+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Rahnella victoriana

% ! AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors D Cap binding complex C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) D Pre-mRNA cleavage factor IIm (CFIIm) D Cleavage and polyadenylation specificity factor (CPSF) complex D Cleavage stimulation factor (CSTF) complex D U7-dependent histone pre-mRNA processing factors D DRB sensitivity inducing factor (DSIF) complex D N6-methyltransferase complex D Poly(A) addition factors D Negative regulators of mRNA 3' end processing C Other processing factors B mRNA surveillance and transport factors C Transport factors D EJC complex D TREX complex D TREX-2 complex D Nuclear pore complex D Ran-mediated transport factors D eIF4F and regulatory proteins D APOBEC1-ACF complex D Other transport factors C Surveillance factors D Surveillance complex D Protein phosphatase 2A D Other surveillance factors C Factors involved in mRNA localization D Cargo complex D Factors that have mRNA localization signals D Trans-acting binding proteins D Other mRNA localization factors C mRNA cycle factors D Common to processing body (P body) and stress granule D P-body specific factors D Stress granule specific factors B mRNA degradation factors C 5'-3' decay D Decapping complex D Lsm complex D 5' exonucleases D Other 5'-3' decay factors C 3'-5' decay D Core exosome factors D Exosome cofactors D TRAMP complex D Ski complex D Ccr4-NOT complex D Pan complex D Other 3'-5' decay factors C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E J9880_00640 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] E J9880_05515 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] E J9880_02900 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] E J9880_09950 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] E J9880_09865 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases E J9880_06845 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] E J9880_01075 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] E J9880_10230 DEAD/DEAH family ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] E J9880_06655 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Other RNA degradosome components E J9880_10860 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E J9880_10220 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E J9880_06835 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho E J9880_07190 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E J9880_04445 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK E J9880_09780 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E J9880_09915 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D Others E J9880_02125 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] E J9880_03845 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] E J9880_11775 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] E J9880_11000 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator E J9880_05540 csrD; RNase E specificity factor CsrD K18765 csrD; RNase E specificity factor CsrD E J9880_07135 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A E J9880_05005 rraB; ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B E J9880_05380 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ E J9880_18980 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] E J9880_03820 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome D Cofactors D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024