein 2 D 107455389 nucleolar complex protein 3 homolog K14834 NOC3; nucleolar complex protein 3 D 107448144 probable 28S rRNA (cytosine-C(5))-methyltransferase K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D 107448113 RNA-binding protein 28 isoform X1 K14573 NOP4; nucleolar protein 4 D 107445326 RNA-binding protein 34 K14837 NOP12; nucleolar protein 12 D 107447746 MKI67 FHA domain-interacting nucleolar phosphoprotein K14838 NOP15; nucleolar protein 15 D 122270988 MKI67 FHA domain-interacting nucleolar phosphoprotein-like K14838 NOP15; nucleolar protein 15 D 107455223 ribosome biogenesis protein NOP53 K14840 NOP53; nucleolar protein 53 D 107445064 WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1 D 107447064 ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2 D 107450555 pescadillo homolog K14843 PES1; pescadillo D 107453126 pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6 D 122269962 periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 107453967 periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 107442784 decapping and exoribonuclease protein K14845 RAI1; RAT1-interacting protein D 107456019 decapping and exoribonuclease protein K14845 RAI1; RAT1-interacting protein D 107438310 ribosomal oxygenase 1 isoform X1 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69] D 107450167 nuclear valosin-containing protein-like K14571 RIX7; ribosome biogenesis ATPase D 107440733 ribosome production factor 1 K14846 RPF1; ribosome production factor 1 D 107453287 ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2 D 107443526 glutamate-rich WD repeat-containing protein 1 K14848 RRB1; ribosome assembly protein RRB1 D 107436181 ribosomal RNA processing protein 1 homolog B isoform X1 K14849 RRP1; ribosomal RNA-processing protein 1 D 107447557 ribosomal RNA-processing protein 8-like isoform X1 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D 107451191 RRP12-like protein isoform X1 K14794 RRP12; ribosomal RNA-processing protein 12 D 107445415 nucleolar protein 12 K14851 RRP17; ribosomal RNA-processing protein 17 D 107447379 ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis D 107443011 notchless protein homolog 1 K14855 RSA4; ribosome assembly protein 4 D 107441207 protein SDA1 homolog K14856 SDA1; protein SDA1 D 107439419 pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D 107444556 suppressor of SWI4 1 homolog K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D 122268720 suppressor of SWI4 1 homolog isoform X1 K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D 107449449 translation machinery-associated protein 16 isoform X1 K14860 TMA16; translation machinery-associated protein 16 D 107448442 nucleolar pre-ribosomal-associated protein 1 K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D 122270425 ribosome biogenesis protein WDR12 homolog K14863 WDR12; ribosome biogenesis protein D 107446556 ribosome biogenesis protein WDR12 homolog K14863 WDR12; ribosome biogenesis protein D 107454426 uncharacterized protein DDB_G0283357 isoform X1 K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1 D 107438867 zinc finger HIT domain-containing protein 3 isoform X1 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 B Other ribosome biogenesis factors C 107446882 protein BCCIP homolog K15262 BCP1; protein BCP1 C 107454882 5-methylcytosine rRNA methyltransferase nsun-4 isoform X1 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-] C 107438935 uncharacterized protein LOC107438935 K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C 107455976 mitochondrial dimethyladenosine transferase 1 isoform X1 K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-] C 107452212 rRNA methyltransferase 1, mitochondrial isoform X1 K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C 107439174 S-adenosylmethionine sensor upstream of mTORC1 isoform X1 K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286] C 107439207 rRNA methyltransferase 3, mitochondrial K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-] C 107450314 rRNA methyltransferase 3, mitochondrial K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-] C 107456491 rRNA N6-adenosine-methyltransferase ZCCHC4 isoform X1 K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-] C 107456650 probable ATP-dependent RNA helicase DDX28 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7] C 107442281 DNA-binding protein SMUBP-2 K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] C 107447807 bifunctional peptidase and arginyl-hydroxylase JMJD5 isoform X1 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-] C 107441376 GTPase Era, mitochondrial K03595 era; GTPase C 107443363 proliferation-associated protein 2G4 K26736 PA2G4; ERBB-3 binding protein C 107446317 methyltransferase-like protein 17, mitochondrial isoform X1 K27906 METTL17; ribosome assembly protein METTL17/RSM22, mitochondrial C 107454111 mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D 107436592 nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 107439418 nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 107451683 60S ribosomal protein L7a K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D 107437367 H/ACA ribonucleoprotein complex subunit 4 isoform X1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 122268242 H/ACA ribonucleoprotein complex subunit 3-like K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors C 23S rRNA modification factors B ribosomal protein modification factors B rRNA processing factors C 107452578 ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3] B rRNA helicases B GTPases C 107441376 GTPase Era, mitochondrial K03595 era; GTPase C 107454111 mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-] B Other maturation factors C 107438994 yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions D 122269288 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3 D 122269573 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3 D 122269498 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3 D 122269289 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3 D 122270508 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3 D 122269809 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13 D 122269810 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13 D 122270817 small nucleolar RNA SNORD18 K14866 SNORD18; small nucleolar RNA SNORD18 D 122270867 small nucleolar RNA SNORD36 K14874 SNORD36; small nucleolar RNA SNORD36 D 122270870 small nucleolar RNA SNORD38 K14887 SNORD38; small nucleolar RNA SNORD38 C SnoRNAs act as guides for 2'-O-ribose methylation D 122270727 small nucleolar RNA SNORD2 K14870 SNORD2; small nucleolar RNA SNORD2 D 122269265 small nucleolar RNA SNORD2 K14870 SNORD2; small nucleolar RNA SNORD2 D 122270725 small nucleolar RNA SNORD2 K14870 SNORD2; small nucleolar RNA SNORD2 D 122272064 small nucleolar RNA U54 K26307 SNORD54; small nucleolar RNA SNORD54 D 122270329 small nucleolar RNA SNORD58 K26310 SNORD58; small nucleolar RNA SNORD58 D 122268947 small nucleolar RNA SNORD61 K26311 SNORD61; small nucleolar RNA SNORD61 D 122268948 small nucleolar RNA SNORD61 K26311 SNORD61; small nucleolar RNA SNORD61 D 122270110 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114 B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions D 122268744 small nucleolar RNA SNORA79 K26319 SNORA79; small nucleolar RNA SNORA79 D 122268745 small nucleolar RNA SNORA79 K26319 SNORA79; small nucleolar RNA SNORA79 C SnoRNAs act as guides for pseudouridynation D 122271250 small nucleolar RNA SNORA68 K26360 SNORA68; small nucleolar RNA SNORA68 B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: October 31, 2024