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Mitochondrial Biogenesis - Phenylobacterium zucineum
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AMitochondrial DNA transcription, translation, and replication factors
B Mitochondrial DNA-encoded proteins
C Mitochondrial respiratory chain complex I
C Mitochondrial respiratory chain complex III
C Cytochrome c oxidase
C F-type ATPase
B Mitochondrial transcription and translation factors
C Mitochondrial RNA polymerase
C Mitochondrial transcription factors
C Mitochondrial translation factors
D PHZ_c3439 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D PHZ_c2972 infC; translation initiation factor IF-3 protein K02520 infC; translation initiation factor IF-3
D PHZ_c1779 tsf; elongation factor EF-Ts K02357 tsf; elongation factor Ts
D PHZ_c1210 tufA; translation elongation factor EF-Tu K02358 tuf; elongation factor Tu
D PHZ_c1227 translation elongation factor EF-Tu K02358 tuf; elongation factor Tu
D PHZ_c1226 fusA; translation elongation factor G K02355 fusA; elongation factor G
D PHZ_c0946 translation elongation factors (GTPases) K02355 fusA; elongation factor G
C RNase MRP
C Mitochondrial ribonuclease P
C Other mitochondrial DNA transcription and translation factors
D PHZ_c1662 conserved hypothetical protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D PHZ_c0710 superfamily II DNA and RNA helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:3.6.4.13]
D PHZ_c1869 era; GTP-binding protein Era K03595 era; GTPase
D PHZ_c1835 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D PHZ_c3517 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D PHZ_c1857 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D PHZ_c2895 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D PHZ_c1153 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PHZ_c1324 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PHZ_p0309 putative amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D PHZ_c1326 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D PHZ_c1323 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
B Mitochondrial DNA replication factors
C Mitochondrial DNA polymerase
C Mitochondrial DNA maintenance factors
C Other Mitochondrial DNA replication factors
D PHZ_c1391 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PHZ_c2182 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D PHZ_p0305 single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
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AMitochondrial protein import machinery
B Endoplasmic reticulum membrane and cytosol
C ER-mitochondria encounter structure (ERMES) complex
C Other ER-memrane and cytosol factors
B Outer membrane
C Transporter outer membrane (TOM) complex
C TOB/SAM complex
D PHZ_c1772 outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
C Porin
C ERMES complex
C Other outer membrane factor
B Inter membrane space
C Transporter inner membrane (TIM) 9/10 complex
C TIM8/13 complex
C Mitochondrial intermembrane space assembly (MIA) complex
B Inner mambrane
C MICOS complex
C MICOS complex (yeast)
C TIM22 complex
C TIM23 complex
C Mitochondrial calcium uniporter complex
C Other inner membrane factors
B Matrix
C MMC/PAM proteins
D PHZ_c0055 dnaK; Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D PHZ_p0122 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D PHZ_p0053 dnaK; Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D PHZ_c3469 grpE; Heat-shock protein GrpE(HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE
D PHZ_p0054 Heat shock protein GrpE(HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE
D PHZ_p0121 grpE; Heat-shock protein GrpE(HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE
C Other matrix factors
D PHZ_c3182 groEL; heat shock protein chaperonin, HSP60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PHZ_p0095 groEL; heat shock protein chaperonin, HSP60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D PHZ_c3181 groES; heat shock protein Co-chaperonin,HSP10 K04078 groES; chaperonin GroES
D PHZ_p0096 groES; heat shock protein Co-chaperonin,HSP10 K04078 groES; chaperonin GroES
D PHZ_c0056 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
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AMitochondrial quality control factors
B Regulator of mitochondrial biogenesis
C Ubiquitas transcription factors
D PHZ_c1226 fusA; translation elongation factor G K02355 fusA; elongation factor G
D PHZ_c0946 translation elongation factors (GTPases) K02355 fusA; elongation factor G
C Nuclear respiratory factors
C Coactivators
C Proteins involved in Fe-S cluster biogenesis
D PHZ_c1721 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D PHZ_c0055 dnaK; Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D PHZ_p0122 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D PHZ_p0053 dnaK; Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK
D PHZ_c0999 glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D PHZ_c3178 thioredoxin-like domain protein K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
C Other regulator of mitochondrial biogenesis
B Mitochondrial respiratory chain complex assembly factors
C Complex-I assembly factors
D PHZ_c2859 conserved hypothetical protein K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
D PHZ_c0879 GTP-binding protein, Mrp/Nbp345 family K03593 mrp; ATP-binding protein involved in chromosome partitioning
C Complex-II assembly factors
C Complex-III assembly factors
D PHZ_c1662 conserved hypothetical protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
C Complex-IV assembly factors
D PHZ_c0544 protoheme IX farnesyl transferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D PHZ_c0545 coxG; cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D PHZ_c1654 cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D PHZ_c0390 preprotein translocase subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D PHZ_c0548 surF1 family protein K14998 SURF1; surfeit locus 1 family protein
D PHZ_c0228 uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 SCO1; protein SCO1
C Complex-V assembly factors
B Mitochondrial dynamics
C Fission and Fusion factors
C Actin cytoskeleton organization
C Mitochondrial movement
C Retention of mitochondria
C Morphogenesis factors
B Mitophagy factors
C Autophagy-related proteins
C Parkin-dependent mechanism factors
C Parkin-independent mechanism factors
C Other mitophagy factors
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 14, 2024