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Mitochondrial Biogenesis - Phaeodactylum tricornutum
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AMitochondrial DNA transcription, translation, and replication factors
B Mitochondrial DNA-encoded proteins
C Mitochondrial respiratory chain complex I
C Mitochondrial respiratory chain complex III
C Cytochrome c oxidase
C F-type ATPase
B Mitochondrial transcription and translation factors
C Mitochondrial RNA polymerase
D PHATRDRAFT_49483 RpoT; polymerase dna-directed RNA polymerase K10908 POLRMT; DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]
C Mitochondrial transcription factors
C Mitochondrial translation factors
D PHATRDRAFT_23083 TufA; hypothetical protein K02358 tuf; elongation factor Tu
D PHATRDRAFT_11189 hypothetical protein K02355 fusA; elongation factor G
D PHATRDRAFT_44833 hypothetical protein K02355 fusA; elongation factor G
D PHATRDRAFT_49459 hypothetical protein K02355 fusA; elongation factor G
D PHATR_43940 hypothetical protein K15031 MTERF; mitochondrial transcription termination factor family protein
D PHATR_44136 hypothetical protein K15031 MTERF; mitochondrial transcription termination factor family protein
C RNase MRP
D PHATRDRAFT_32726 hypothetical protein K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D PHATRDRAFT_54956 hypothetical protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
C Mitochondrial ribonuclease P
D PHATRDRAFT_42563 hypothetical protein K17655 MRPP3; mitochondrial ribonuclease P protein 3
C Other mitochondrial DNA transcription and translation factors
D PHATRDRAFT_2542 hypothetical protein K18798 AFG1; peroxisome-assembly ATPase [EC:3.6.4.7]
D PHATRDRAFT_12106 hypothetical protein K18156 ATP23; mitochondrial inner membrane protease ATP23 [EC:3.4.24.-]
D PHATR_10251 hypothetical protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D PHATRDRAFT_22873 hypothetical protein K05863 SLC25A4S; solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
D PHATRDRAFT_4342 hypothetical protein K15113 SLC25A28_37; solute carrier family 25 (mitochondrial iron transporter), member 28/37
D PHATRDRAFT_45368 hypothetical protein K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PHATRDRAFT_11088 hypothetical protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PHATRDRAFT_19761 hypothetical protein K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D PHATRDRAFT_bd552 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PHATRDRAFT_36013 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PHATRDRAFT_42910 hypothetical protein K23498 COXPD7; peptide chain release factor
D PHATRDRAFT_41745 hypothetical protein K25877 MYG1; MYG1 exonuclease [EC:3.1.-.-]
B Mitochondrial DNA replication factors
C Mitochondrial DNA polymerase
D PHATRDRAFT_45191 hypothetical protein K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Mitochondrial DNA maintenance factors
D PHATRDRAFT_29606 hypothetical protein K01173 ENDOG; endonuclease G, mitochondrial
D PHATRDRAFT_16073 hypothetical protein K17679 MSS116; ATP-dependent RNA helicase MSS116, mitochondrial [EC:5.6.2.7]
D PHATRDRAFT_605 hypothetical protein K17680 PEO1; twinkle protein [EC:5.6.2.3]
C Other Mitochondrial DNA replication factors
D PHATRDRAFT_44478 hypothetical protein K17681 ATAD3A_B; ATPase family AAA domain-containing protein 3A/B
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AMitochondrial protein import machinery
B Endoplasmic reticulum membrane and cytosol
C ER-mitochondria encounter structure (ERMES) complex
C Other ER-memrane and cytosol factors
D PHATRDRAFT_38015 hypothetical protein K09503 DNAJA2; DnaJ homolog subfamily A member 2
D PHATRDRAFT_42151 hypothetical protein K09503 DNAJA2; DnaJ homolog subfamily A member 2
D PHATRDRAFT_45953 hypothetical protein K07870 RHOT1; mitochondrial Rho GTPase 1 [EC:3.6.5.-]
D PHATRDRAFT_54019 HSP70A; protein heat shock protein Hsp70 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
B Outer membrane
C Transporter outer membrane (TOM) complex
D PHATRDRAFT_48010 hypothetical protein K11518 TOM40; mitochondrial import receptor subunit TOM40
D PHATRDRAFT_47492 hypothetical protein K17768 TOM70; mitochondrial import receptor subunit TOM70
C TOB/SAM complex
C Porin
D PHATRDRAFT_50236 hypothetical protein K15040 VDAC2; voltage-dependent anion channel protein 2
C ERMES complex
C Other outer membrane factor
B Inter membrane space
C Transporter inner membrane (TIM) 9/10 complex
D PHATRDRAFT_22027 hypothetical protein K17777 TIM9; mitochondrial import inner membrane translocase subunit TIM9
D PHATRDRAFT_8363 hypothetical protein K17778 TIM10; mitochondrial import inner membrane translocase subunit TIM10
C TIM8/13 complex
D PHATRDRAFT_49172 hypothetical protein K17780 TIM8; mitochondrial import inner membrane translocase subunit TIM8
C Mitochondrial intermembrane space assembly (MIA) complex
D PHATR_13254 hypothetical protein K17783 ERV1; mitochondrial FAD-linked sulfhydryl oxidase [EC:1.8.3.2]
B Inner mambrane
C MICOS complex
C MICOS complex (yeast)
C TIM22 complex
D PHATRDRAFT_7114 hypothetical protein K17790 TIM22; mitochondrial import inner membrane translocase subunit TIM22
C TIM23 complex
D PHATRDRAFT_35810 hypothetical protein K17794 TIM23; mitochondrial import inner membrane translocase subunit TIM23
D PHATRDRAFT_bd218 hypothetical protein K17795 TIM17; mitochondrial import inner membrane translocase subunit TIM17
D PHATRDRAFT_42559 hypothetical protein K17796 TIM21; mitochondrial import inner membrane translocase subunit TIM21
D PHATRDRAFT_3171 hypothetical protein K17496 TIM50; mitochondrial import inner membrane translocase subunit TIM50
C Mitochondrial calcium uniporter complex
C Other inner membrane factors
D PHATRDRAFT_3241 hypothetical protein K17800 LETM1; LETM1 and EF-hand domain-containing protein 1, mitochondrial
D PHATRDRAFT_10934 hypothetical protein K09647 IMP1; mitochondrial inner membrane protease subunit 1 [EC:3.4.21.-]
D PHATRDRAFT_34078 hypothetical protein K17803 OMS1; methyltransferase OMS1, mitochondrial [EC:2.1.1.-]
D PHATRDRAFT_14467 hypothetical protein K22138 MPC1; mitochondrial pyruvate carrier 1
D PHATRDRAFT_14636 hypothetical protein K22139 MPC2; mitochondrial pyruvate carrier 2
B Matrix
C MMC/PAM proteins
D PHATRDRAFT_44351 hypothetical protein K17804 TIM44; mitochondrial import inner membrane translocase subunit TIM44
D PHATRDRAFT_17633 Hsp70_1; hypothetical protein K04043 dnaK; molecular chaperone DnaK
D PHATRDRAFT_12188 hypothetical protein K03687 GRPE; molecular chaperone GrpE
D PHATRDRAFT_8096 hypothetical protein K09539 DNAJC19; DnaJ homolog subfamily C member 19
D PHATRDRAFT_44606 hypothetical protein K17805 PAM16; mitochondrial import inner membrane translocase subunit TIM16
C Other matrix factors
D PHATRDRAFT_15689 hypothetical protein K01412 PMPCA; mitochondrial-processing peptidase subunit alpha [EC:3.4.24.64]
D PHATRDRAFT_20787 hypothetical protein K17732 PMPCB; mitochondrial-processing peptidase subunit beta [EC:3.4.24.64]
D PHATRDRAFT_24006 hypothetical protein K01410 MIPEP; mitochondrial intermediate peptidase [EC:3.4.24.59]
D PHATRDRAFT_41721 CPN60_2; nuclear-encoded-like protein of chloroplast gro K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PHATRDRAFT_24820 CPN60_1; mitochondria-targeted chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PHATRDRAFT_12004 hypothetical protein K04078 groES; chaperonin GroES
D PHATR_46791 hypothetical protein K04078 groES; chaperonin GroES
D PHATR_50996 hypothetical protein K03686 dnaJ; molecular chaperone DnaJ
D PHATRDRAFT_16707 GLO_1; glyoxalase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18]
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AMitochondrial quality control factors
B Regulator of mitochondrial biogenesis
C Ubiquitas transcription factors
D PHATRDRAFT_11189 hypothetical protein K02355 fusA; elongation factor G
D PHATRDRAFT_44833 hypothetical protein K02355 fusA; elongation factor G
D PHATRDRAFT_49459 hypothetical protein K02355 fusA; elongation factor G
C Nuclear respiratory factors
C Coactivators
D PHATRDRAFT_45764 hypothetical protein K04498 EP300; E1A/CREB-binding protein [EC:2.3.1.48]
D PHATRDRAFT_54505 hypothetical protein K04498 EP300; E1A/CREB-binding protein [EC:2.3.1.48]
C Proteins involved in Fe-S cluster biogenesis
D PHATRDRAFT_34119 IscS; precursor of desulfurase cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PHATRDRAFT_2966 CsdB; selenocysteine lyase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PHATRDRAFT_28374 IscU; iron-sulphur assembly protein isc K22068 ISCU; iron-sulfur cluster assembly enzyme ISCU, mitochondrial
D PHATRDRAFT_14927 hypothetical protein K19054 FXN; frataxin [EC:1.16.3.1]
D PHATRDRAFT_7342 hypothetical protein K22071 FDX2; ferredoxin-2, mitochondrial
D PHATRDRAFT_14478 hypothetical protein K22071 FDX2; ferredoxin-2, mitochondrial
D PHATRDRAFT_43018 hypothetical protein K18914 FDXR; adrenodoxin-NADP+ reductase [EC:1.18.1.6]
D PHATRDRAFT_17633 Hsp70_1; hypothetical protein K04043 dnaK; molecular chaperone DnaK
D PHATRDRAFT_45826 hypothetical protein K04082 hscB; molecular chaperone HscB
D PHATRDRAFT_44879 hypothetical protein K14001 SIL1; nucleotide exchange factor SIL1
D PHATRDRAFT_37615 GLRXM1; glutaredoxin K07390 grxD; monothiol glutaredoxin
D PHATRDRAFT_11154 hypothetical protein K22063 ISCA1; iron-sulfur cluster assembly 1
D PHATRDRAFT_14867 hypothetical protein K22063 ISCA1; iron-sulfur cluster assembly 1
D PHATRDRAFT_7780 hypothetical protein K22072 ISCA2; iron-sulfur cluster assembly 2
D PHATRDRAFT_45164 hypothetical protein K22073 IBA57; transferase CAF17, mitochondrial [EC:2.1.-.-]
D PHATRDRAFT_16693 hypothetical protein K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
D PHATRDRAFT_14849 hypothetical protein K22066 BOLA1; BolA-like protein 1
D PHATRDRAFT_11230 hypothetical protein K22066 BOLA1; BolA-like protein 1
D PHATRDRAFT_13034 iron carrier K23503 SFXN5; sideroflexin-5
C Other regulator of mitochondrial biogenesis
D PHATRDRAFT_8773 MARK3; hypothetical protein K07198 PRKAA; 5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.31]
D PHATRDRAFT_18202 hypothetical protein K08675 PRSS15; ATP-dependent Lon protease [EC:3.4.21.53]
D PHATRDRAFT_47237 hypothetical protein K26537 UXT; protein UXT
B Mitochondrial respiratory chain complex assembly factors
C Complex-I assembly factors
D PHATRDRAFT_11990 hypothetical protein K18162 NDUFAF5; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 [EC:2.1.1.-]
D PHATRDRAFT_33756 hypothetical protein K18163 NDUFAF6; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
D PHATRDRAFT_15641 hypothetical protein K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
C Complex-II assembly factors
C Complex-III assembly factors
D PHATRDRAFT_39057 hypothetical protein K18170 LYRM7; complex III assembly factor LYRM7
C Complex-IV assembly factors
D PHATRDRAFT_34391 hypothetical protein K18172 CMC2; COX assembly mitochondrial protein 2
D PHATRDRAFT_16147 hypothetical protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PHATRDRAFT_21354 hypothetical protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PHATRDRAFT_9161 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PHATRDRAFT_43657 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PHATRDRAFT_bd1384 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D PHATRDRAFT_14770 hypothetical protein K07152 SCO1; protein SCO1
C Complex-V assembly factors
D PHATRDRAFT_50559 hypothetical protein K07556 ATPeAF2; ATP synthase mitochondrial F1 complex assembly factor 2
D PHATRDRAFT_6580 hypothetical protein K18192 ATP10; mitochondrial ATPase complex subunit ATP10
B Mitochondrial dynamics
C Fission and Fusion factors
D PHATRDRAFT_35318 hypothetical protein K09650 PARL; rhomboid-like protein [EC:3.4.21.105]
D PHATRDRAFT_54751 DYN1; hypothetical protein K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5]
D PHATRDRAFT_49399 hypothetical protein K17969 FIS1; mitochondrial fission 1 protein
C Actin cytoskeleton organization
D PHATRDRAFT_28723 hypothetical protein K17972 NAA20; N-terminal acetyltransferase B complex catalytic subunit [EC:2.3.1.254]
D PHATRDRAFT_47883 hypothetical protein K17973 NAA25; N-terminal acetyltransferase B complex non-catalytic subunit
C Mitochondrial movement
D PHATRDRAFT_54960 hypothetical protein K17080 PHB1; prohibitin 1
D PHATRDRAFT_54958 prohibitin-like protein K17080 PHB1; prohibitin 1
D PHATRDRAFT_12799 prohibitin-like protein K17081 PHB2; prohibitin 2
C Retention of mitochondria
D PHATRDRAFT_54751 DYN1; hypothetical protein K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5]
D PHATRDRAFT_432 myoA4; hypothetical protein K10357 MYO5; myosin V
D PHATRDRAFT_54688 myoA3; hypothetical protein K10357 MYO5; myosin V
C Morphogenesis factors
D PHATRDRAFT_45953 hypothetical protein K07870 RHOT1; mitochondrial Rho GTPase 1 [EC:3.6.5.-]
D PHATR_46790 hypothetical protein K17408 DAP3; small subunit ribosomal protein S29
B Mitophagy factors
C Autophagy-related proteins
D PHATRDRAFT_41667 hypothetical protein K08343 ATG3; ubiquitin-like-conjugating enzyme ATG3
D PHATR_43913 hypothetical protein K08339 ATG5; autophagy-related protein 5
D PHATRDRAFT_31423 hypothetical protein K08334 BECN; beclin
D PHATRDRAFT_43402 hypothetical protein K08334 BECN; beclin
D PHATRDRAFT_9342 hypothetical protein K08337 ATG7; ubiquitin-like modifier-activating enzyme ATG7
D PHATRDRAFT_50303 hypothetical protein K08341 GABARAP; GABA(A) receptor-associated protein
D PHATRDRAFT_36572 hypothetical protein K17907 ATG9; autophagy-related protein 9
D PHATR_44229 hypothetical protein K08330 ATG11; autophagy-related protein 11
D PHATRDRAFT_43401 hypothetical protein K17890 ATG16L1; autophagy-related protein 16-1
C Parkin-dependent mechanism factors
D PHATRDRAFT_49498 hypothetical protein K19513 CLEC16A; protein CLEC16A
D PHATRDRAFT_35318 hypothetical protein K09650 PARL; rhomboid-like protein [EC:3.4.21.105]
D PHATRDRAFT_42687 hypothetical protein K17985 AMBRA1; activating molecule in BECN1-regulated autophagy protein 1
C Parkin-independent mechanism factors
D PHATRDRAFT_5526 hCDK6; hypothetical protein K08269 ULK2; serine/threonine-protein kinase ULK2 [EC:2.7.11.1]
D PHATRDRAFT_55230 hypothetical protein K04079 HSP90A; molecular chaperone HtpG
D PHATRDRAFT_30977 hypothetical protein K09554 CDC37; cell division cycle protein 37
D PHATRDRAFT_bd626 hypothetical protein K09554 CDC37; cell division cycle protein 37
C Other mitophagy factors
D PHATRDRAFT_8773 MARK3; hypothetical protein K07198 PRKAA; 5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.31]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: December 3, 2024