+D GENES KO
#
KEGG Orthology (KO) - Thiobacillus denitrificans
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tbd00010]
D Tbd_2062 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Tbd_0974 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tbd_2063 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tbd_1502 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Tbd_2577 cbbF; fructose-1,6-bisphosphatase/sedoheptulose-1,7-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Tbd_1513 fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Tbd_0163 cbbA; Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tbd_1140 cbbJ; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Tbd_0160 cbbG; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tbd_0161 cbbK; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Tbd_2394 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Tbd_0621 enolase (phosphopyruvate hydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tbd_0162 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Tbd_0618 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Tbd_0655 dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Tbd_0654 pyruvate dehydrogenase E1 beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Tbd_0652 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tbd_2468 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Tbd_0504 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Tbd_2138 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:tbd00020]
D Tbd_1187 Citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Tbd_0891 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Tbd_0854 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Tbd_1188 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Tbd_1189 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Tbd_0652 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tbd_0806 succinyl-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Tbd_0805 succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Tbd_1184 succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Tbd_1185 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Tbd_1182 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Tbd_1183 succinate dehydrogenase, cytochrome b subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Tbd_1555 acetyl-CoA carboxylase, biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D Tbd_1556 oxaloacetate decarboxylase, alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D Tbd_0655 dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Tbd_0654 pyruvate dehydrogenase E1 beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Tbd_2468 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:tbd00030]
D Tbd_0974 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tbd_2063 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tbd_2122 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Tbd_2121 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D Tbd_2123 6-phosphogluconate dehydrogenase related protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Tbd_2230 cbbE; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Tbd_0159 cbbT; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tbd_0665 transaldolase subfamily K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Tbd_2364 cbbI; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Tbd_0831 fructose-6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D Tbd_2138 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tbd_2289 guanylate kinase/L-type calcium channel region K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D Tbd_1465 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Tbd_0387 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Tbd_0924 3-oxoacyl-(acyl-carrier protein) reductase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D Tbd_0433 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Tbd_1513 fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Tbd_0163 cbbA; Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tbd_2577 cbbF; fructose-1,6-bisphosphatase/sedoheptulose-1,7-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Tbd_1502 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:tbd00040]
D Tbd_0961 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Tbd_0625 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tbd_2230 cbbE; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Tbd_1226 probable sugar kinase, FGGY family K22935 XK1; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:tbd00051]
D Tbd_2216 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Tbd_1239 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Tbd_2138 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tbd_1776 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Tbd_1775 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Tbd_1502 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Tbd_2577 cbbF; fructose-1,6-bisphosphatase/sedoheptulose-1,7-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Tbd_1513 fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Tbd_0163 cbbA; Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tbd_1140 cbbJ; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Tbd_2412 pentitol phosphotransferase enzyme IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:tbd00052]
D Tbd_0601 galactose-1-phosphate uridyl transferase, class I K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Tbd_2064 nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tbd_1774 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tbd_0625 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tbd_2138 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tbd_2062 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Tbd_1502 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism [PATH:tbd00053]
D Tbd_0961 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Tbd_2699 nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:tbd00500]
D Tbd_0625 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tbd_1881 alpha-D-glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Tbd_1175 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Tbd_2061 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Tbd_2057 glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Tbd_2058 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Tbd_2056 phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Tbd_1172 alpha amylase, catalytic subdomain K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D Tbd_2059 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Tbd_1174 Alpha amylase, catalytic subdomain K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Tbd_1173 alpha amylase, catalytic subdomain K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D Tbd_2138 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tbd_2062 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Tbd_0974 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tbd_2063 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tbd_2216 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tbd00520]
D Tbd_0727 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Tbd_2216 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Tbd_2793 glucosamine-fructose-6-phosphate aminotransferase, isomerising K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tbd_1135 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Tbd_2794 glucoamine-1-phosphate N-acetyltransferase, UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Tbd_0457 conserved hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D Tbd_0945 putative 2-phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D Tbd_2336 domain of unknown function DUF227 K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D Tbd_2335 putative nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D Tbd_1891 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tbd_0121 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Tbd_0286 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Tbd_0099 NAD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D Tbd_0098 UDP-glucose/GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D Tbd_1789 putative alpha-L-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D Tbd_2062 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Tbd_2138 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tbd_0625 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tbd_0961 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Tbd_0601 galactose-1-phosphate uridyl transferase, class I K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Tbd_2064 nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tbd_1774 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tbd_2699 nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Tbd_2412 pentitol phosphotransferase enzyme IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Tbd_0974 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tbd_2063 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tbd_1239 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Tbd_1776 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Tbd_1775 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Tbd_1881 alpha-D-glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Tbd_1880 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D Tbd_1879 putative dehydratase RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D Tbd_2563 NAD(P)H-flavin reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D Tbd_1770 putative flavodoxin oxidoreductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D Tbd_1175 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Tbd_2061 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:tbd00620]
D Tbd_0504 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Tbd_2468 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Tbd_0655 dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Tbd_0654 pyruvate dehydrogenase E1 beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Tbd_0652 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tbd_0832 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Tbd_0162 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Tbd_0588 acetyl-CoA carboxylase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Tbd_0182 acetyl-CoA biotin carboxyl carrier K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Tbd_0181 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Tbd_1912 acetyl-CoA carboxylase carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Tbd_0859 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Tbd_2343 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Tbd_1665 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Tbd_0068 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Tbd_2738 putative metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Tbd_1181 malate dehydrogenase (oxaloacetate-decarboxylating) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Tbd_1555 acetyl-CoA carboxylase, biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D Tbd_1556 oxaloacetate decarboxylase, alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D Tbd_0630 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Tbd_0618 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Tbd_1986 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tbd00630]
D Tbd_0504 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Tbd_1187 Citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D Tbd_0891 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Tbd_0047 glycolate oxidase, subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Tbd_0046 FAD linked oxidase K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D Tbd_0044 glycolate oxidase (iron-sulfur subunit) protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D Tbd_2311 catalase K03781 katE; catalase [EC:1.11.1.6]
D Tbd_1562 putative hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Tbd_2229 cbbZ; 2-phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Tbd_2624 cbbL; ribulose-bisphosphate carboxylase form I large chain K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Tbd_2638 cbbM; ribulose-bisphosphate carboxylase form II K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Tbd_2623 cbbS; ribulose-bisphosphate carboxylase form I small chain K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D Tbd_2509 alanine-glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Tbd_2503 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tbd_2165 glycine/serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tbd_0176 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Tbd_0173 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Tbd_0178 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tbd_0652 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tbd_0177 glycine cleavage system H-protein K02437 gcvH; glycine cleavage system H protein
D Tbd_0081 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D Tbd_0433 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Tbd_1977 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:tbd00640]
D Tbd_0504 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Tbd_0832 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Tbd_0652 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tbd_0588 acetyl-CoA carboxylase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Tbd_0182 acetyl-CoA biotin carboxyl carrier K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Tbd_0181 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Tbd_1912 acetyl-CoA carboxylase carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Tbd_0805 succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Tbd_0806 succinyl-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:tbd00650]
D Tbd_1184 succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Tbd_1185 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Tbd_1182 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Tbd_1183 succinate dehydrogenase, cytochrome b subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Tbd_2468 pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Tbd_1876 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tbd_1991 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tbd_0662 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tbd_1990 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:tbd00660]
D Tbd_1876 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tbd_1991 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tbd_0662 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tbd_1990 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Tbd_0805 succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Tbd_0806 succinyl-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Tbd_1922 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Tbd_1921 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Tbd_1920 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:tbd00562]
D Tbd_0158 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Tbd_1160 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Tbd_1140 cbbJ; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tbd00190]
D Tbd_1142 nuoA; NADH dehydrogenase I chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Tbd_1143 nuoB; NADH dehydrogenase I chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Tbd_1144 nuoC; NADH dehydrogenase I chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Tbd_1145 nuoD; NADH dehydrogenase I chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Tbd_1146 nuoE; NADH dehydrogenase I chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Tbd_1147 nuoF; NADH-quinone oxidoreductase, chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Tbd_1148 nuoG; NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Tbd_1149 nuoH; NADH dehydrogenase I chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Tbd_1150 nuoI; NADH-quinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Tbd_1151 nuoJ; NADH dehydrogenase I chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Tbd_1152 nuoK; NADH dehydrogenase I chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Tbd_1153 nuoL; NADH dehydrogenase I chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Tbd_1154 nuoM; NADH dehydrogenase I chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Tbd_1155 nuoN; NADH dehydrogenase I chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Tbd_2220 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Tbd_1184 succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Tbd_1185 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Tbd_1182 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Tbd_1183 succinate dehydrogenase, cytochrome b subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Tbd_1833 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Tbd_1832 cytochrome B subunit of cytochrome bc1 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Tbd_1831 ubiquinol-cytochrome c reductase cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D Tbd_0335 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Tbd_0330 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Tbd_1970 putative denitrification protein NorE K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Tbd_0326 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Tbd_0325 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Tbd_0328 probable cytochrome C oxidase assembly transmembrane protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D Tbd_0334 putative cytochrome aa3 oxidase assembly protein,related to CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D Tbd_0643 Cytochrome c oxidase cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Tbd_0338 Cytochrome c oxidase cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Tbd_0642 Cytochrome C oxidase, mono-heme subunit/FixO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Tbd_0339 Cytochrome C oxidase, mono-heme subunit/FixO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Tbd_0641 cytochrome c oxidase, subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D Tbd_0640 Cytochrome c oxidase cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Tbd_0341 Cytochrome c oxidase cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Tbd_2726 probable cytochrome C transmembrane protein K08738 CYC; cytochrome c
D Tbd_2799 F-type H+-transporting ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Tbd_2797 F-type H+-transporting ATP synthase, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Tbd_2798 F-type H+-transporting ATP synthase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Tbd_2800 F-type H+-transporting ATP synthase, delta (OSCP) subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Tbd_2796 F-type H+-transporting ATP synthase, delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Tbd_1742 H+-transporting two-sector ATPase, delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Tbd_2803 F-type H+-transporting ATP synthase, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Tbd_2801 F-type H+-transporting ATP synthase, subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Tbd_2802 F-type H+-transporting ATP synthase, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Tbd_1652 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D Tbd_1085 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:tbd00710]
D Tbd_2624 cbbL; ribulose-bisphosphate carboxylase form I large chain K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Tbd_2638 cbbM; ribulose-bisphosphate carboxylase form II K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Tbd_2623 cbbS; ribulose-bisphosphate carboxylase form I small chain K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D Tbd_0161 cbbK; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Tbd_0160 cbbG; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tbd_1513 fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Tbd_0163 cbbA; Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tbd_2577 cbbF; fructose-1,6-bisphosphatase/sedoheptulose-1,7-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Tbd_0159 cbbT; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tbd_2364 cbbI; ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Tbd_2447 cbbP; phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D Tbd_1955 phosphoribulokinase-like protein K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D Tbd_1140 cbbJ; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Tbd_2230 cbbE; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Tbd_0630 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Tbd_1181 malate dehydrogenase (oxaloacetate-decarboxylating) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:tbd00680]
D Tbd_2165 glycine/serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tbd_2509 alanine-glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Tbd_0433 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Tbd_0621 enolase (phosphopyruvate hydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tbd_0630 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Tbd_1513 fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Tbd_0163 cbbA; Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tbd_2577 cbbF; fructose-1,6-bisphosphatase/sedoheptulose-1,7-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Tbd_1502 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Tbd_1645 heterodisulfide reductase, B subunit K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Tbd_1646 heterodisulfide reductase subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Tbd_0832 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Tbd_0504 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Tbd_0618 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Tbd_2394 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Tbd_0950 D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tbd_0949 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:tbd00910]
D Tbd_1401 nitrate/proton symporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Tbd_1402 nitrate/nitrite antiporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Tbd_2272 nitrate transporter periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D Tbd_2273 nitrate transport permease K15577 nrtB; nitrate/nitrite transport system permease protein
D Tbd_2274 nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D Tbd_1403 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Tbd_1404 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Tbd_1406 nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Tbd_2310 assimilatory nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D Tbd_2309 nitrite and sulfite reductase iron-sulfur/siroheme-binding site K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D Tbd_2308 nitrite reductase (NAD(P)H) small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D Tbd_0077 nitrite reductase (NO-forming) K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
D Tbd_0561 nitric-oxide reductase subunit B K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D Tbd_0823 nitric-oxide reductase subunit B K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D Tbd_0822 nitric oxide reductase, cytochrome c-containing subunit K02305 norC; nitric oxide reductase subunit C
D Tbd_0562 nitric-oxide reductase subunit C K02305 norC; nitric oxide reductase subunit C
D Tbd_1389 Nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D Tbd_2188 putative 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Tbd_2182 putative dioxygenase related to 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Tbd_2503 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tbd_2767 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Tbd_2768 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Tbd_1941 cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D Tbd_2167 ecaA; carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:tbd00920]
D Tbd_0874 ATP-sulfurylase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Tbd_0210 sulfate adenylyltranferase, adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Tbd_0872 adenylylsulfate reductase, alpha subunit K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D Tbd_2282 adenylylsulfate reductase, alpha subunit K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D Tbd_0873 adenylylsulfate reductase, beta subunit K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D Tbd_2283 adenylylsulfate reductase, beta subunit K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D Tbd_0570 DMSO reductase chain A K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D Tbd_0571 DMSO reductase chain B K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D Tbd_0572 DMSO reductase chain C K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
D Tbd_0564 sulfur oxidation protein K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D Tbd_0918 sulfur oxidation protein SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D Tbd_0567 sulfur oxidation protein SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D Tbd_0917 sulfur oxidation protein SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D Tbd_0566 transmembrane proetin, twin-arginine translocation pathway signal K17226 soxY; sulfur-oxidizing protein SoxY
D Tbd_0565 conserved hypothetical protein K17227 soxZ; sulfur-oxidizing protein SoxZ
D Tbd_0563 probable sulfur oxidation signal protein, twin-arginine translocation pathway K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D Tbd_1286 putative 5'-nucleotidase/2' 3'-cyclic phosphodiesterase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D Tbd_1292 putative 5'-nucleotidase/2' 3'-cyclic phosphodiesterase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D Tbd_2012 putative esterase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D Tbd_1309 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D Tbd_1369 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D Tbd_2485 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D Tbd_2484 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D Tbd_2477 iron-sulfur cluster-binding protein, GltD family K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit
D Tbd_2479 putative DsrM protein K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D Tbd_2478 reductase, iron-sulfur binding subunit, putative K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D Tbd_2476 hypothetical protein K27189 dsrJ; [DsrC]-trisulfide reductase subunit J
D Tbd_2475 iron-sulfur cluster protein K27190 dsrO; [DsrC]-trisulfide reductase subunit O
D Tbd_2474 molybdopterin oxidoreductase, membrane subunit K27191 dsrP; [DsrC]-trisulfide reductase subunit P
D Tbd_2225 sulfide-quinone reductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Tbd_1407 Sulfide:quinone oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D Tbd_1741 putative tetrathionate reductase, subunit A K08357 ttrA; tetrathionate reductase subunit A
D Tbd_1739 putative tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D Tbd_1740 putative tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D Tbd_2489 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Tbd_1162 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Tbd_0246 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Tbd_1907 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tbd00061]
D Tbd_0588 acetyl-CoA carboxylase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Tbd_0182 acetyl-CoA biotin carboxyl carrier K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Tbd_0181 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Tbd_1912 acetyl-CoA carboxylase carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Tbd_1548 Acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D Tbd_2744 acyl carrier protein, putative K02078 acpP; acyl carrier protein
D Tbd_1550 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Tbd_1551 Beta-ketoacyl-acyl carrier protein synthase III (FabH) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Tbd_2753 probable 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Tbd_1547 3-oxoacyl-(acyl-carrier-protein) synthase I/II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Tbd_2756 3-oxoacyl-(ACP) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tbd_1549 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tbd_0796 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tbd_2747 conserved hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tbd_1672 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Tbd_2597 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tbd00071]
D Tbd_2597 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Tbd_2315 putative rubredoxin reductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tbd00561]
D Tbd_0433 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Tbd_1552 fatty acid synthesis plsX protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Tbd_2382 Protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tbd_2345 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Tbd_0169 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Tbd_0172 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:tbd00564]
D Tbd_2404 glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Tbd_1107 putative ferredoxin K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D Tbd_2382 Protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tbd_2345 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Tbd_0169 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Tbd_0172 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Tbd_1474 phospholipase D/Transphosphatidylase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D Tbd_0096 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D Tbd_2691 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Tbd_0790 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Tbd_1482 CDP-diacylglycerol-serine o-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Tbd_1987 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Tbd_1988 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Tbd_2194 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D Tbd_2243 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Tbd_0446 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Tbd_2007 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D Tbd_0700 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism [PATH:tbd00565]
D Tbd_0096 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D Tbd_1474 phospholipase D/Transphosphatidylase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D Tbd_0096 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D Tbd_0096 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:tbd00592]
D Tbd_0096 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:tbd01040]
D Tbd_2594 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D Tbd_0686 acyl-CoA thioesterase I precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Tbd_2149 putative lipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tbd00230]
D Tbd_0232 conserved hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Tbd_2138 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tbd_1465 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Tbd_0387 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Tbd_1908 amidophosphoribosyl transferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Tbd_2459 phosphoribosylglycinamide synthetase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Tbd_2666 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Tbd_0775 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D Tbd_0629 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D Tbd_2667 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Tbd_2662 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Tbd_2661 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Tbd_0518 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Tbd_2458 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase bifunctional enzyme K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Tbd_0356 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Tbd_0835 acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Tbd_0839 HAD-superfamily hydrolase subfamily IA, variant 3 K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D Tbd_1848 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D Tbd_0811 Protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Tbd_0777 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Tbd_1752 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Tbd_0590 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Tbd_0478 Ham1-like protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Tbd_1751 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Tbd_0473 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Tbd_1976 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Tbd_0058 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Tbd_1975 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Tbd_2171 ribonucleotide reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Tbd_0316 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Tbd_0471 Metal dependent phosphohydrolase, HD region K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Tbd_1046 xopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Tbd_1758 GTP diphosphokinase, RelA/SpoT protein K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D Tbd_0983 adenylyl cyclase class-3/4/guanylyl cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Tbd_0671 Putative Adenylate/Guanylate Cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Tbd_0607 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Tbd_0171 carbohydrate kinase, PfkB family K00856 ADK; adenosine kinase [EC:2.7.1.20]
D Tbd_1504 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Tbd_0168 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D Tbd_0874 ATP-sulfurylase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Tbd_0210 sulfate adenylyltranferase, adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:tbd00240]
D Tbd_1128 Carbamoyl-phosphate synthase, large subunit, glutamine-dependent K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Tbd_1127 Carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Tbd_2582 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Tbd_2583 dihydroorotase multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Tbd_0109 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Tbd_2467 conserved hypothetical protein K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D Tbd_0645 dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D Tbd_0255 orotate phosphoribosyl transferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Tbd_0960 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Tbd_0787 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Tbd_0590 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Tbd_2438 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Tbd_0619 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Tbd_0955 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Tbd_0356 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Tbd_0835 acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Tbd_1848 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D Tbd_2581 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Tbd_0103 transcriptional regulator PyrR, putative K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Tbd_2171 ribonucleotide reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Tbd_2107 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D Tbd_1976 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Tbd_0058 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Tbd_1975 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Tbd_1543 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Tbd_2586 DeoxyUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Tbd_2040 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tbd00250]
D Tbd_1569 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tbd_2096 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Tbd_1931 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Tbd_0292 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Tbd_0298 amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Tbd_0060 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Tbd_0842 probable aspartate transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Tbd_2509 alanine-glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Tbd_0644 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Tbd_2119 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D Tbd_1849 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Tbd_0229 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Tbd_0607 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Tbd_0518 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Tbd_2582 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Tbd_2767 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Tbd_2768 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Tbd_2503 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tbd_1128 Carbamoyl-phosphate synthase, large subunit, glutamine-dependent K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Tbd_1127 Carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Tbd_2793 glucosamine-fructose-6-phosphate aminotransferase, isomerising K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tbd_1908 amidophosphoribosyl transferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tbd00260]
D Tbd_0969 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tbd_1919 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tbd_0843 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Tbd_0844 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Tbd_2165 glycine/serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tbd_2509 alanine-glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Tbd_0433 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Tbd_2394 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Tbd_0950 D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tbd_0949 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Tbd_0669 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Tbd_0176 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Tbd_0173 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Tbd_0178 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tbd_0652 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tbd_0177 glycine cleavage system H-protein K02437 gcvH; glycine cleavage system H protein
D Tbd_1482 CDP-diacylglycerol-serine o-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Tbd_1987 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Tbd_2363 threonine dehydratase I K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Tbd_1913 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Tbd_1914 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Tbd_1773 tryptophan synthase beta chain-like protein K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:tbd00270]
D Tbd_1162 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Tbd_0234 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tbd_2286 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Tbd_2521 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Tbd_2111 conserved hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D Tbd_0811 Protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Tbd_0947 chlorohydrolase/cytosine deaminase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Tbd_0778 probable 5'-methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D Tbd_1810 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Tbd_2519 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Tbd_0969 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tbd_1919 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tbd_0843 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Tbd_0246 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Tbd_1907 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D Tbd_2134 branched-chain amino acid aminotransferase I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tbd_2408 glutamate--cysteine ligase GshA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Tbd_2409 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Tbd_1569 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tbd_2489 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Tbd_0964 Cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D Tbd_0950 D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tbd_0949 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:tbd00280]
D Tbd_2134 branched-chain amino acid aminotransferase I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tbd_0652 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tbd00290]
D Tbd_2363 threonine dehydratase I K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Tbd_1922 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Tbd_1921 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Tbd_1920 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Tbd_1876 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tbd_1991 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tbd_0662 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tbd_1990 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Tbd_1989 acetohydroxy acid isomeroreductase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Tbd_2730 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Tbd_2134 branched-chain amino acid aminotransferase I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tbd_0842 probable aspartate transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Tbd_1986 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:tbd00300]
D Tbd_0843 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Tbd_0969 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tbd_1919 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tbd_1098 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Tbd_1125 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Tbd_1220 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Tbd_1851 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Tbd_1221 N-succinyldiaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Tbd_1271 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Tbd_2526 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Tbd_0717 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Tbd_0226 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Tbd_0114 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Tbd_0115 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:tbd00310]
D Tbd_1189 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Tbd_0652 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tbd_0267 D-alanine transminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:tbd00220]
D Tbd_1850 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Tbd_1849 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Tbd_0229 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Tbd_0069 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D Tbd_2503 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tbd_1569 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tbd_0842 probable aspartate transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Tbd_0154 amino-acid N-acetyltransferase (ArgA) K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D Tbd_0029 glutamate N-acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Tbd_2686 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Tbd_0455 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Tbd_1851 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:tbd00330]
D Tbd_2106 lysine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D Tbd_2111 conserved hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D Tbd_0069 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D Tbd_2417 delta 1-pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Tbd_1120 glutamate 5-kinase, ProB-related K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Tbd_2442 gamma-glutamyl phosphate reductase GPR K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Tbd_0887 peptidase S33, proline iminopeptidase 1 K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Tbd_1569 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tbd_0267 D-alanine transminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:tbd00340]
D Tbd_1890 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Tbd_0606 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Tbd_1706 phosphoribosyl-ATP pyrophosphohydrolase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D Tbd_1707 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D Tbd_1709 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Tbd_1710 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Tbd_1708 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Tbd_1711 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Tbd_1712 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tbd_0952 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tbd_1713 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:tbd00350]
D Tbd_1569 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tbd_1712 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tbd_0952 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tbd_0716 putative aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
C 00360 Phenylalanine metabolism [PATH:tbd00360]
D Tbd_1569 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tbd_1712 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tbd_0952 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tbd_0267 D-alanine transminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Tbd_0271 putative dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:tbd00380]
D Tbd_1189 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Tbd_0652 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tbd_2311 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tbd00400]
D Tbd_0514 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Tbd_1885 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Tbd_0315 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Tbd_0183 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Tbd_2504 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Tbd_0207 shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Tbd_0954 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Tbd_0666 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Tbd_2228 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Tbd_2224 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Tbd_2223 anthranilate phosphoribosyl transferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Tbd_1915 N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Tbd_2222 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Tbd_1913 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Tbd_1914 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Tbd_1773 tryptophan synthase beta chain-like protein K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Tbd_0951 Chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D Tbd_0953 3-phosphoshikimate 1-carboxyvinyltransferase/prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Tbd_1569 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tbd_1712 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tbd_0952 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tbd_2762 conserved hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tbd00410]
D Tbd_2055 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Tbd_2054 pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:tbd00430]
D Tbd_1410 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Tbd_0644 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Tbd_0832 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:tbd00440]
D Tbd_2294 phosphonate metabolism protein K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D Tbd_2296 hypothetical protein K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D Tbd_2295 putative PhnH protein, phosphonate metabolism, function unknown K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D Tbd_2291 ABC phosphonate transport system ATPase K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D Tbd_2290 amidohydrolase-like protein K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D Tbd_2293 phosphonate metabolism protein PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D Tbd_2288 phosphonate metabolism protein, PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:tbd00450]
D Tbd_0234 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tbd_2286 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Tbd_1001 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Tbd_0874 ATP-sulfurylase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Tbd_0210 sulfate adenylyltranferase, adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Tbd_1021 selenide water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Tbd_0860 methionyl-tRNA synthetase, class Ia K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tbd00460]
D Tbd_1410 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Tbd_1931 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Tbd_2165 glycine/serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tbd00470]
D Tbd_2100 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Tbd_0267 D-alanine transminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Tbd_0122 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tbd_1522 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Tbd_0117 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Tbd_2526 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Tbd_0717 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Tbd_0226 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:tbd00480]
D Tbd_1410 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Tbd_2811 conserved hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D Tbd_2813 Conserved hypothetical protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D Tbd_2408 glutamate--cysteine ligase GshA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Tbd_2409 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D Tbd_0580 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Tbd_0656 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Tbd_0899 peptidase M, neutral zinc metallopeptidases, zinc-binding site K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Tbd_0846 probable glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Tbd_1050 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Tbd_0854 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Tbd_2123 6-phosphogluconate dehydrogenase related protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Tbd_2122 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Tbd_2111 conserved hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:tbd00540]
D Tbd_0797 Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Tbd_0126 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Tbd_0795 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Tbd_1905 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Tbd_0798 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Tbd_1508 tetraacyldisaccharide-1-P 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Tbd_0538 capsule expression protein KpsF/GutQ K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Tbd_0620 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Tbd_0537 Phosphatase kdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Tbd_1505 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Tbd_2698 probable 3-deoxy-D-manno-octulosonic-acid transferase transmembrane protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Tbd_2522 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Tbd_2523 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Tbd_1279 conserved hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D Tbd_1514 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D Tbd_0107 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Tbd_0962 RfaE bifunctional protein, domain I K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Tbd_2346 histidinol-phosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Tbd_0741 histidinol-phosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Tbd_0105 Cytidyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D Tbd_0963 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D Tbd_1870 heptosyltransferase family protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tbd00541]
D Tbd_0625 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tbd_2064 nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tbd_1774 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tbd_0961 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Tbd_2699 nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Tbd_1779 glucose-1-phosphate thymidylyltransferase, long form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Tbd_1780 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Tbd_1778 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Tbd_1777 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Tbd_1881 alpha-D-glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Tbd_1880 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D Tbd_1879 putative dehydratase RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D Tbd_2563 NAD(P)H-flavin reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D Tbd_1770 putative flavodoxin oxidoreductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D Tbd_1239 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Tbd_1776 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Tbd_1775 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Tbd_2794 glucoamine-1-phosphate N-acetyltransferase, UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Tbd_0286 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Tbd_1873 putative UDP-glucose 4-epimerase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
D Tbd_0098 UDP-glucose/GDP-mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D Tbd_0099 NAD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:tbd00550]
D Tbd_1891 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tbd_0121 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Tbd_0120 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Tbd_0117 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Tbd_0114 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Tbd_0122 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tbd_0115 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Tbd_0789 di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Tbd_2692 undecaprenyl kinase, bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Tbd_0116 Phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Tbd_0119 N-acetylglucosaminyltransferase, MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Tbd_2505 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Tbd_0201 peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tbd_0263 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Tbd_0113 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Tbd_0647 serine-type D-ala-D-ala-carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tbd_0266 serine-type D-ala-D-ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tbd_0101 peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:tbd00552]
D Tbd_2692 undecaprenyl kinase, bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:tbd00543]
D Tbd_0289 glycosyl transferases group 1 K21001 pslH; polysaccharide biosynthesis protein PslH
D Tbd_1162 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tbd00730]
D Tbd_2694 Thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Tbd_2555 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Tbd_1164 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tbd_1866 putative D-amino acid oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D Tbd_0879 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Tbd_2126 thiamine biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Tbd_2556 thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Tbd_2193 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Tbd_1842 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Tbd_1504 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:tbd00740]
D Tbd_2190 3,4-Dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Tbd_2168 Riboflavin biosynthesis protein RibD diaminohydroxyphosphoribosylaminopyrimid ine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Tbd_2191 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Tbd_2189 Lumazine-binding protein K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Tbd_1856 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Tbd_2717 nitroreductase-like protein K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D Tbd_0232 conserved hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Tbd_0526 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:tbd00750]
D Tbd_0949 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Tbd_2339 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D Tbd_2083 Pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D Tbd_0844 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tbd00760]
D Tbd_2096 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Tbd_0221 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Tbd_0814 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Tbd_0356 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Tbd_0835 acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Tbd_2441 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Tbd_0807 NAD+ synthase (glutamine-hydrolyzing) K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Tbd_2195 CinA protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D Tbd_2031 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:tbd00770]
D Tbd_1876 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tbd_1991 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tbd_0662 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tbd_1990 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Tbd_1989 acetohydroxy acid isomeroreductase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Tbd_2730 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Tbd_2053 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Tbd_2054 pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Tbd_0461 Putative transcriptional acitvator, Baf K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Tbd_2587 DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Tbd_0380 panththeine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Tbd_2367 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Tbd_0728 Holo-acyl carrier protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Tbd_2134 branched-chain amino acid aminotransferase I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tbd_2055 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:tbd00780]
D Tbd_0322 Biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D Tbd_2753 probable 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Tbd_1547 3-oxoacyl-(acyl-carrier-protein) synthase I/II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Tbd_2756 3-oxoacyl-(ACP) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tbd_1549 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tbd_0796 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tbd_2747 conserved hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tbd_1672 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Tbd_0321 BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D Tbd_0320 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Tbd_0093 adenosylmethionine--8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Tbd_0323 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Tbd_0319 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Tbd_0460 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:tbd00785]
D Tbd_0269 Lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Tbd_0274 lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Tbd_0652 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tbd_0655 dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Tbd_0654 pyruvate dehydrogenase E1 beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Tbd_1188 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Tbd_1189 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Tbd_0176 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Tbd_0173 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Tbd_0178 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tbd_0177 glycine cleavage system H-protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tbd00790]
D Tbd_0242 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Tbd_0481 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Tbd_0878 conserved hypothetical protein K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D Tbd_0444 NUDIX hydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D Tbd_2381 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Tbd_2051 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Tbd_1134 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Tbd_2039 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Tbd_1911 folylpolyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Tbd_2190 3,4-Dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Tbd_1546 anthranilate synthase K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D Tbd_1545 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D Tbd_2184 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Tbd_2314 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Tbd_1841 pterin 4 alpha carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Tbd_2642 conserved hypothetical protein K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Tbd_2701 short-chain dehydrogenase/reductase (SDR) superfamily K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D Tbd_2203 radical activating enzyme; radical SAM family K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Tbd_2202 ExsB ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Tbd_1227 conserved hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Tbd_1023 Elongator protein 3/MiaB/NifB K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Tbd_0569 Molybdopterin cofactor biosynthesis MoaC region K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Tbd_1027 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Tbd_2143 molybdopterin binding domain K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Tbd_1025 molybdopterin binding domain K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Tbd_0042 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:tbd00670]
D Tbd_2039 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Tbd_0689 methylenetetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Tbd_2165 glycine/serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tbd_2666 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Tbd_2458 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase bifunctional enzyme K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Tbd_0015 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Tbd_0178 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tbd_0234 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tbd_2040 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Tbd_1977 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D Tbd_2517 5,10-methylenetetrahydrofolate reductase (FADH) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Tbd_2724 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tbd00860]
D Tbd_1734 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tbd_2492 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Tbd_2557 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Tbd_0189 delta-aminolevulinic acid dehydratase, porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Tbd_2568 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Tbd_2567 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Tbd_2779 uroporphyrinogen decarboxylase HemE K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Tbd_2461 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D Tbd_0635 oxygen-independent coproporphyrinogen III oxidase HemN K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D Tbd_2425 probable transmembrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D Tbd_2033 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Tbd_2566 uroporphyrin-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Tbd_2471 uroporphyrin-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D Tbd_0074 Possible Transcriptional Regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D Tbd_0073 Possible Transcriptional Regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D Tbd_0072 Possible Transcriptional Regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D Tbd_0070 nitrite reductase (NO-forming) K24867 nirN; dihydro-heme d1 dehydrogenase
D Tbd_0335 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Tbd_0334 putative cytochrome aa3 oxidase assembly protein,related to CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D Tbd_2473 Cobyrinic acid a,c-diamide synthase CbiA K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Tbd_2718 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Tbd_2714 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Tbd_1044 putative cobalamin biosynthesis transmembrane protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Tbd_2716 cobalamin biosynthesis protein CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Tbd_2715 cobalamin biosynthetic protein CobC K02225 cobC1; cobalamin biosynthesis protein CobC
D Tbd_2713 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Tbd_2710 cobalamin-5-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Tbd_2712 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Tbd_2711 alpha-ribazole-5`-phosphate phosphatase CobC, putative K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D Tbd_1121 alpha-ribazole-5`-phosphate phosphatase CobC, putative K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D Tbd_0688 hypothetical protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D Tbd_0704 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D Tbd_2233 putative bacterioferritin (cytochrome b1) K03594 bfr; bacterioferritin [EC:1.16.3.1]
D Tbd_2643 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tbd00130]
D Tbd_0464 chorismate:pyruvate lyase, 4-hydroxybenzoate synthetase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D Tbd_2762 conserved hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D Tbd_0463 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Tbd_0104 Carboxylyase-related protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D Tbd_0526 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Tbd_2332 ubiquinone biosynthesis hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D Tbd_0946 ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D Tbd_2333 ubiquinone biosynthesis hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D Tbd_2758 methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Tbd_0215 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Tbd_2163 putative ubiquinone biosynthesis monooxygenase Coq7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D Tbd_1979 tryptophan repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tbd00900]
D Tbd_0879 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Tbd_0791 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Tbd_1003 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Tbd_0386 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Tbd_1004 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Tbd_0594 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Tbd_1860 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, LytB protein K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Tbd_0526 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Tbd_0880 polyprenyl synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D Tbd_0863 trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Tbd_0789 di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:tbd00906]
D Tbd_1697 putative terpenoid synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Tbd_0159 cbbT; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:tbd00523]
D Tbd_1779 glucose-1-phosphate thymidylyltransferase, long form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Tbd_1780 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Tbd_1778 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Tbd_1777 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D Tbd_1780 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:tbd00332]
D Tbd_1120 glutamate 5-kinase, ProB-related K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Tbd_2442 gamma-glutamyl phosphate reductase GPR K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:tbd00261]
D Tbd_0874 ATP-sulfurylase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Tbd_0210 sulfate adenylyltranferase, adenylylsulfate kinase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Tbd_0969 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tbd_1919 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tbd_1098 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Tbd_1125 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tbd00521]
D Tbd_2062 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D Tbd_2138 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tbd_0158 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Tbd_1160 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Tbd_1779 glucose-1-phosphate thymidylyltransferase, long form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Tbd_1780 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Tbd_1778 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Tbd_1777 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Tbd_2062 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:tbd00525]
D Tbd_1779 glucose-1-phosphate thymidylyltransferase, long form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Tbd_1780 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:tbd00401]
D Tbd_0953 3-phosphoshikimate 1-carboxyvinyltransferase/prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Tbd_1569 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tbd_1712 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tbd_0952 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Tbd_2228 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Tbd_2224 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Tbd_1550 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Tbd_2756 3-oxoacyl-(ACP) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tbd_1549 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tbd_1672 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Tbd_1548 Acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D Tbd_2744 acyl carrier protein, putative K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tbd00999]
D Tbd_2521 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Tbd_2504 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:tbd00362]
D Tbd_0702 putative isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Tbd_0657 carboxymuconolactone decarboxylase domain protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
C 00627 Aminobenzoate degradation [PATH:tbd00627]
D Tbd_0859 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Tbd_0526 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:tbd00364]
D Tbd_2269 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:tbd00361]
D Tbd_2269 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:tbd00623]
D Tbd_2269 putative dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D Tbd_0702 putative isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:tbd00633]
D Tbd_1375 Ni-Fe hydrogenase large chain K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Tbd_1378 Ni-Fe hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Tbd_1309 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D Tbd_1369 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D Tbd_2485 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D Tbd_2484 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D Tbd_2477 iron-sulfur cluster-binding protein, GltD family K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D Tbd_0702 putative isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tbd03020]
D Tbd_0398 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Tbd_0399 RNA polymerase I subunit A K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Tbd_0430 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Tbd_0472 RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tbd03010]
D Tbd_0956 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Tbd_0785 Ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Tbd_0411 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Tbd_0429 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Tbd_0422 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Tbd_2105 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Tbd_0401 Ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Tbd_0419 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Tbd_0454 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Tbd_0404 Ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Tbd_0428 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Tbd_0400 Ribosomal protein S12m K02950 RP-S12; small subunit ribosomal protein S12
D Tbd_0427 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Tbd_0418 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Tbd_0694 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Tbd_0414 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Tbd_2103 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Tbd_0409 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Tbd_1854 ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D Tbd_2385 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Tbd_0395 Ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Tbd_0408 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Tbd_0405 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Tbd_0406 ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D Tbd_0417 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Tbd_0420 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Tbd_0397 Ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Tbd_2102 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Tbd_0396 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Tbd_0394 Ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Tbd_0453 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Tbd_0415 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Tbd_0424 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Tbd_0412 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Tbd_0431 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Tbd_0421 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Tbd_2376 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Tbd_1010 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Tbd_0864 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Tbd_0410 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Tbd_0407 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D Tbd_0416 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Tbd_0388 Ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D Tbd_0865 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Tbd_2589 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Tbd_0413 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Tbd_0423 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Tbd_0039 Ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Tbd_1553 Ribosomal protein S32 K02911 RP-L32; large subunit ribosomal protein L32
D Tbd_2590 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Tbd_2827 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Tbd_1009 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Tbd_R0041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tbd_R0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tbd_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tbd_R0038 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tbd_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tbd_R0037 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tbd00970]
D Tbd_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tbd_R0052 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tbd_R0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tbd_R0039 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tbd_R0046 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tbd_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tbd_R0017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tbd_R0024 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tbd_R0031 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Tbd_R0032 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Tbd_R0020 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Tbd_R0004 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Tbd_R0045 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tbd_R0021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tbd_R0048 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tbd_R0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tbd_R0016 tRNA-His K14226 tRNA-His; tRNA His
D Tbd_R0010 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Tbd_R0040 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Tbd_R0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tbd_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tbd_R0034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tbd_R0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tbd_R0015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tbd_R0049 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tbd_R0042 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tbd_R0050 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tbd_R0051 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tbd_R0001 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Tbd_R0022 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tbd_R0018 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tbd_R0027 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tbd_R0025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tbd_R0029 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tbd_R0030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tbd_R0007 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tbd_R0036 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tbd_R0043 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tbd_R0008 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Tbd_R0005 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Tbd_R0035 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tbd_R0033 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tbd_R0026 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tbd_1734 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tbd_0258 glutamyl-tRNA(Gln) amidotransferase A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Tbd_0257 glutamyl-tRNA(Gln) amidotransferase B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Tbd_0259 glutamyl-tRNA(Gln) amidotransferase C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Tbd_0850 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Tbd_0553 alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tbd_0442 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tbd_2348 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Tbd_2347 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Tbd_1007 threonyl-tRNA synthetase, class IIa K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Tbd_1229 seryl-tRNA synthetase, class IIa K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Tbd_1902 Cysteinyl-tRNA synthetase, class Ia K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Tbd_0860 methionyl-tRNA synthetase, class Ia K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Tbd_0015 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Tbd_0577 valyl-tRNA synthetase, class Ia K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Tbd_2445 leucyl-tRNA synthetase, class Ia K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tbd_1857 isoleucyl-tRNA synthetase, class Ia K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Tbd_0893 lysyl-tRNA synthetase, class-2 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Tbd_2782 arginyl-tRNA synthetase, class Ic K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tbd_2112 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Tbd_0595 Histidyl-tRNA synthetase, class IIa K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tbd_1011 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Tbd_1012 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Tbd_0459 tyrosyl-tRNA synthetase, class Ib K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tbd_1525 tryptophanyl-tRNA synthetase, class Ib K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tbd03060]
D Tbd_0425 SecY protein K03076 secY; preprotein translocase subunit SecY
D Tbd_0392 SecE subunit of protein translocation complex K03073 secE; preprotein translocase subunit SecE
D Tbd_1141 preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D Tbd_2079 preprotein translocase protein SecD K03072 secD; preprotein translocase subunit SecD
D Tbd_2080 preprotein translocase protein SecF K03074 secF; preprotein translocase subunit SecF
D Tbd_2078 preprotein translocase protein YajC K03210 yajC; preprotein translocase subunit YajC
D Tbd_2825 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tbd_0131 SecA protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tbd_2402 protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D Tbd_2373 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Tbd_R0014 SRP RNA; RNA component of signal recognitionparticle K01983 ffs; SRP RNA
D Tbd_0376 Cell division transporter substrate-binding protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Tbd_1704 twin-arginine translocation protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D Tbd_1703 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D Tbd_1702 Sec-independent periplasmic protein translocase K03118 tatC; sec-independent protein translocase protein TatC
D Tbd_2088 peptidase S26A, signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Tbd_1858 peptidase A8, signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tbd04122]
D Tbd_1164 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tbd_2489 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Tbd_1254 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Tbd_0574 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Tbd_1982 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Tbd_2481 DsrH protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D Tbd_2482 DsrF protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D Tbd_2483 DsrE protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D Tbd_2326 putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D Tbd_1926 putative dissimilatory sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D Tbd_0851 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Tbd_1027 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Tbd_1023 Elongator protein 3/MiaB/NifB K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Tbd_1026 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D Tbd_2448 hypothetical protein K03636 moaD; sulfur-carrier protein
D Tbd_2390 adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Tbd_0569 Molybdopterin cofactor biosynthesis MoaC region K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Tbd_2143 molybdopterin binding domain K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Tbd_2127 thiamine-biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:tbd03018]
D Tbd_2110 conserved hypothetical protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Tbd_1564 ribonuclease E and G K08300 rne; ribonuclease E [EC:3.1.26.12]
D Tbd_0621 enolase (phosphopyruvate hydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tbd_0693 polyribonucleotide nucleotidyltransferase protein K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Tbd_1733 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Tbd_1101 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Tbd_0608 exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Tbd_0896 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Tbd_0037 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Tbd_1538 molecular chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tbd_0091 chaperonin GroEL (Hsp60, Cpn10) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tbd_1533 host factor Hfq protein K03666 hfq; host factor-I protein
D Tbd_1085 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Tbd_2050 poly(A) polymerase, PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tbd03030]
D Tbd_1662 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0827 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0089 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0858 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tbd_0515 DNA polymerase subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tbd_1542 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tbd_2443 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tbd_0579 putative DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Tbd_0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tbd_2101 DnaB helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Tbd_2068 DnaB helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Tbd_2387 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Tbd_0438 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Tbd_1663 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Tbd_0799 ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Tbd_2453 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tbd_0624 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tbd03410]
D Tbd_2021 Endonuclease III/Nth K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Tbd_2130 A/G-specific adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Tbd_0383 formamidopyrimidine-DNA glycolase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Tbd_2436 3-methyladenine DNA glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Tbd_1481 putative phage DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Tbd_0703 conserved hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Tbd_1723 putative phage DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Tbd_2435 exodeoxyribonuclease III xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Tbd_0254 DNA-(apurinic or apyrimidinic site) lyase K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Tbd_2453 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tbd_1771 RecJ exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tbd_0624 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tbd03420]
D Tbd_1656 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Tbd_0436 Excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Tbd_1568 Excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Tbd_0701 Excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Tbd_1306 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tbd_2449 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tbd_2453 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tbd_0624 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:tbd03430]
D Tbd_1159 MutS 1 protein K03555 mutS; DNA mismatch repair protein MutS
D Tbd_1517 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D Tbd_1306 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tbd_2449 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tbd_1511 Exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Tbd_0881 Exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Tbd_1771 RecJ exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tbd_0438 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Tbd_0858 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tbd_0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tbd_0515 DNA polymerase subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tbd_2443 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tbd_1542 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tbd_1662 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0827 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0089 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0579 putative DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Tbd_0624 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:tbd03440]
D Tbd_1771 RecJ exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tbd_0438 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Tbd_2084 Recombination protein O, RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Tbd_0517 RecR protein K06187 recR; recombination protein RecR
D Tbd_2197 RecA DNA recombination protein K03553 recA; recombination protein RecA
D Tbd_2453 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tbd_2213 DNA recombination protein, RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Tbd_2211 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Tbd_2214 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Tbd_0469 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Tbd_2681 Predicted transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Tbd_1077 Predicted transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Tbd_0858 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tbd_0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tbd_0515 DNA polymerase subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tbd_2443 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tbd_1542 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tbd_1662 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0827 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0089 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0579 putative DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Tbd_2781 Primosomal protein n K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Tbd_2104 putative primosomal replication protein K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining [PATH:tbd03450]
D Tbd_2246 putative Ku-like DNA-end-binding protein K10979 ku; DNA end-binding protein Ku
D Tbd_2247 DNA ligase, ATP-dependent, putative K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tbd02010]
D Tbd_2272 nitrate transporter periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D Tbd_2273 nitrate transport permease K15577 nrtB; nitrate/nitrite transport system permease protein
D Tbd_2274 nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D Tbd_1283 molybdenum ABC transporter, periplasmic binding protein K02020 modA; molybdate transport system substrate-binding protein
D Tbd_1284 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D Tbd_1285 molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Tbd_0990 ABC transporter, iron binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D Tbd_0989 iron transport system permease protein K02011 afuB; iron(III) transport system permease protein
D Tbd_0988 transport system ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Tbd_1896 putative signal peptide protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Tbd_1898 putative ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Tbd_0249 ABC-type transport system periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Tbd_0978 ABC-type transport system periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Tbd_1899 Protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Tbd_0247 ABC transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Tbd_0980 ABC-type transport system ipermease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Tbd_1895 NTP binding protein containing STAS domain K07122 mlaB; phospholipid transport system transporter-binding protein
D Tbd_1900 ABC transporter ATPase K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Tbd_1190 ATP-binding ABC transporter protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Tbd_0248 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Tbd_1136 Periplasmic phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Tbd_1420 Periplasmic phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Tbd_1137 phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D Tbd_1138 phosphate transport system permease protein 2 K02038 pstA; phosphate transport system permease protein
D Tbd_1139 phosphate transport system permease protein 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Tbd_2300 Phosphonate-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein
D Tbd_2297 ABC phosphonate permease K02042 phnE; phosphonate transport system permease protein
D Tbd_2298 ABC phosphonate permease K02042 phnE; phosphonate transport system permease protein
D Tbd_2299 ABC phosphate/phosphonate transport system ATPase K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D Tbd_1878 ABC transporter permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D Tbd_1877 ABC transporter ATPase K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Tbd_0276 ABC-2 type transporter, NodJ K09694 nodJ; lipooligosaccharide transport system permease protein
D Tbd_0277 ABC-2 type transporter ATPase K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D Tbd_1761 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Tbd_1760 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Tbd_0581 conserved hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D Tbd_0582 conserved hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D Tbd_0534 ATPase component ABC-type transport system K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Tbd_1393 ABC transporter transmembrane protein K19341 nosY; Cu-processing system permease protein
D Tbd_1392 ABC transporter ATPase K19340 nosF; Cu-processing system ATP-binding protein
D Tbd_0374 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Tbd_0375 Cell division ATP-binding protein FtsE, ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D Tbd_2507 lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Tbd_1273 ABC-type transport system ATPase K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
C 02060 Phosphotransferase system (PTS) [PATH:tbd02060]
D Tbd_2414 Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Tbd_2413 HPrNtr K02784 ptsH; phosphocarrier protein HPr
D Tbd_2412 pentitol phosphotransferase enzyme IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Tbd_0531 Possible PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:tbd03070]
D Tbd_2697 type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Tbd_1897 putative Outer membrane protein K12340 tolC; outer membrane protein
D Tbd_2321 putative secretion protein K12340 tolC; outer membrane protein
D Tbd_1300 type II secretion system protein D K02453 gspD; general secretion pathway protein D
D Tbd_1439 type II secretion system protein D K02453 gspD; general secretion pathway protein D
D Tbd_0549 putative Type II secretory pathway component PulD K02453 gspD; general secretion pathway protein D
D Tbd_1294 type II secretion system protein F K02455 gspF; general secretion pathway protein F
D Tbd_1433 type II secretion system protein F K02455 gspF; general secretion pathway protein F
D Tbd_1301 type II secretion system protein K02456 gspG; general secretion pathway protein G
D Tbd_1440 type II secretion system transmembrane protein K02456 gspG; general secretion pathway protein G
D Tbd_1441 type II secretion system protein G K02456 gspG; general secretion pathway protein G
D Tbd_1293 tyep II secretion system protein G K02456 gspG; general secretion pathway protein G
D Tbd_1432 type II secretion systen protein G K02456 gspG; general secretion pathway protein G
D Tbd_1302 type II secretion system protein K02456 gspG; general secretion pathway protein G
D Tbd_1295 type II secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Tbd_1434 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Tbd_2079 preprotein translocase protein SecD K03072 secD; preprotein translocase subunit SecD
D Tbd_2080 preprotein translocase protein SecF K03074 secF; preprotein translocase subunit SecF
D Tbd_0392 SecE subunit of protein translocation complex K03073 secE; preprotein translocase subunit SecE
D Tbd_1141 preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D Tbd_0425 SecY protein K03076 secY; preprotein translocase subunit SecY
D Tbd_2078 preprotein translocase protein YajC K03210 yajC; preprotein translocase subunit YajC
D Tbd_2825 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tbd_0131 SecA protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tbd_0376 Cell division transporter substrate-binding protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Tbd_2402 protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D Tbd_2373 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Tbd_1704 twin-arginine translocation protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D Tbd_1703 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D Tbd_1702 Sec-independent periplasmic protein translocase K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tbd02020]
D Tbd_0217 PAS/PAC Sensor Signal Transduction Histidine Kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Tbd_0216 Two component Transcriptional regulator, Winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Tbd_1136 Periplasmic phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Tbd_1420 Periplasmic phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Tbd_2353 Periplasmic Sensor Signal Transduction Histidine Kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Tbd_1288 Periplasmic Sensor Signal Transduction Histidine Kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Tbd_1287 Two component Transcriptional regulator, Winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Tbd_2091 peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Tbd_1750 Multi-sensor Signal Transduction Histidine Kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Tbd_1749 Two component Heavy metal response Transcriptional regulator, Winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Tbd_1326 conserved hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D Tbd_1332 conserved hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D Tbd_1334 Secretion protein HlyD K07798 cusB; membrane fusion protein, copper/silver efflux system
D Tbd_0901 Secretion protein HlyD K07798 cusB; membrane fusion protein, copper/silver efflux system
D Tbd_1333 heavy metal efflux pump CzcA K07787 cusA; copper/silver efflux system protein
D Tbd_2792 Periplasmic Sensor Signal Transduction Histidine Kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Tbd_2791 Two component Transcriptional regulator, Winged helix family K07666 qseB; two-component system, OmpR family, response regulator QseB
D Tbd_1240 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D Tbd_1241 flagellar regulon master regulator subunit FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Tbd_1590 flagellin FliC K02406 fliC; flagellin
D Tbd_1249 RNA polymerase sigma-70 factor K02405 fliA; RNA polymerase sigma factor FliA
D Tbd_1180 RNA polymerase sigma-70 factor K02405 fliA; RNA polymerase sigma factor FliA
D Tbd_1243 probable chemotaxis transmembrane protein MotA K02556 motA; chemotaxis protein MotA
D Tbd_1250 chemotaxis transmembrane protein MotA K02556 motA; chemotaxis protein MotA
D Tbd_0348 Two component Transcriptional regulator, Winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Tbd_0334 putative cytochrome aa3 oxidase assembly protein,related to CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D Tbd_0001 chromosomal replication initiator protein, DnaA K02313 dnaA; chromosomal replication initiator protein
D Tbd_0230 two-component system sensor ATPase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D Tbd_0231 Response regulator receiver domain protein (CheY) K08083 algR; two-component system, LytTR family, response regulator AlgR
D Tbd_1400 Periplasmic Sensor Signal Transduction Histidine Kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Tbd_2463 GAF Sensor Signal Transduction Histidine Kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Tbd_2464 Two Component Transcriptional Regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Tbd_1399 Two Component Transcriptional Regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Tbd_2786 Two Component Transcriptional Regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Tbd_1403 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Tbd_1404 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Tbd_1406 nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Tbd_1405 nitrate reductase, delta subunit K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D Tbd_1587 Possible Sensor with PAS/PAC domain K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Tbd_1588 Two Component Transcriptional Regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Tbd_2237 Two Component Transcriptional Regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Tbd_0783 Metal dependent phosphohydrolase, HD region K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D Tbd_0808 Nitrogen regulatory protein P-II (GlnB, GlnK) K04751 glnB; nitrogen regulatory protein P-II 1
D Tbd_2501 PAS/PAC Sensor Signal Transduction Histidine Kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Tbd_2500 Two Component Transcriptional Regulator, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Tbd_2503 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tbd_0018 Multi-sensor Signal Transduction Histidine Kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Tbd_0019 Two Component Transcriptional Regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D Tbd_1806 Periplasmic Sensor Signal Transduction Histidine Kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Tbd_1807 Two Component Transcriptional Regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR
D Tbd_0533 Sigma-54 factor transcription regulator protein K03092 rpoN; RNA polymerase sigma-54 factor
D Tbd_0732 RNA polymease sigma-54 factor protein K03092 rpoN; RNA polymerase sigma-54 factor
D Tbd_2200 pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA
D Tbd_2769 Periplasmic Sensor Signal Transduction Histidine Kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Tbd_2771 Two Component Transcriptional Regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR
D Tbd_1378 Ni-Fe hydrogenase, small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Tbd_1375 Ni-Fe hydrogenase large chain K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Tbd_0139 cytochrome b, putative K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D Tbd_1617 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Tbd_1619 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tbd_1620 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tbd_0660 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tbd_1622 chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Tbd_2406 chemotaxis sensory transducer K03776 aer; aerotaxis receptor
D Tbd_1618 chemotaxis sensory transducer K03776 aer; aerotaxis receptor
D Tbd_1623 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Tbd_1624 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tbd_1614 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tbd_1625 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tbd_1615 Response regulator receiver domain protein (CheY) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tbd_1598 CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Tbd_2549 chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D Tbd_2550 twitching motility protein PilI K02659 pilI; twitching motility protein PilI
D Tbd_2548 CheA Signal Transduction Histidine Kinases (STHK) K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D Tbd_2552 Response regulator receiver domain protein (CheY) K02657 pilG; twitching motility two-component system response regulator PilG
D Tbd_2551 Response regulator receiver domain protein (CheY) K02658 pilH; twitching motility two-component system response regulator PilH
D Tbd_0468 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Tbd_1744 Histidine Kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D Tbd_1741 putative tetrathionate reductase, subunit A K08357 ttrA; tetrathionate reductase subunit A
D Tbd_1739 putative tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D Tbd_1740 putative tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D Tbd_1743 Two Component Transcriptional Regulator, LuxR family K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D Tbd_2671 Periplasmic Sensor Hybrid Histidine Kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D Tbd_2670 Metal dependent phosphohydrolase, HD region K13815 rpfG; two-component system, response regulator RpfG
D Tbd_2672 putative RpfF protein K13816 rpfF; DSF synthase
D Tbd_2689 Periplasmic Sensor Signal Transduction Histidine Kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Tbd_2690 Two Component Transcriptional Regulator, Fis family K15012 regA; two-component system, response regulator RegA
D Tbd_1833 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D Tbd_1832 cytochrome B subunit of cytochrome bc1 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Tbd_1831 ubiquinol-cytochrome c reductase cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D Tbd_2726 probable cytochrome C transmembrane protein K08738 CYC; cytochrome c
D Tbd_0643 Cytochrome c oxidase cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Tbd_0338 Cytochrome c oxidase cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Tbd_0642 Cytochrome C oxidase, mono-heme subunit/FixO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Tbd_0339 Cytochrome C oxidase, mono-heme subunit/FixO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Tbd_0641 cytochrome c oxidase, subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D Tbd_0640 Cytochrome c oxidase cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Tbd_0341 Cytochrome c oxidase cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D Tbd_2697 type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Tbd_1897 putative Outer membrane protein K12340 tolC; outer membrane protein
D Tbd_2321 putative secretion protein K12340 tolC; outer membrane protein
D Tbd_1795 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D Tbd_0281 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D Tbd_1565 Protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D Tbd_0286 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Tbd_1658 Putative Anti-Sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Tbd_1639 Putative Anti-Sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:tbd04148]
D Tbd_0069 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D Tbd_1833 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tbd02024]
D Tbd_1533 host factor Hfq protein K03666 hfq; host factor-I protein
D Tbd_2228 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Tbd_2224 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Tbd_0514 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Tbd_2792 Periplasmic Sensor Signal Transduction Histidine Kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Tbd_2791 Two component Transcriptional regulator, Winged helix family K07666 qseB; two-component system, OmpR family, response regulator QseB
D Tbd_2769 Periplasmic Sensor Signal Transduction Histidine Kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Tbd_2771 Two Component Transcriptional Regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR
D Tbd_1240 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D Tbd_1241 flagellar regulon master regulator subunit FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Tbd_0348 Two component Transcriptional regulator, Winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Tbd_1819 hypothetical protein K20266 trbJ; type IV secretion system protein TrbJ
D Tbd_2672 putative RpfF protein K13816 rpfF; DSF synthase
D Tbd_2597 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Tbd_2671 Periplasmic Sensor Hybrid Histidine Kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D Tbd_2670 Metal dependent phosphohydrolase, HD region K13815 rpfG; two-component system, response regulator RpfG
D Tbd_2168 Riboflavin biosynthesis protein RibD diaminohydroxyphosphoribosylaminopyrimid ine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase protein K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Tbd_1416 RND efflux system outer membrane lipoprotein NodT K18139 oprM; outer membrane protein, multidrug efflux system
D Tbd_1671 oligopeptide ABC transporter periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tbd_1670 oligopeptide ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tbd_1669 oligopeptide ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tbd_1668 oligopeptidee ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tbd_2825 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tbd_0392 SecE subunit of protein translocation complex K03073 secE; preprotein translocase subunit SecE
D Tbd_1141 preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D Tbd_0425 SecY protein K03076 secY; preprotein translocase subunit SecY
D Tbd_2078 preprotein translocase protein YajC K03210 yajC; preprotein translocase subunit YajC
D Tbd_0131 SecA protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tbd_0376 Cell division transporter substrate-binding protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Tbd_2402 protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D Tbd_2373 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:tbd02030]
D Tbd_1619 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tbd_1620 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tbd_0660 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tbd_1622 chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Tbd_2406 chemotaxis sensory transducer K03776 aer; aerotaxis receptor
D Tbd_1618 chemotaxis sensory transducer K03776 aer; aerotaxis receptor
D Tbd_1624 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tbd_1623 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Tbd_1614 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tbd_1625 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tbd_1613 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D Tbd_1615 Response regulator receiver domain protein (CheY) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tbd_1598 CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Tbd_1616 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Tbd_1617 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Tbd_1089 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tbd_1601 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tbd_1607 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Tbd_1608 flagellar motor switch/type III secretory pathway protein FliN K02417 fliN; flagellar motor switch protein FliN
D Tbd_1243 probable chemotaxis transmembrane protein MotA K02556 motA; chemotaxis protein MotA
D Tbd_1250 chemotaxis transmembrane protein MotA K02556 motA; chemotaxis protein MotA
D Tbd_1244 outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D Tbd_1251 outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:tbd02040]
D Tbd_1599 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Tbd_1088 flagellar biosynthesis/type III secretory pathway lipoprotein FliF K02409 fliF; flagellar M-ring protein FliF
D Tbd_1600 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Tbd_1089 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tbd_1601 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tbd_1090 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Tbd_1602 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Tbd_1603 flagellar biosynthesis/type III secretory pathway ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tbd_1091 flagella ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tbd_1604 flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D Tbd_1605 putative flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D Tbd_1606 probable flagellar transmembrane protein FliL K02415 fliL; flagellar protein FliL
D Tbd_1607 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Tbd_1608 flagellar motor switch/type III secretory pathway protein FliN K02417 fliN; flagellar motor switch protein FliN
D Tbd_1094 probable Flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Tbd_1609 flagellar biogenesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Tbd_1610 flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tbd_1095 flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tbd_1096 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tbd_1611 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tbd_1612 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Tbd_1097 probable flagellar biosynthetic fliR transmembrane protein K02421 fliR; flagellar biosynthesis protein FliR
D Tbd_1246 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tbd_1177 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tbd_1245 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tbd_1176 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tbd_1638 putative flagella basal body P-ring formation protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Tbd_1637 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Tbd_1636 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Tbd_1635 flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D Tbd_1634 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D Tbd_1633 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Tbd_1632 flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Tbd_1631 flagellar L-ring protein precursor FlgH K02393 flgH; flagellar L-ring protein FlgH
D Tbd_1630 flagellar P-ring protein precursor FlgI K02394 flgI; flagellar P-ring protein FlgI
D Tbd_1629 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D Tbd_1628 Flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D Tbd_1627 flagellin, flagellar hook-associated protein 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D Tbd_1590 flagellin FliC K02406 fliC; flagellin
D Tbd_1592 flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D Tbd_1593 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Tbd_1594 flagellar protein FliT K02423 fliT; flagellar protein FliT
D Tbd_1243 probable chemotaxis transmembrane protein MotA K02556 motA; chemotaxis protein MotA
D Tbd_1250 chemotaxis transmembrane protein MotA K02556 motA; chemotaxis protein MotA
D Tbd_1244 outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D Tbd_1251 outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D Tbd_1658 Putative Anti-Sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Tbd_1639 Putative Anti-Sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Tbd_1640 putative flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D Tbd_2388 Carbamoyl-phosphate synthase L chain, ATP-binding K03086 rpoD; RNA polymerase primary sigma factor
D Tbd_1240 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D Tbd_1241 flagellar regulon master regulator subunit FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Tbd_0533 Sigma-54 factor transcription regulator protein K03092 rpoN; RNA polymerase sigma-54 factor
D Tbd_0732 RNA polymease sigma-54 factor protein K03092 rpoN; RNA polymerase sigma-54 factor
D Tbd_1249 RNA polymerase sigma-70 factor K02405 fliA; RNA polymerase sigma factor FliA
D Tbd_1180 RNA polymerase sigma-70 factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Tbd_0621 enolase (phosphopyruvate hydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D Tbd_0234 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tbd01501]
D Tbd_0253 putative transport transmembrane protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Tbd_0727 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Tbd_1418 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Tbd_1417 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump
D Tbd_1416 RND efflux system outer membrane lipoprotein NodT K18139 oprM; outer membrane protein, multidrug efflux system
D Tbd_2697 type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Tbd_1897 putative Outer membrane protein K12340 tolC; outer membrane protein
D Tbd_2321 putative secretion protein K12340 tolC; outer membrane protein
D Tbd_0201 peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tbd_0263 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Tbd_0113 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tbd01502]
D Tbd_0122 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tbd_2100 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Tbd_0115 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Tbd_0116 Phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Tbd_0119 N-acetylglucosaminyltransferase, MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tbd01503]
D Tbd_1519 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tbd_2091 peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Tbd_2784 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D Tbd_1418 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Tbd_1417 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump
D Tbd_2697 type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Tbd_1897 putative Outer membrane protein K12340 tolC; outer membrane protein
D Tbd_2321 putative secretion protein K12340 tolC; outer membrane protein
D Tbd_0797 Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tbd01000]
C 01001 Protein kinases [BR:tbd01001]
D Tbd_0611 Protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D Tbd_1700 Serine/Threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Tbd_1793 conserved hypothetical protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Tbd_0283 protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Tbd_0217 PAS/PAC Sensor Signal Transduction Histidine Kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Tbd_2353 Periplasmic Sensor Signal Transduction Histidine Kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Tbd_1288 Periplasmic Sensor Signal Transduction Histidine Kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Tbd_1750 Multi-sensor Signal Transduction Histidine Kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Tbd_2792 Periplasmic Sensor Signal Transduction Histidine Kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Tbd_0135 Periplasmic Sensor Signal Transduction Histidine Kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Tbd_1400 Periplasmic Sensor Signal Transduction Histidine Kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Tbd_2463 GAF Sensor Signal Transduction Histidine Kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Tbd_1587 Possible Sensor with PAS/PAC domain K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Tbd_0230 two-component system sensor ATPase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D Tbd_2501 PAS/PAC Sensor Signal Transduction Histidine Kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Tbd_0018 Multi-sensor Signal Transduction Histidine Kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Tbd_1806 Periplasmic Sensor Signal Transduction Histidine Kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Tbd_2769 Periplasmic Sensor Signal Transduction Histidine Kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Tbd_1624 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tbd_2548 CheA Signal Transduction Histidine Kinases (STHK) K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D Tbd_1744 Histidine Kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D Tbd_2671 Periplasmic Sensor Hybrid Histidine Kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D Tbd_2689 Periplasmic Sensor Signal Transduction Histidine Kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tbd01009]
D Tbd_2519 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Tbd_1078 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D Tbd_0476 Protein serine/threonine phosphatases K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:tbd01002]
D Tbd_1858 peptidase A8, signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Tbd_2368 prepilin cysteine protease (C20) PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tbd_1380 peptidase M52, hydrogen uptake protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Tbd_1751 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Tbd_1908 amidophosphoribosyl transferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Tbd_2767 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Tbd_2793 glucosamine-fructose-6-phosphate aminotransferase, isomerising K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tbd_0292 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Tbd_0298 amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Tbd_0060 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Tbd_1845 putative protease K03152 thiJ; protein deglycase [EC:3.5.1.124]
D Tbd_1797 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D Tbd_0899 peptidase M, neutral zinc metallopeptidases, zinc-binding site K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Tbd_2433 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D Tbd_0377 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Tbd_0378 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Tbd_0580 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Tbd_0656 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Tbd_1271 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Tbd_0784 peptidase M24A, methionine aminopeptidase, subfamily 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Tbd_2334 putative XAA-PRO aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Tbd_1133 peptidase M41, FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Tbd_2603 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Tbd_0568 putative peptidase family M48 protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D Tbd_0792 peptidase M50, putative membrane-associated zinc metallopeptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Tbd_0769 conserved hypothetical protein K09933 mtfA; MtfA peptidase
D Tbd_2091 peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Tbd_1834 putative protease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D Tbd_0647 serine-type D-ala-D-ala-carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tbd_0266 serine-type D-ala-D-ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tbd_0083 D-alanyl-D-alanine carboxypeptidase-like protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D Tbd_0101 peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Tbd_1677 peptidase S14, ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Tbd_1675 peptidase S16, ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Tbd_1252 peptidase S16, ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Tbd_1483 peptidase S24, LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D Tbd_2088 peptidase S26A, signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Tbd_0887 peptidase S33, proline iminopeptidase 1 K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Tbd_2392 peptidase S41A, protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Tbd_1560 protease K04773 sppA; protease IV [EC:3.4.21.-]
D Tbd_2629 serine protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D Tbd_2541 putative heat shock protein K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Tbd_1931 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Tbd_1410 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Tbd_1033 probable collagenase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D Tbd_2185 conserved hypothetical protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D Tbd_2186 putative protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D Tbd_2148 Zn-dependent protease, modulator of DNA gyrase K03592 pmbA; PmbA protein
D Tbd_0512 putative modulator of DNA gyrase K03568 tldD; TldD protein
D Tbd_0604 HflC K04087 hflC; modulator of FtsH protease HflC
D Tbd_0603 HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:tbd01003]
D Tbd_0302 glycosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D Tbd_2057 glycogen/starch synthases, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Tbd_2505 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Tbd_0201 peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tbd_0289 glycosyl transferases group 1 K21001 pslH; polysaccharide biosynthesis protein PslH
D Tbd_1312 probable periplasmic glucans biosynthesis transmembrane protein K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D Tbd_1304 cyclic beta 1-2 glucan synthetase K13688 chvB; cyclic beta-1,2-glucan synthetase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tbd01005]
D Tbd_0797 Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Tbd_0798 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Tbd_0126 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Tbd_0795 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Tbd_1905 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Tbd_1508 tetraacyldisaccharide-1-P 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Tbd_2522 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Tbd_2523 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Tbd_1279 conserved hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D Tbd_2698 probable 3-deoxy-D-manno-octulosonic-acid transferase transmembrane protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Tbd_1514 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D Tbd_0620 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Tbd_1505 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Tbd_0537 Phosphatase kdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Tbd_0538 capsule expression protein KpsF/GutQ K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Tbd_0962 RfaE bifunctional protein, domain I K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Tbd_0105 Cytidyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D Tbd_1870 heptosyltransferase family protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D Tbd_0107 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Tbd_2346 histidinol-phosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Tbd_0741 histidinol-phosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Tbd_0963 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tbd01011]
D Tbd_1891 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tbd_0121 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Tbd_0120 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Tbd_0117 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Tbd_0114 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Tbd_0122 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tbd_2100 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Tbd_1522 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Tbd_0116 Phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Tbd_0119 N-acetylglucosaminyltransferase, MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Tbd_2692 undecaprenyl kinase, bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Tbd_1855 virulence factor MVIN-like protein K03980 murJ; putative peptidoglycan lipid II flippase
D Tbd_0201 peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tbd_0263 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Tbd_0113 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Tbd_0647 serine-type D-ala-D-ala-carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tbd_0266 serine-type D-ala-D-ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tbd_0101 peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D Tbd_0083 D-alanyl-D-alanine carboxypeptidase-like protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D Tbd_2505 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Tbd_2362 SLT domain protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Tbd_2232 membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D Tbd_0061 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D Tbd_1666 peptidoglycan-binding protein LysM K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D Tbd_1230 extracellular solute-binding protein, family 3 K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D Tbd_1544 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Tbd_0265 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Tbd_1519 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tbd_0776 N-acetylmuramoyl-L-alanine amidase, family 2 K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:tbd01004]
D Tbd_1550 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Tbd_1551 Beta-ketoacyl-acyl carrier protein synthase III (FabH) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Tbd_2753 probable 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D Tbd_1547 3-oxoacyl-(acyl-carrier-protein) synthase I/II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Tbd_2756 3-oxoacyl-(ACP) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tbd_1549 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tbd_0796 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tbd_2747 conserved hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tbd_1672 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Tbd_0686 acyl-CoA thioesterase I precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Tbd_2149 putative lipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Tbd_2594 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D Tbd_0504 acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Tbd_2597 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Tbd_1552 fatty acid synthesis plsX protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Tbd_2382 Protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tbd_2345 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Tbd_0169 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:tbd01006]
D Tbd_0880 polyprenyl synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D Tbd_0863 trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Tbd_0789 di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Tbd_1697 putative terpenoid synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D Tbd_1512 tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Tbd_0463 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Tbd_0335 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:tbd01007]
D Tbd_1734 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tbd_0850 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Tbd_2709 glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Tbd_0459 tyrosyl-tRNA synthetase, class Ib K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tbd_1525 tryptophanyl-tRNA synthetase, class Ib K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Tbd_1902 Cysteinyl-tRNA synthetase, class Ia K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Tbd_2782 arginyl-tRNA synthetase, class Ic K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tbd_0860 methionyl-tRNA synthetase, class Ia K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Tbd_1857 isoleucyl-tRNA synthetase, class Ia K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Tbd_0577 valyl-tRNA synthetase, class Ia K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Tbd_2445 leucyl-tRNA synthetase, class Ia K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tbd_0893 lysyl-tRNA synthetase, class-2 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Tbd_0442 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tbd_0595 Histidyl-tRNA synthetase, class IIa K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tbd_2348 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Tbd_2347 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Tbd_1229 seryl-tRNA synthetase, class IIa K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Tbd_2112 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Tbd_1007 threonyl-tRNA synthetase, class IIa K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Tbd_0553 alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tbd_1011 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Tbd_1012 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Tbd_1569 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Tbd_0842 probable aspartate transaminase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Tbd_1221 N-succinyldiaminopimelate aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D Tbd_1712 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tbd_0952 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tbd_0669 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Tbd_0320 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Tbd_1851 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Tbd_0093 adenosylmethionine--8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Tbd_2557 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Tbd_0267 D-alanine transminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D Tbd_2134 branched-chain amino acid aminotransferase I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tbd_2509 alanine-glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Tbd_0949 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:tbd00194]
D Tbd_1484 hypothetical protein K08906 petJ; cytochrome c6
D Tbd_2796 F-type H+-transporting ATP synthase, delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Tbd_1742 H+-transporting two-sector ATPase, delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Tbd_2797 F-type H+-transporting ATP synthase, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Tbd_2798 F-type H+-transporting ATP synthase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Tbd_2799 F-type H+-transporting ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Tbd_2800 F-type H+-transporting ATP synthase, delta (OSCP) subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Tbd_2801 F-type H+-transporting ATP synthase, subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Tbd_2802 F-type H+-transporting ATP synthase, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Tbd_2803 F-type H+-transporting ATP synthase, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Tbd_2804 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tbd03000]
D Tbd_1810 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Tbd_2285 Possible Transcriptional Regulator, Fis family K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D Tbd_2604 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D Tbd_2323 oxidative stress transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D Tbd_2625 cbbR1; transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Tbd_2651 cbbR3; transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Tbd_2639 cbbR2; transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D Tbd_2328 probable transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D Tbd_2301 Transcriptional Regulator, GntR family K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D Tbd_2389 Possible Transcriptional Regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D Tbd_1255 Possible Transcriptional Regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Tbd_0482 Possible Transcriptional Regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D Tbd_1419 Possible Transcriptional Regulator, TetR family K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D Tbd_1984 Possible Transcriptional Regulator, TetR family K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
D Tbd_1338 Transcriptional Regulator, MerR family K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D Tbd_2267 Transcriptional Regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Tbd_1123 Possible Ferric uptake regulator (FUR) family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Tbd_1714 Possible Ferric uptake regulator (FUR) family K09826 irr; Fur family transcriptional regulator, iron response regulator
D Tbd_2593 Transcriptional Regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D Tbd_0079 Transcriptional Regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D Tbd_1163 Iron-sulphur cluster assembly transcription factor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Tbd_0336 Protein of unknown function UPF0074 K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Tbd_2014 Protein of unknown function UPF0074 K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D Tbd_1424 Putative Transcriptional Regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Tbd_1736 Putative Transcriptional Regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Tbd_0460 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Tbd_2457 Transcriptional Regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Tbd_1034 molybdenum-pterin-binding protein, molybdate transport system regulatory protein K02019 modE; molybdate transport system regulatory protein
D Tbd_1390 probable transmembrane regulatory nosR transcription regulator protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D Tbd_0078 regulator of nitric oxide reductase transcription K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D Tbd_1531 putative stress-induced morphogen BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D Tbd_2805 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Tbd_2032 Negative regulator of class I heat shock protein K03705 hrcA; heat-inducible transcriptional repressor
D Tbd_0052 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D Tbd_0066 GreA/GreB family elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase
D Tbd_2581 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Tbd_0103 transcriptional regulator PyrR, putative K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Tbd_2822 Possible Transcriptional Regulator K07733 alpA; prophage regulatory protein
D Tbd_2677 Possible Transcriptional Regulator K07733 alpA; prophage regulatory protein
D Tbd_2579 conserved hypothetical protein K07735 algH; putative transcriptional regulator
D Tbd_0691 Transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Tbd_2533 Transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Tbd_2166 Protein of unknown function DUF193 K07738 nrdR; transcriptional repressor NrdR
D Tbd_0110 Protein of unknown function UPF0040 K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:tbd03021]
D Tbd_0430 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Tbd_0398 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Tbd_0399 RNA polymerase I subunit A K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Tbd_0472 RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Tbd_2388 Carbamoyl-phosphate synthase L chain, ATP-binding K03086 rpoD; RNA polymerase primary sigma factor
D Tbd_0838 RNA polymerase sigma-70 factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D Tbd_1836 Sigma-24 (FecI) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Tbd_2095 Sigma-24 (FecI) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Tbd_1654 Sigma-24 (FecI) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Tbd_0345 sigma-70 factor K03089 rpoH; RNA polymerase sigma-32 factor
D Tbd_0533 Sigma-54 factor transcription regulator protein K03092 rpoN; RNA polymerase sigma-54 factor
D Tbd_0732 RNA polymease sigma-54 factor protein K03092 rpoN; RNA polymerase sigma-54 factor
D Tbd_1249 RNA polymerase sigma-70 factor K02405 fliA; RNA polymerase sigma factor FliA
D Tbd_1180 RNA polymerase sigma-70 factor K02405 fliA; RNA polymerase sigma factor FliA
D Tbd_0698 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Tbd_2192 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Tbd_0393 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Tbd_1830 stringent starvation protein a K03599 sspA; stringent starvation protein A
D Tbd_1829 stringent starvation protein B K03600 sspB; stringent starvation protein B
D Tbd_2094 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D Tbd_2093 Putative Sigma E regulatory protein, MucB/RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D Tbd_2092 putative positive regulator of sigma E activity K03803 rseC; sigma-E factor negative regulatory protein RseC
D Tbd_0691 Transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Tbd_2533 Transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Tbd_1129 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
D Tbd_0520 GreA/GreB family elongation factor K04760 greB; transcription elongation factor GreB
D Tbd_0037 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Tbd_1559 Transcriptional antiterminator, Rof K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:tbd03019]
D Tbd_1564 ribonuclease E and G K08300 rne; ribonuclease E [EC:3.1.26.12]
D Tbd_2437 ribonuclease E and G K08301 rng; ribonuclease G [EC:3.1.26.-]
D Tbd_2086 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Tbd_0608 exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Tbd_1839 Exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Tbd_1733 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Tbd_1101 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D Tbd_0896 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Tbd_0621 enolase (phosphopyruvate hydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tbd_0693 polyribonucleotide nucleotidyltransferase protein K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Tbd_0037 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Tbd_1538 molecular chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tbd_0091 chaperonin GroEL (Hsp60, Cpn10) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tbd_1533 host factor Hfq protein K03666 hfq; host factor-I protein
D Tbd_1085 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Tbd_2050 poly(A) polymerase, PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Tbd_2110 conserved hypothetical protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D Tbd_0529 P-loop ATPase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:tbd03011]
D Tbd_0956 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Tbd_0785 Ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Tbd_0411 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Tbd_0429 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Tbd_0422 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Tbd_2105 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Tbd_0401 Ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Tbd_0419 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Tbd_0454 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Tbd_0404 Ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Tbd_0428 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Tbd_0400 Ribosomal protein S12m K02950 RP-S12; small subunit ribosomal protein S12
D Tbd_0427 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Tbd_0418 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Tbd_0694 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Tbd_0414 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Tbd_2103 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Tbd_0409 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Tbd_1854 ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D Tbd_2385 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Tbd_0395 Ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Tbd_0408 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Tbd_0405 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Tbd_0406 ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D Tbd_0417 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Tbd_0420 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Tbd_2102 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Tbd_0396 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Tbd_0394 Ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Tbd_0397 Ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Tbd_0453 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Tbd_0415 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Tbd_0424 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Tbd_0412 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Tbd_0431 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Tbd_0421 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Tbd_2376 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Tbd_1010 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Tbd_0864 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Tbd_0410 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Tbd_0407 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D Tbd_0416 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Tbd_0865 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Tbd_2589 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Tbd_0413 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Tbd_0423 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Tbd_0039 Ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Tbd_1553 Ribosomal protein S32 K02911 RP-L32; large subunit ribosomal protein L32
D Tbd_2590 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Tbd_2827 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Tbd_1009 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Tbd_0388 Ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D Tbd_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tbd_R0037 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tbd_R0041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tbd_R0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tbd_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tbd_R0038 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tbd03009]
D Tbd_2086 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Tbd_0611 Protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D Tbd_1839 Exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Tbd_2085 GTPase K03595 era; GTPase
D Tbd_0866 putative conserved GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D Tbd_0691 Transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Tbd_2533 Transcriptional regulators, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Tbd_0698 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Tbd_2192 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Tbd_0393 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Tbd_0779 pseudouridine synthase, Rsu K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D Tbd_2340 ribosomal RNA 16S rRNA dimethylase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Tbd_0016 Fmu, rRNA SAM-dependent methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Tbd_2598 putative tRNA and rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Tbd_0379 Conserved hypothetical protein 95 K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Tbd_0155 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Tbd_2807 glucose inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Tbd_0111 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Tbd_1558 probable transmembrane protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Tbd_0108 Protein of unknown function UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Tbd_1059 rRNA (guanine-N1-)-methyltransferase, putative K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D Tbd_0609 RNA methyltransferase TrmH K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Tbd_1132 cell division protein FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D Tbd_2439 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Tbd_2424 N6-adenine-specific DNA methylase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D Tbd_0591 Conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Tbd_1951 Fe-S-cluster redox enzyme, radical SAM family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Tbd_0970 23S rRNA methyltransferase/RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Tbd_0658 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D Tbd_1258 pseudouridine synthase, Rsu K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Tbd_1563 pseudouridine synthase, RluD K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D Tbd_0810 pseudouridine synthase, RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Tbd_0853 pseudouridine synthase, Rsu K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D Tbd_0435 pseudouridine synthase, Rsu K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D Tbd_1724 Ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Tbd_2374 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Tbd_1764 conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Tbd_0612 Protein of unknown function DUF181 K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D Tbd_0180 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Tbd_1270 modification methylase HemK K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D Tbd_0585 conserved hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D Tbd_1564 ribonuclease E and G K08300 rne; ribonuclease E [EC:3.1.26.12]
D Tbd_2437 ribonuclease E and G K08301 rng; ribonuclease G [EC:3.1.26.-]
D Tbd_2580 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Tbd_1842 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Tbd_0598 GTP-binding protein K03977 engA; GTPase
D Tbd_2120 GTPase K14540 rbgA; ribosome biogenesis GTPase A
D Tbd_0602 GTP-binding protein HflX K03665 hflX; GTPase
D Tbd_1363 putative GTP-binding protein K03665 hflX; GTPase
D Tbd_2460 probable Sua5/YciO/YrdC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Tbd_0471 Metal dependent phosphohydrolase, HD region K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Tbd_0696 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Tbd_0699 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D Tbd_1157 conserved hypothetical protein K14761 rlbA; ribosome-associated protein
D Tbd_2440 Iojap-related protein K09710 ybeB; ribosome-associated protein
D Tbd_2704 Protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Tbd_1131 Protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein
D Tbd_2147 conserved hypothetical protein K09889 yjgA; ribosome-associated protein
D Tbd_0532 Possible Sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Tbd_0390 Conserved hypothetical protein K06942 ychF; ribosome-binding ATPase
D Tbd_1554 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:tbd03016]
D Tbd_2133 putative ribonuclease I K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D Tbd_2360 putative tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Tbd_2359 conserved hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Tbd_1734 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tbd_2112 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Tbd_1857 isoleucyl-tRNA synthetase, class Ia K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Tbd_2445 leucyl-tRNA synthetase, class Ia K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tbd_0860 methionyl-tRNA synthetase, class Ia K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Tbd_0850 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Tbd_2782 arginyl-tRNA synthetase, class Ic K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tbd_0893 lysyl-tRNA synthetase, class-2 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Tbd_0442 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tbd_0553 alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tbd_1007 threonyl-tRNA synthetase, class IIa K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Tbd_1229 seryl-tRNA synthetase, class IIa K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Tbd_1902 Cysteinyl-tRNA synthetase, class Ia K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Tbd_0577 valyl-tRNA synthetase, class Ia K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Tbd_0595 Histidyl-tRNA synthetase, class IIa K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tbd_1011 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Tbd_1012 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Tbd_0459 tyrosyl-tRNA synthetase, class Ib K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tbd_1525 tryptophanyl-tRNA synthetase, class Ib K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Tbd_1705 probable HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Tbd_2125 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Tbd_1916 tRNA pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Tbd_0695 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Tbd_1164 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tbd_2460 probable Sua5/YciO/YrdC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Tbd_1512 tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Tbd_2824 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Tbd_2808 Glucose-inhibited division protein A subfamily K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Tbd_1021 selenide water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Tbd_2826 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Tbd_R0002 RNA component of RNaseP K01978 rnpB; M1 RNA
D Tbd_0477 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Tbd_2575 ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D Tbd_1005 2',5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Tbd_2430 ABC transporter ATPase K06020 ettA; energy-dependent translational throttle protein EttA
D Tbd_2348 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Tbd_2347 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Tbd_2709 glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D Tbd_0677 YbaK-like protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D Tbd_1216 probable cytosine/adenosine deaminases K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Tbd_2456 dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Tbd_2706 tRNA-i(6)A37 modification enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Tbd_1161 RNA methyltransferase TrmH, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D Tbd_2375 tRNA (guanine-N1-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Tbd_2407 RNA methyltransferase CspR K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Tbd_0615 tRNA/rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D Tbd_0658 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D Tbd_0851 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Tbd_2508 putative cell cycle control ATPase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D Tbd_1254 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Tbd_0574 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Tbd_1982 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Tbd_2481 DsrH protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D Tbd_2482 DsrF protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D Tbd_2483 DsrE protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D Tbd_2326 putative sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D Tbd_1926 putative dissimilatory sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D Tbd_1166 Iron-sulphur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D Tbd_2098 glycine cleavage T-protein (aminomethyl transferase) K06980 ygfZ; tRNA-modifying protein YgfZ
D Tbd_1641 conserved hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D Tbd_2074 queuosine biosynthesis protein K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Tbd_2202 ExsB ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Tbd_2184 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Tbd_2314 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Tbd_2203 radical activating enzyme; radical SAM family K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Tbd_1227 conserved hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Tbd_1520 4Fe-4S ferredoxin protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Tbd_1757 rhodanese-like protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D Tbd_2075 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Tbd_0589 cell cycle protein MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Tbd_1725 glycoprotease, (M22) metallo-protease family K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Tbd_2384 o-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Tbd_0522 HesA/MoeB/ThiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D Tbd_0608 exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Tbd_0693 polyribonucleotide nucleotidyltransferase protein K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:tbd03012]
D Tbd_0697 initiation factor 2 K02519 infB; translation initiation factor IF-2
D Tbd_1008 initiation factor 3 K02520 infC; translation initiation factor IF-3
D Tbd_2351 ABC transpoter ATPase K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Tbd_0786 Elongation factor Ts K02357 tsf; elongation factor Ts
D Tbd_0391 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Tbd_0403 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Tbd_0402 translation elongation factor G K02355 fusA; elongation factor G
D Tbd_2493 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Tbd_0788 ribosome recycling factor K02838 frr; ribosome recycling factor
D Tbd_2494 modification methylase HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Tbd_0389 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Tbd_0426 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Tbd_1463 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Tbd_0857 Elongation factor P K02356 efp; elongation factor P
D Tbd_0921 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D Tbd_0968 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D Tbd_1523 conserved hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:tbd03110]
D Tbd_1237 ATP-dependent Clp protease, ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D Tbd_0815 ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Tbd_1676 ClpX, ATPase regulatory subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Tbd_2542 Heat shock protein HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Tbd_1078 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D Tbd_1538 molecular chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tbd_1168 Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D Tbd_0091 chaperonin GroEL (Hsp60, Cpn10) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tbd_1539 molecular chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Tbd_1431 putative heat shock protein, DnaJ family K05516 cbpA; curved DNA-binding protein
D Tbd_1167 Co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB
D Tbd_0750 disulfide bond chaperone, Hsp33 family K04083 hslO; molecular chaperone Hsp33
D Tbd_1537 molecular chaperone protein GrpE K03687 GRPE; molecular chaperone GrpE
D Tbd_2312 small heat shock protein K13993 HSP20; HSP20 family protein
D Tbd_1445 putative heat shock protein K13993 HSP20; HSP20 family protein
D Tbd_1370 small heat shock protein K13993 HSP20; HSP20 family protein
D Tbd_0509 RNA-binding S4 protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D Tbd_0092 chaperonin GroES (Hsp10, Cpn10)) K04078 groES; chaperonin GroES
D Tbd_2091 peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Tbd_1133 peptidase M41, FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Tbd_2803 F-type H+-transporting ATP synthase, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Tbd_2402 protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D Tbd_2687 conserved hypothetical protein K09796 pccA; periplasmic copper chaperone A
D Tbd_1382 hydrogenase expression/formation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Tbd_1383 Hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Tbd_1904 peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Tbd_2047 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Tbd_1673 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D Tbd_2152 peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D Tbd_1859 putative FKBP-type peptidyl-prolyl cis-trans isomerases 2 K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D Tbd_0587 fkbp-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D Tbd_2280 putative peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D Tbd_0975 FKBP-type peptidyl-prolyl cis-trans isomerase (Rotamase) protein K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D Tbd_1532 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Tbd_2338 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Tbd_0036 thioredoxin K03671 TXN; thioredoxin
D Tbd_0223 thioredoxin K03671 TXN; thioredoxin
D Tbd_0801 conserved hypothetical protein K03671 TXN; thioredoxin
D Tbd_2606 putative thioredoxin-like protein K03671 TXN; thioredoxin
D Tbd_2401 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D Tbd_0519 thioredoxin K05838 ybbN; putative thioredoxin
D Tbd_0886 putative thioredoxin protein K05838 ybbN; putative thioredoxin
D Tbd_2400 glutaredoxin, GrxC K03676 grxC; glutaredoxin 3
D Tbd_1126 glutaredoxin 3 K03676 grxC; glutaredoxin 3
D Tbd_2499 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D Tbd_2784 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D Tbd_2331 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D Tbd_2559 thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D Tbd_2790 thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D Tbd_2787 thiol:disulfide interchange protein DsbG K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:tbd04131]
D Tbd_1474 phospholipase D/Transphosphatidylase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4]
D Tbd_0590 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Tbd_1513 fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Tbd_0160 cbbG; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tbd_0162 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Tbd_1078 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D Tbd_1274 putative integral membrane protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:tbd04121]
C 03051 Proteasome [BR:tbd03051]
D Tbd_1078 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:tbd03032]
D Tbd_1663 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Tbd_1810 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Tbd_1674 Histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Tbd_0007 Histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Tbd_1013 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Tbd_0957 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Tbd_0001 chromosomal replication initiator protein, DnaA K02313 dnaA; chromosomal replication initiator protein
D Tbd_2101 DnaB helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Tbd_2068 DnaB helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Tbd_2387 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Tbd_0438 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Tbd_0858 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tbd_0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tbd_0579 putative DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Tbd_2443 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tbd_1542 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tbd_1662 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0827 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0089 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0515 DNA polymerase subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tbd_0799 ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Tbd_2453 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tbd_0624 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Tbd_0222 conserved hypothetical protein K10763 hda; DnaA-homolog protein
D Tbd_0948 DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Tbd_0003 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Tbd_0010 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Tbd_0745 conserved hypothetical protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tbd03036]
D Tbd_1810 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Tbd_2086 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Tbd_1513 fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Tbd_1674 Histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Tbd_0007 Histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Tbd_1013 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Tbd_0957 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Tbd_1431 putative heat shock protein, DnaJ family K05516 cbpA; curved DNA-binding protein
D Tbd_1430 transcriptional regulatory protein, MerR family K18997 cbpM; chaperone modulatory protein CbpM
D Tbd_0001 chromosomal replication initiator protein, DnaA K02313 dnaA; chromosomal replication initiator protein
D Tbd_2457 Transcriptional Regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Tbd_1533 host factor Hfq protein K03666 hfq; host factor-I protein
D Tbd_1228 Chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D Tbd_1256 conserved hypothetical protein K05896 scpA; segregation and condensation protein A
D Tbd_1257 Predicted transcriptional regulator K06024 scpB; segregation and condensation protein B
D Tbd_0124 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Tbd_0622 septum formation initiator protein K05589 ftsB; cell division protein FtsB
D Tbd_0375 Cell division ATP-binding protein FtsE, ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D Tbd_0113 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Tbd_1002 cell division transmembrane protein ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Tbd_0112 Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D Tbd_0123 cell division transmembrane protein K03589 ftsQ; cell division protein FtsQ
D Tbd_0118 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Tbd_0374 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Tbd_0125 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Tbd_2723 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D Tbd_2722 hypothetical protein K09892 zapB; cell division protein ZapB
D Tbd_2366 conserved hypothetical protein K18778 zapD; cell division protein ZapD
D Tbd_1519 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tbd_1418 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Tbd_2302 septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D Tbd_2303 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Tbd_2304 septum formation topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Tbd_2389 Possible Transcriptional Regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D Tbd_0260 Cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins
D Tbd_0261 Rod shape-determining protein MreC, subtype K03570 mreC; rod shape-determining protein MreC
D Tbd_0262 hypothetical protein K03571 mreD; rod shape-determining protein MreD
D Tbd_0264 Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D Tbd_2806 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D Tbd_2641 partition protein A K03496 parA; chromosome partitioning protein
D Tbd_2729 probable partition-related protein K03496 parA; chromosome partitioning protein
D Tbd_2805 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Tbd_2808 Glucose-inhibited division protein A subfamily K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Tbd_2807 glucose inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Tbd_2528 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D Tbd_2378 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Tbd_2108 ATP-binding protein involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Tbd_0188 GTP-binding K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:tbd03400]
D Tbd_2377 methylated-DNA-(protein)-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Tbd_2130 A/G-specific adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Tbd_2021 Endonuclease III/Nth K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Tbd_0027 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Tbd_2586 DeoxyUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Tbd_1481 putative phage DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Tbd_0703 conserved hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Tbd_1723 putative phage DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Tbd_2436 3-methyladenine DNA glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Tbd_0383 formamidopyrimidine-DNA glycolase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Tbd_2435 exodeoxyribonuclease III xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Tbd_0254 DNA-(apurinic or apyrimidinic site) lyase K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Tbd_1771 RecJ exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tbd_0624 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Tbd_2453 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tbd_0436 Excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Tbd_1568 Excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Tbd_0701 Excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Tbd_1306 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tbd_2449 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tbd_0398 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Tbd_0399 RNA polymerase I subunit A K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Tbd_0430 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Tbd_0472 RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Tbd_1656 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Tbd_1159 MutS 1 protein K03555 mutS; DNA mismatch repair protein MutS
D Tbd_1517 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D Tbd_1511 Exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Tbd_0881 Exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Tbd_0858 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tbd_0002 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tbd_0579 putative DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D Tbd_2443 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tbd_1542 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tbd_1662 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0827 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0089 Exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Tbd_0515 DNA polymerase subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tbd_0438 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Tbd_1812 DNA mismatch endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D Tbd_2197 RecA DNA recombination protein K03553 recA; recombination protein RecA
D Tbd_2213 DNA recombination protein, RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Tbd_2211 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Tbd_2214 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Tbd_2781 Primosomal protein n K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Tbd_2104 putative primosomal replication protein K02686 priB; primosomal replication protein N
D Tbd_0965 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Tbd_0469 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Tbd_2681 Predicted transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Tbd_1077 Predicted transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Tbd_2084 Recombination protein O, RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Tbd_0517 RecR protein K06187 recR; recombination protein RecR
D Tbd_2030 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Tbd_0033 conserved hypothetical protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D Tbd_0034 conserved hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D Tbd_2221 conserved hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D Tbd_2246 putative Ku-like DNA-end-binding protein K10979 ku; DNA end-binding protein Ku
D Tbd_2247 DNA ligase, ATP-dependent, putative K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Tbd_0948 DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Tbd_0003 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Tbd_0010 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Tbd_0745 conserved hypothetical protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Tbd_1674 Histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Tbd_0007 Histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Tbd_2457 Transcriptional Regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D Tbd_1013 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Tbd_0957 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Tbd_0896 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Tbd_1483 peptidase S24, LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D Tbd_0830 conserved hypothetical protein K14160 imuA; protein ImuA
D Tbd_0829 conserved hypothetical protein K14161 imuB; protein ImuB
D Tbd_0828 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D Tbd_2198 putative regulatory protein RecX K03565 recX; regulatory protein
D Tbd_1446 DNA polymerase X K02347 polX; DNA polymerase (family X)
D Tbd_0166 ATP-dependent DNA helicase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D Tbd_0997 helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Tbd_2635 hypothetical protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D Tbd_1976 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Tbd_0058 ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Tbd_1975 ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:tbd03029]
D Tbd_1832 cytochrome B subunit of cytochrome bc1 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D Tbd_0697 initiation factor 2 K02519 infB; translation initiation factor IF-2
D Tbd_1008 initiation factor 3 K02520 infC; translation initiation factor IF-3
D Tbd_0786 Elongation factor Ts K02357 tsf; elongation factor Ts
D Tbd_0391 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Tbd_0403 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Tbd_0402 translation elongation factor G K02355 fusA; elongation factor G
D Tbd_2085 GTPase K03595 era; GTPase
D Tbd_0459 tyrosyl-tRNA synthetase, class Ib K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tbd_2445 leucyl-tRNA synthetase, class Ia K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tbd_0442 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tbd_2782 arginyl-tRNA synthetase, class Ic K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tbd_0258 glutamyl-tRNA(Gln) amidotransferase A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Tbd_0257 glutamyl-tRNA(Gln) amidotransferase B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Tbd_0259 glutamyl-tRNA(Gln) amidotransferase C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Tbd_0438 Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Tbd_0793 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Tbd_1538 molecular chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tbd_1537 molecular chaperone protein GrpE K03687 GRPE; molecular chaperone GrpE
D Tbd_0091 chaperonin GroEL (Hsp60, Cpn10) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tbd_0092 chaperonin GroES (Hsp10, Cpn10)) K04078 groES; chaperonin GroES
D Tbd_1539 molecular chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Tbd_1164 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tbd_1167 Co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB
D Tbd_2499 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D Tbd_2108 ATP-binding protein involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Tbd_0335 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Tbd_0328 probable cytochrome C oxidase assembly transmembrane protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D Tbd_0334 putative cytochrome aa3 oxidase assembly protein,related to CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D Tbd_2825 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tbd_0332 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D Tbd_0337 putative SCO1/SenC family protein K07152 SCO1; protein SCO1
D Tbd_1078 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tbd02000]
D Tbd_2507 lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Tbd_1273 ABC-type transport system ATPase K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D Tbd_0739 ABC transport protein ATPase component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Tbd_2816 ABC transporter ATPase K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D Tbd_2810 ABC transporter ATPase K15738 uup; ABC transport system ATP-binding/permease protein
D Tbd_1283 molybdenum ABC transporter, periplasmic binding protein K02020 modA; molybdate transport system substrate-binding protein
D Tbd_1284 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D Tbd_1285 molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Tbd_2272 nitrate transporter periplasmic component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D Tbd_2273 nitrate transport permease K15577 nrtB; nitrate/nitrite transport system permease protein
D Tbd_2274 nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D Tbd_0990 ABC transporter, iron binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D Tbd_0989 iron transport system permease protein K02011 afuB; iron(III) transport system permease protein
D Tbd_0988 transport system ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Tbd_1898 putative ABC transporter substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Tbd_0249 ABC-type transport system periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Tbd_0978 ABC-type transport system periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Tbd_1899 Protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Tbd_0247 ABC transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Tbd_0980 ABC-type transport system ipermease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Tbd_1900 ABC transporter ATPase K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Tbd_1190 ATP-binding ABC transporter protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Tbd_0248 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Tbd_0250 putative lipoprotein K18480 linN; cholesterol transport system auxiliary component
D Tbd_1896 putative signal peptide protein K07323 mlaC; phospholipid transport system substrate-binding protein
D Tbd_1895 NTP binding protein containing STAS domain K07122 mlaB; phospholipid transport system transporter-binding protein
D Tbd_1136 Periplasmic phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Tbd_1420 Periplasmic phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Tbd_1137 phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D Tbd_1138 phosphate transport system permease protein 2 K02038 pstA; phosphate transport system permease protein
D Tbd_1139 phosphate transport system permease protein 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Tbd_2300 Phosphonate-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein
D Tbd_2297 ABC phosphonate permease K02042 phnE; phosphonate transport system permease protein
D Tbd_2298 ABC phosphonate permease K02042 phnE; phosphonate transport system permease protein
D Tbd_2299 ABC phosphate/phosphonate transport system ATPase K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D Tbd_1671 oligopeptide ABC transporter periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tbd_1670 oligopeptide ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tbd_1669 oligopeptide ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tbd_1668 oligopeptidee ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tbd_1122 probable substrate-binding periplasmic (PBP) ABC transporter protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Tbd_2048 putative transmembrane ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D Tbd_2049 putative Fe3+-siderophores transport system ATPase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Tbd_2538 zinc/manganese transport system substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D Tbd_2539 zinc/manganese transport system permease protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D Tbd_1878 ABC transporter permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D Tbd_1877 ABC transporter ATPase K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Tbd_0581 conserved hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D Tbd_0582 conserved hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D Tbd_0534 ATPase component ABC-type transport system K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Tbd_0276 ABC-2 type transporter, NodJ K09694 nodJ; lipooligosaccharide transport system permease protein
D Tbd_0277 ABC-2 type transporter ATPase K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D Tbd_1393 ABC transporter transmembrane protein K19341 nosY; Cu-processing system permease protein
D Tbd_1392 ABC transporter ATPase K19340 nosF; Cu-processing system ATP-binding protein
D Tbd_1761 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D Tbd_1760 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Tbd_0374 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Tbd_0375 Cell division ATP-binding protein FtsE, ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D Tbd_1893 ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tbd_1082 ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tbd_1894 ABC-type multidrug transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tbd_1083 ABC transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tbd_1582 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D Tbd_1360 ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D Tbd_1412 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D Tbd_0684 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D Tbd_0685 ABC transporter, ATPase protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Tbd_1359 ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Tbd_1583 ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Tbd_1413 ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Tbd_1923 putative transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D Tbd_1401 nitrate/proton symporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Tbd_1402 nitrate/nitrite antiporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Tbd_1718 putative membrane protein K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D Tbd_0253 putative transport transmembrane protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D Tbd_1274 putative integral membrane protein K06902 UMF1; MFS transporter, UMF1 family
D Tbd_2414 Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Tbd_2413 HPrNtr K02784 ptsH; phosphocarrier protein HPr
D Tbd_2412 pentitol phosphotransferase enzyme IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Tbd_0531 Possible PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D Tbd_0241 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Tbd_1701 putative ammonium transporter K03320 amt; ammonium transporter, Amt family
D Tbd_0846 probable glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Tbd_1050 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D Tbd_1830 stringent starvation protein a K03599 sspA; stringent starvation protein A
D Tbd_0489 conserved hypothetical protein K19416 yccA; modulator of FtsH protease
D Tbd_1943 putativel formate transporter K21993 fdhC; formate transporter
D Tbd_2455 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D Tbd_0499 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D Tbd_1462 small-conductance mechanosensitive channel protein K16052 ynaI; MscS family membrane protein
D Tbd_2506 divalent cation transporter K06213 mgtE; magnesium transporter
D Tbd_1243 probable chemotaxis transmembrane protein MotA K02556 motA; chemotaxis protein MotA
D Tbd_1250 chemotaxis transmembrane protein MotA K02556 motA; chemotaxis protein MotA
D Tbd_1244 outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D Tbd_1251 outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D Tbd_1510 probable exbB-like biopolymer transport K03561 exbB; biopolymer transport protein ExbB
D Tbd_0712 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D Tbd_0911 MotA/TolQ/ExbB proton channel family K03561 exbB; biopolymer transport protein ExbB
D Tbd_0357 putative transport protein ExbB2 K03561 exbB; biopolymer transport protein ExbB
D Tbd_0358 biopolymer transport protein, ExbD/TolR family K03559 exbD; biopolymer transport protein ExbD
D Tbd_0711 putative biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D Tbd_0912 biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Tbd_1509 biopolymer transport exbD-related transmembrane protein K03559 exbD; biopolymer transport protein ExbD
D Tbd_2209 MotA/TolQ/ExbB proton channel family K03562 tolQ; biopolymer transport protein TolQ
D Tbd_2208 biopolymer transport protein ExbD/TolR K03560 tolR; biopolymer transport protein TolR
D Tbd_2140 probable magnesium and cobalt transport transmembrane protein K03284 corA; magnesium transporter
D Tbd_1036 Camphor resistance CrcB protein K06199 crcB; fluoride exporter
D Tbd_1339 putative mercuric transport protein K08363 merT; mercuric ion transport protein
D Tbd_1340 Mercuric transport protein periplasmic component K08364 merP; periplasmic mercuric ion binding protein
D Tbd_2313 conserved hypothetical protein containing CBS domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Tbd_2371 probable transmembrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Tbd_0127 outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Tbd_1171 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Tbd_2454 outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Tbd_2596 long chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D Tbd_2776 putative transporter protein K06076 fadL; long-chain fatty acid transport protein
D Tbd_1799 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D Tbd_2180 putative Long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D Tbd_0576 putative long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D Tbd_0722 TonB-dependent siderophore receptor K16091 fecA; Fe(3+) dicitrate transport protein
D Tbd_2720 iron complex outermembrane recepter protein K16092 btuB; vitamin B12 transporter
D Tbd_2591 hemin receptor precursor, TonB-dependent outer membrane uptake protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D Tbd_2688 TonB-dependent receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Tbd_1266 probable TonB-dependent iron complex outermembrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Tbd_0439 conserved hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Tbd_0715 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Tbd_0909 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Tbd_1329 probable cobalt-zinc-cadmium outer membrane resistance protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Tbd_0144 hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Tbd_1335 heavy metal RND efflux outer membrane protein, CzcC family K15725 czcC; outer membrane protein, heavy metal efflux system
D Tbd_1748 putative outer membrane protein K15725 czcC; outer membrane protein, heavy metal efflux system
D Tbd_2697 type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Tbd_1897 putative Outer membrane protein K12340 tolC; outer membrane protein
D Tbd_2321 putative secretion protein K12340 tolC; outer membrane protein
D Tbd_1416 RND efflux system outer membrane lipoprotein NodT K18139 oprM; outer membrane protein, multidrug efflux system
D Tbd_1795 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D Tbd_0281 polysaccharide export outer membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D Tbd_0793 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Tbd_0597 pyrrolo-quinoline quinone K17713 bamB; outer membrane protein assembly factor BamB
D Tbd_1099 uncharacterized lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D Tbd_0809 putative competence lipoprotein precursor K05807 bamD; outer membrane protein assembly factor BamD
D Tbd_1124 conserved hypothetical protein K06186 bamE; outer membrane protein assembly factor BamE
D Tbd_0833 conserved hypothetical protein K07278 tamA; translocation and assembly module TamA
D Tbd_0834 putative signal peptide protein K09800 tamB; translocation and assembly module TamB
D Tbd_0535 OstA-like family protein K09774 lptA; lipopolysaccharide export system protein LptA
D Tbd_0536 conserved hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D Tbd_2337 organic solvent tolerance transmembrane protein K04744 lptD; LPS-assembly protein
D Tbd_2444 putative lipoprotein B precursor transmembrane K03643 lptE; LPS-assembly lipoprotein
D Tbd_2703 conserved hypothetical protein containing CBS domain K06189 corC; hemolysin (HlyC) family protein
D Tbd_0726 Cation efflux protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Tbd_1765 ZIP Zinc transporter K16267 zipB; zinc and cadmium transporter
D Tbd_2324 membrane protein, putative K07238 TC.ZIP; zinc transporter, ZIP family
D Tbd_1327 heavy metal efflux pump CzcA K15726 czcA; heavy metal efflux system protein
D Tbd_0143 heavy metal efflux pump CzcA K15726 czcA; heavy metal efflux system protein
D Tbd_1333 heavy metal efflux pump CzcA K07787 cusA; copper/silver efflux system protein
D Tbd_2531 probable transmembrane drug efflux protein K18303 mexK; multidrug efflux pump
D Tbd_1417 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump
D Tbd_1337 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D Tbd_2520 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter
D Tbd_0802 Ca2+:cation antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D Tbd_0501 Ca2+:cation antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D Tbd_0088 sodium:solute symporter family protein K14393 actP; cation/acetate symporter
D Tbd_0500 sodium/hydrogen exchanger family protein K11105 cvrA; potassium/hydrogen antiporter
D Tbd_0539 monovalent cation:H+ antiporter-2, CPA2 family K03455 KEA1_2_3; K+:H+ antiporter
D Tbd_2469 putative efflux pump/antiporter K26735 KEA4_5_6; K+:H+ antiporter
D Tbd_2757 sodium/hydrogen exchanger family protein K26731 CHX; K+:H+ antiporter
D Tbd_0021 trk system potassium uptake membrane protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D Tbd_0022 trk system potassium uptake membrane protein K03498 trkH; trk/ktr system potassium uptake protein
D Tbd_0020 trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D Tbd_2656 Chromate transporter K07240 chrA; chromate transporter
D Tbd_2616 sulfate permease, SulP family K03321 TC.SULP; sulfate permease, SulP family
D Tbd_2028 probable high affinity sulfate transporter (SulP) K03321 TC.SULP; sulfate permease, SulP family
D Tbd_2609 sulphate anion transporter K03321 TC.SULP; sulfate permease, SulP family
D Tbd_2640 probable high affinity sulfate transporter (SulP) K03321 TC.SULP; sulfate permease, SulP family
D Tbd_0468 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Tbd_1426 putative arsenite transporter, ACR3 family K03325 ACR3; arsenite transporter
D Tbd_0497 NADH dehydrogenase (quinone) K05559 phaA; multicomponent K+:H+ antiporter subunit A
D Tbd_0496 multicomponent K+:H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D Tbd_0495 NADH dehydrogenase (quinone) K05561 phaD; multicomponent K+:H+ antiporter subunit D
D Tbd_0494 multicomponent K+:H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D Tbd_0493 multisubunit Na+/H+ antiporter, subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D Tbd_0492 Na+/H+ antiporter subunit K05564 phaG; multicomponent K+:H+ antiporter subunit G
D Tbd_1855 virulence factor MVIN-like protein K03980 murJ; putative peptidoglycan lipid II flippase
D Tbd_0082 conserved hypothetical protein K24180 mleP; malate permease and related proteins
D Tbd_2065 potassium uptake protein K03549 kup; KUP system potassium uptake protein
D Tbd_0236 conserved membrane protein K22736 VIT; vacuolar iron transporter family protein
D Tbd_2124 multiple antibiotic resistance (MarC)-related proteins K05595 marC; multiple antibiotic resistance protein
D Tbd_0118 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Tbd_0723 cytochrome c, class I K07243 FTR; high-affinity iron transporter
D Tbd_0910 TonB protein K03832 tonB; periplasmic protein TonB
D Tbd_0713 periplasmic protein TonB K03832 tonB; periplasmic protein TonB
D Tbd_2576 TonB-like protein K03832 tonB; periplasmic protein TonB
D Tbd_0359 TonB-dependent receptor, putative K03832 tonB; periplasmic protein TonB
D Tbd_2268 TonB domain protein K03832 tonB; periplasmic protein TonB
D Tbd_2205 outer membrane protein, porin-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D Tbd_2206 probable tolB-related transport protein K03641 tolB; TolB protein
D Tbd_1500 inorganic H+ pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Tbd_1403 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Tbd_1404 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Tbd_1406 nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Tbd_1741 putative tetrathionate reductase, subunit A K08357 ttrA; tetrathionate reductase subunit A
D Tbd_1739 putative tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D Tbd_1740 putative tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D Tbd_1328 Secretion protein HlyD K15727 czcB; membrane fusion protein, heavy metal efflux system
D Tbd_0142 Secretion protein HlyD K15727 czcB; membrane fusion protein, heavy metal efflux system
D Tbd_1747 hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D Tbd_1334 Secretion protein HlyD K07798 cusB; membrane fusion protein, copper/silver efflux system
D Tbd_0901 Secretion protein HlyD K07798 cusB; membrane fusion protein, copper/silver efflux system
D Tbd_2532 Secretion protein HlyD K18302 mexJ; membrane fusion protein, multidrug efflux system
D Tbd_1418 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Tbd_1793 conserved hypothetical protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Tbd_0283 protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Tbd_0282 polysaccharide chain length determinant protein K25590 epsF; protein tyrosine kinase modulator
D Tbd_1794 chain length determinant protein K25590 epsF; protein tyrosine kinase modulator
D Tbd_2234 probable lipoprotein transmembrane K16348 ecnB; entericidin B
D Tbd_0663 putative Mg(2+) transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D Tbd_2761 putative outer membrane protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:tbd02044]
D Tbd_2697 type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Tbd_1897 putative Outer membrane protein K12340 tolC; outer membrane protein
D Tbd_2321 putative secretion protein K12340 tolC; outer membrane protein
D Tbd_0285 ATPase K02450 gspA; general secretion pathway protein A
D Tbd_1300 type II secretion system protein D K02453 gspD; general secretion pathway protein D
D Tbd_1439 type II secretion system protein D K02453 gspD; general secretion pathway protein D
D Tbd_0549 putative Type II secretory pathway component PulD K02453 gspD; general secretion pathway protein D
D Tbd_1295 type II secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Tbd_1434 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D Tbd_1294 type II secretion system protein F K02455 gspF; general secretion pathway protein F
D Tbd_1433 type II secretion system protein F K02455 gspF; general secretion pathway protein F
D Tbd_1301 type II secretion system protein K02456 gspG; general secretion pathway protein G
D Tbd_1440 type II secretion system transmembrane protein K02456 gspG; general secretion pathway protein G
D Tbd_1441 type II secretion system protein G K02456 gspG; general secretion pathway protein G
D Tbd_1293 tyep II secretion system protein G K02456 gspG; general secretion pathway protein G
D Tbd_1432 type II secretion systen protein G K02456 gspG; general secretion pathway protein G
D Tbd_1302 type II secretion system protein K02456 gspG; general secretion pathway protein G
D Tbd_2368 prepilin cysteine protease (C20) PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tbd_2200 pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA
D Tbd_0547 ATPase, type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D Tbd_2370 type IV pilus assembly protein, PilB K02652 pilB; type IV pilus assembly protein PilB
D Tbd_0546 type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D Tbd_2369 type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D Tbd_1865 pilus assembly protein K02655 pilE; type IV pilus assembly protein PilE
D Tbd_0592 putative pilus assembly protein PilF, TPR repeat K02656 pilF; type IV pilus assembly protein PilF
D Tbd_2552 Response regulator receiver domain protein (CheY) K02657 pilG; twitching motility two-component system response regulator PilG
D Tbd_2551 Response regulator receiver domain protein (CheY) K02658 pilH; twitching motility two-component system response regulator PilH
D Tbd_2550 twitching motility protein PilI K02659 pilI; twitching motility protein PilI
D Tbd_2549 chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D Tbd_0202 Type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Tbd_0203 type IV pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D Tbd_0204 type IV pilus assembly membrane transmembrane protein K02664 pilO; type IV pilus assembly protein PilO
D Tbd_0205 type IV pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D Tbd_0206 type IV pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D Tbd_2419 Pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D Tbd_2420 Pilus retraction protein PilT K02670 pilU; twitching motility protein PilU
D Tbd_1541 type IV pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D Tbd_1918 conserved hypothetical protein K08086 fimV; pilus assembly protein FimV
D Tbd_0754 type II secretory pathway, pseudopilin PulG K10924 mshA; MSHA pilin protein MshA
D Tbd_0755 general secretion pathway protein H K10926 mshC; MSHA pilin protein MshC
D Tbd_0756 hypothetical protein K10927 mshD; MSHA pilin protein MshD
D Tbd_0752 pilus assembly pathway ATPase PilB K12276 mshE; MSHA biogenesis protein MshE
D Tbd_0753 type II secretory pathway component PulF K12278 mshG; MSHA biogenesis protein MshG
D Tbd_0760 hypothetical protein K12279 mshI; MSHA biogenesis protein MshI
D Tbd_0762 hypothetical protein K12280 mshJ; MSHA biogenesis protein MshJ
D Tbd_0763 hypothetical protein K12281 mshK; MSHA biogenesis protein MshK
D Tbd_0764 general secretion pathway protein D K12282 mshL; MSHA biogenesis protein MshL
D Tbd_0765 type II secretory pathway component ATPase K12283 mshM; MSHA biogenesis protein MshM
D Tbd_0550 ATPase, Type II secretory pathway component K12283 mshM; MSHA biogenesis protein MshM
D Tbd_0766 conserved hypothetical protein containing TPR repeat K12284 mshN; MSHA biogenesis protein MshN
D Tbd_0757 hypothetical protein K12285 mshO; MSHA biogenesis protein MshO
D Tbd_0758 hypothetical protein K12286 mshP; MSHA biogenesis protein MshP
D Tbd_0759 Protein of unknown function DUF11 K12287 mshQ; MSHA biogenesis protein MshQ
D Tbd_2416 conserved hypothetical protein K02221 yggT; YggT family protein
D Tbd_1766 Competence protein ComEA K02237 comEA; competence protein ComEA
D Tbd_1759 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D Tbd_1246 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tbd_1177 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tbd_1245 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tbd_1176 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tbd_1596 flagellar protein FhlB K04061 flhB2; flagellar biosynthesis protein
D Tbd_1088 flagellar biosynthesis/type III secretory pathway lipoprotein FliF K02409 fliF; flagellar M-ring protein FliF
D Tbd_1600 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Tbd_1090 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Tbd_1602 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Tbd_1603 flagellar biosynthesis/type III secretory pathway ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tbd_1091 flagella ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tbd_1608 flagellar motor switch/type III secretory pathway protein FliN K02417 fliN; flagellar motor switch protein FliN
D Tbd_1094 probable Flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Tbd_1609 flagellar biogenesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Tbd_1610 flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tbd_1095 flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tbd_1096 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tbd_1611 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tbd_1612 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Tbd_1097 probable flagellar biosynthetic fliR transmembrane protein K02421 fliR; flagellar biosynthesis protein FliR
D Tbd_2331 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D Tbd_1819 hypothetical protein K20266 trbJ; type IV secretion system protein TrbJ
D Tbd_0131 SecA protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tbd_2402 protein export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D Tbd_2079 preprotein translocase protein SecD K03072 secD; preprotein translocase subunit SecD
D Tbd_0392 SecE subunit of protein translocation complex K03073 secE; preprotein translocase subunit SecE
D Tbd_2080 preprotein translocase protein SecF K03074 secF; preprotein translocase subunit SecF
D Tbd_1141 preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D Tbd_0425 SecY protein K03076 secY; preprotein translocase subunit SecY
D Tbd_2373 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Tbd_0376 Cell division transporter substrate-binding protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Tbd_2078 preprotein translocase protein YajC K03210 yajC; preprotein translocase subunit YajC
D Tbd_2825 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tbd_1704 twin-arginine translocation protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D Tbd_1703 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D Tbd_1702 Sec-independent periplasmic protein translocase K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:tbd02042]
D Tbd_2313 conserved hypothetical protein containing CBS domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Tbd_2371 probable transmembrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Tbd_2707 hemolysin-like protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:tbd02022]
D Tbd_0217 PAS/PAC Sensor Signal Transduction Histidine Kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Tbd_0216 Two component Transcriptional regulator, Winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Tbd_2353 Periplasmic Sensor Signal Transduction Histidine Kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Tbd_1288 Periplasmic Sensor Signal Transduction Histidine Kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D Tbd_1287 Two component Transcriptional regulator, Winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D Tbd_1750 Multi-sensor Signal Transduction Histidine Kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Tbd_1749 Two component Heavy metal response Transcriptional regulator, Winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Tbd_2792 Periplasmic Sensor Signal Transduction Histidine Kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D Tbd_2791 Two component Transcriptional regulator, Winged helix family K07666 qseB; two-component system, OmpR family, response regulator QseB
D Tbd_0348 Two component Transcriptional regulator, Winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Tbd_0135 Periplasmic Sensor Signal Transduction Histidine Kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Tbd_2354 Two component Transcriptional regulator, Winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Tbd_0136 Two component Transcriptional regulator, Winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D Tbd_1400 Periplasmic Sensor Signal Transduction Histidine Kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Tbd_2463 GAF Sensor Signal Transduction Histidine Kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D Tbd_2464 Two Component Transcriptional Regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Tbd_1399 Two Component Transcriptional Regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Tbd_2786 Two Component Transcriptional Regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Tbd_1587 Possible Sensor with PAS/PAC domain K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D Tbd_1588 Two Component Transcriptional Regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Tbd_2237 Two Component Transcriptional Regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D Tbd_0230 two-component system sensor ATPase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D Tbd_0231 Response regulator receiver domain protein (CheY) K08083 algR; two-component system, LytTR family, response regulator AlgR
D Tbd_2501 PAS/PAC Sensor Signal Transduction Histidine Kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Tbd_2500 Two Component Transcriptional Regulator, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Tbd_0018 Multi-sensor Signal Transduction Histidine Kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Tbd_0019 Two Component Transcriptional Regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D Tbd_1806 Periplasmic Sensor Signal Transduction Histidine Kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Tbd_1807 Two Component Transcriptional Regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR
D Tbd_2769 Periplasmic Sensor Signal Transduction Histidine Kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D Tbd_2771 Two Component Transcriptional Regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR
D Tbd_0197 Two Component Transcriptional Regulator, Fis family K02481 flgR; two-component system, NtrC family, response regulator
D Tbd_1624 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tbd_1614 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tbd_1625 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tbd_1615 Response regulator receiver domain protein (CheY) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tbd_1598 CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Tbd_2548 CheA Signal Transduction Histidine Kinases (STHK) K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D Tbd_2552 Response regulator receiver domain protein (CheY) K02657 pilG; twitching motility two-component system response regulator PilG
D Tbd_2551 Response regulator receiver domain protein (CheY) K02658 pilH; twitching motility two-component system response regulator PilH
D Tbd_1744 Histidine Kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D Tbd_1743 Two Component Transcriptional Regulator, LuxR family K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D Tbd_2671 Periplasmic Sensor Hybrid Histidine Kinase K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D Tbd_2670 Metal dependent phosphohydrolase, HD region K13815 rpfG; two-component system, response regulator RpfG
D Tbd_2689 Periplasmic Sensor Signal Transduction Histidine Kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D Tbd_2690 Two Component Transcriptional Regulator, Fis family K15012 regA; two-component system, response regulator RegA
D Tbd_2271 Response regulator receiver domain protein (CheY) K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:tbd02035]
D Tbd_1624 CheA Signal Transduction Histidine Kinases (STHK) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tbd_1623 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Tbd_1616 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Tbd_1617 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Tbd_1615 Response regulator receiver domain protein (CheY) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tbd_1614 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tbd_1625 Response regulator receiver domain protein (CheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tbd_1613 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D Tbd_1598 CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Tbd_1619 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tbd_1620 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tbd_0660 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Tbd_1622 chemotaxis sensory transducer K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D Tbd_2406 chemotaxis sensory transducer K03776 aer; aerotaxis receptor
D Tbd_1618 chemotaxis sensory transducer K03776 aer; aerotaxis receptor
D Tbd_1090 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Tbd_1602 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Tbd_1603 flagellar biosynthesis/type III secretory pathway ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tbd_1091 flagella ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tbd_1604 flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D Tbd_1094 probable Flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Tbd_1609 flagellar biogenesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Tbd_1610 flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tbd_1095 flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tbd_1096 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tbd_1611 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tbd_1612 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Tbd_1097 probable flagellar biosynthetic fliR transmembrane protein K02421 fliR; flagellar biosynthesis protein FliR
D Tbd_1246 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tbd_1177 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tbd_1245 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tbd_1176 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tbd_1089 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tbd_1601 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tbd_1607 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Tbd_1608 flagellar motor switch/type III secretory pathway protein FliN K02417 fliN; flagellar motor switch protein FliN
D Tbd_1088 flagellar biosynthesis/type III secretory pathway lipoprotein FliF K02409 fliF; flagellar M-ring protein FliF
D Tbd_1600 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Tbd_1630 flagellar P-ring protein precursor FlgI K02394 flgI; flagellar P-ring protein FlgI
D Tbd_1638 putative flagella basal body P-ring formation protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Tbd_1631 flagellar L-ring protein precursor FlgH K02393 flgH; flagellar L-ring protein FlgH
D Tbd_1606 probable flagellar transmembrane protein FliL K02415 fliL; flagellar protein FliL
D Tbd_1599 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Tbd_1605 putative flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D Tbd_1637 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Tbd_1636 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Tbd_1635 flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D Tbd_1633 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Tbd_1632 flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Tbd_1629 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D Tbd_1634 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D Tbd_1628 Flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D Tbd_1627 flagellin, flagellar hook-associated protein 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D Tbd_1640 putative flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D Tbd_1590 flagellin FliC K02406 fliC; flagellin
D Tbd_1592 flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D Tbd_1593 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Tbd_1594 flagellar protein FliT K02423 fliT; flagellar protein FliT
D Tbd_1240 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D Tbd_1241 flagellar regulon master regulator subunit FlhC K02402 flhC; flagellar transcriptional activator FlhC
D Tbd_1249 RNA polymerase sigma-70 factor K02405 fliA; RNA polymerase sigma factor FliA
D Tbd_1180 RNA polymerase sigma-70 factor K02405 fliA; RNA polymerase sigma factor FliA
D Tbd_1243 probable chemotaxis transmembrane protein MotA K02556 motA; chemotaxis protein MotA
D Tbd_1250 chemotaxis transmembrane protein MotA K02556 motA; chemotaxis protein MotA
D Tbd_1244 outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D Tbd_1251 outer membrane chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D Tbd_1658 Putative Anti-Sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Tbd_1639 Putative Anti-Sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Tbd_1591 putative flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D Tbd_1247 putative flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D Tbd_1178 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D Tbd_1248 putative flagellar biosynthesis protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D Tbd_1928 flagellar biosynthesis switch protein K04562 flhG; flagellar biosynthesis protein FlhG
D Tbd_2552 Response regulator receiver domain protein (CheY) K02657 pilG; twitching motility two-component system response regulator PilG
D Tbd_2551 Response regulator receiver domain protein (CheY) K02658 pilH; twitching motility two-component system response regulator PilH
D Tbd_2550 twitching motility protein PilI K02659 pilI; twitching motility protein PilI
D Tbd_2549 chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D Tbd_2548 CheA Signal Transduction Histidine Kinases (STHK) K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D Tbd_1807 Two Component Transcriptional Regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR
D Tbd_1806 Periplasmic Sensor Signal Transduction Histidine Kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Tbd_2419 Pilus retraction protein PilT K02669 pilT; twitching motility protein PilT
D Tbd_2420 Pilus retraction protein PilT K02670 pilU; twitching motility protein PilU
D Tbd_2200 pilus assembly protein PilA K02650 pilA; type IV pilus assembly protein PilA
D Tbd_0547 ATPase, type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D Tbd_2370 type IV pilus assembly protein, PilB K02652 pilB; type IV pilus assembly protein PilB
D Tbd_0546 type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D Tbd_2369 type IV pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D Tbd_2368 prepilin cysteine protease (C20) PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tbd_0592 putative pilus assembly protein PilF, TPR repeat K02656 pilF; type IV pilus assembly protein PilF
D Tbd_0206 type IV pilus assembly protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D Tbd_0205 type IV pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D Tbd_0204 type IV pilus assembly membrane transmembrane protein K02664 pilO; type IV pilus assembly protein PilO
D Tbd_0203 type IV pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D Tbd_0202 Type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Tbd_1541 type IV pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D Tbd_1865 pilus assembly protein K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tbd04812]
D Tbd_1586 conserved hypothetical protein K06990 MEMO1; MEMO1 family protein
D Tbd_0260 Cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins
D Tbd_0125 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Tbd_0124 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Tbd_2302 septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D Tbd_2303 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Tbd_2304 septum formation topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Tbd_2806 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D Tbd_2641 partition protein A K03496 parA; chromosome partitioning protein
D Tbd_2729 probable partition-related protein K03496 parA; chromosome partitioning protein
D Tbd_2805 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:tbd04147]
D Tbd_1078 Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D Tbd_1513 fructose-bisphosphate aldolase, class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Tbd_0621 enolase (phosphopyruvate hydratase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tbd_0160 cbbG; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tbd_0161 cbbK; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Tbd_0162 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Tbd_0091 chaperonin GroEL (Hsp60, Cpn10) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tbd_1538 molecular chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tbd_0974 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tbd_2063 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tbd_1752 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Tbd_0391 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Tbd_0403 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Tbd_1705 probable HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Tbd_2597 long-chain fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Tbd_2519 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Tbd_1504 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Tbd_0229 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Tbd_1849 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Tbd_2577 cbbF; fructose-1,6-bisphosphatase/sedoheptulose-1,7-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Tbd_2058 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Tbd_2503 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tbd_0189 delta-aminolevulinic acid dehydratase, porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Tbd_1841 pterin 4 alpha carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Tbd_2642 conserved hypothetical protein K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Tbd_0950 D-isomer specific 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tbd_2458 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase bifunctional enzyme K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Tbd_0652 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tbd_2122 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D Tbd_1140 cbbJ; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Tbd_1196 outer membrane lipoprotein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:tbd02048]
D Tbd_2685 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Tbd_2682 putative restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Tbd_2680 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Tbd_1810 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Tbd_0937 conserved hypothetical protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Tbd_2275 hypothetical protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Tbd_1492 type III restriction-modification enzyme helicase subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D Tbd_2276 adenine specific DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Tbd_1491 adenine specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Tbd_0936 adenine specific DNA methylase MOD K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Tbd_0672 Possible Plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D Tbd_0125 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Tbd_0260 Cell shape determining protein MreB/Mrl K03569 mreB; rod shape-determining protein MreB and related proteins
D Tbd_1734 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Tbd_2097 conserved hypothetical protein K19168 cptA; toxin CptA
D Tbd_1186 conserved hypothetical protein K09159 cptB; antitoxin CptB
D Tbd_1164 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:tbd04090]
C 01504 Antimicrobial resistance genes [BR:tbd01504]
D Tbd_1750 Multi-sensor Signal Transduction Histidine Kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D Tbd_1749 Two component Heavy metal response Transcriptional regulator, Winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D Tbd_1418 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system
D Tbd_1417 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump
D Tbd_1416 RND efflux system outer membrane lipoprotein NodT K18139 oprM; outer membrane protein, multidrug efflux system
D Tbd_2532 Secretion protein HlyD K18302 mexJ; membrane fusion protein, multidrug efflux system
D Tbd_2531 probable transmembrane drug efflux protein K18303 mexK; multidrug efflux pump
D Tbd_2267 Transcriptional Regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Tbd_2697 type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein
D Tbd_1897 putative Outer membrane protein K12340 tolC; outer membrane protein
D Tbd_2321 putative secretion protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:tbd00536]
D Tbd_0355 filamentous haemagglutinin-related protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tbd00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tbd03100]
D Tbd_R0044 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tbd_R0052 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tbd_R0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tbd_R0039 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tbd_R0046 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tbd_R0003 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tbd_R0017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tbd_R0024 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tbd_R0031 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Tbd_R0032 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Tbd_R0020 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Tbd_R0004 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Tbd_R0045 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tbd_R0021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tbd_R0048 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tbd_R0006 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tbd_R0016 tRNA-His K14226 tRNA-His; tRNA His
D Tbd_R0010 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Tbd_R0040 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Tbd_R0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tbd_R0047 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tbd_R0034 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tbd_R0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tbd_R0015 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tbd_R0049 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tbd_R0042 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tbd_R0050 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tbd_R0051 tRNA-Met K14230 tRNA-Met; tRNA Met
D Tbd_R0001 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Tbd_R0022 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tbd_R0018 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tbd_R0027 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tbd_R0025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tbd_R0029 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tbd_R0030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tbd_R0007 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tbd_R0036 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tbd_R0043 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tbd_R0008 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Tbd_R0005 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Tbd_R0035 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tbd_R0033 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tbd_R0026 tRNA-Val K14237 tRNA-Val; tRNA Val
D Tbd_R0041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tbd_R0009 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tbd_R0012 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tbd_R0038 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tbd_R0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tbd_R0037 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tbd_R0014 SRP RNA; RNA component of signal recognitionparticle K01983 ffs; SRP RNA
D Tbd_R0002 RNA component of RNaseP K01978 rnpB; M1 RNA
D Tbd_R0023 Tbd_R0023 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Tbd_1276 putative NAD/FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D Tbd_1117 acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D Tbd_0128 putative cytochrome C K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D Tbd_0914 hypothetical protein containing twin-arginine translocation pathway signal K24299 tcdH; thiocyanate desulfurase [EC:1.8.2.7]
D Tbd_2632 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Tbd_0847 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Tbd_2631 methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Tbd_1105 methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D Tbd_1930 putative oxidase K17893 AOX1; ubiquinol oxidase [EC:1.10.3.11]
D Tbd_0586 alkyl hydroperoxide reductase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Tbd_2006 peroxiredoxin-like protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Tbd_0999 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Tbd_0174 thiol peroxidase-scavengase P20 oxidoreductase protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Tbd_1112 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Tbd_1118 conserved hypothetical protein DUF209 K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Tbd_2329 flavohemoglobin K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D Tbd_1341 mercuric reductase MerA K00520 merA; mercuric reductase [EC:1.16.1.1]
D Tbd_2358 ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Tbd_1425 Protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Tbd_1585 conserved hypothetical protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Tbd_2695 putative protein-L-isoaspartate o-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Tbd_0836 Protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Tbd_1047 cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Tbd_1109 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Tbd_2162 hypothetical protein K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D Tbd_2584 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Tbd_2043 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D Tbd_2042 arginyl-tRNA:protein arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D Tbd_0740 putative glycosyl transferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D Tbd_2731 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Tbd_0708 probable thiamine biosynthesis lipoprotein apbE precursor transmembrane K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Tbd_2411 putative thaimine biosynthesis protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Tbd_0617 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Tbd_0503 putative glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D Tbd_1277 Putative diguanylate cyclase (GGDEF domain) K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65]
D Tbd_1019 conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D Tbd_0530 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D Tbd_1195 appr-1-p processing phosphatase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D Tbd_2210 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Tbd_1528 phosphoesterase PHP K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Tbd_1087 Phosphohistidine Phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D Tbd_1495 Metal dependent phosphohydrolase, HD region K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D Tbd_0488 putative TatD related DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Tbd_1540 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Tbd_0780 formylmethionine deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Tbd_0014 formylmethionine deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Tbd_0511 carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D Tbd_1086 conserved hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D Tbd_1557 Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D Tbd_0432 conserved hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D Tbd_0626 Protein of unknown function UPF0031 K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Tbd_2008 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent helicase HrpA [EC:5.6.2.6]
D Tbd_2572 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D Tbd_0812 DNA ligase, ATP-dependent K26441 lig; DNA ligase [EC:6.5.1.1]
D Tbd_2018 Electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D Tbd_2017 Electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D Tbd_2016 Electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D Tbd_0709 putative signal peptide protein K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D Tbd_2044 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Tbd_2740 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Tbd_0502 cation-transporting ATPase, E1-E2 type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D Tbd_1169 ferredoxin, 2Fe-2S type K04755 fdx; ferredoxin, 2Fe-2S
D Tbd_0035 7Fe ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain K05524 fdxA; ferredoxin
D Tbd_2019 Electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D Tbd_2020 Electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D Tbd_2015 Electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D Tbd_1165 FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D Tbd_0825 nitric oxide reductase activase protein K02448 norD; nitric oxide reductase NorD protein
D Tbd_0555 putative nitric oxide reductase activation protein K02448 norD; nitric oxide reductase NorD protein
D Tbd_0868 nitric oxide reductase activation protein K02448 norD; nitric oxide reductase NorD protein
D Tbd_2621 cbbO1; rubisco activation protein CbbO K02448 norD; nitric oxide reductase NorD protein
D Tbd_2636 cbbO2; rubisco activation protein cbbO K02448 norD; nitric oxide reductase NorD protein
D Tbd_0560 putative additional subunit of nitric oxide reductase (Nor) complex, membrane protein K02164 norE; nitric oxide reductase NorE protein
D Tbd_2622 cbbQ1; rubisco activation protein CbbQ K04748 norQ; nitric oxide reductase NorQ protein
D Tbd_0869 nitric oxide reductase activation protein NorQ K04748 norQ; nitric oxide reductase NorQ protein
D Tbd_0558 putative nitric oxide reductase activation protein NorQ K04748 norQ; nitric oxide reductase NorQ protein
D Tbd_0824 nitric oxide reductase activation protein NorQ K04748 norQ; nitric oxide reductase NorQ protein
D Tbd_2637 cbbQ2; rubisco activation protein CbbQ K04748 norQ; nitric oxide reductase NorQ protein
D Tbd_1648 heterodisulfide reductase, subunit A K16885 qmoA; quinone-modifying oxidoreductase, subunit QmoA
D Tbd_1647 heterodisulfide reductase, subunit A K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB
D Tbd_0556 iron-sulfur cluster-binding protein K02574 napH; ferredoxin-type protein NapH
D Tbd_0076 hypothetical protein K19344 nirC; cytochrome c55X
D Tbd_0075 heme d1 biosynthesis protein NirF K19345 nirF; protein NirF
D Tbd_2480 putative sulfite reductase K23077 dsrC; dissimilatory sulfite reductase related protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Tbd_2144 possible transmembrane protein K06203 cysZ; CysZ protein
D Tbd_1223 hypothetical protein K08234 yaeR; glyoxylase I family protein
D Tbd_0668 Protein of unknown function UPF0001 K06997 yggS; PLP dependent protein
D Tbd_2418 Protein of unknown function UPF0001 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Tbd_0958 conserved hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D Tbd_0959 putative N-acetylglucosaminyl transferase K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D Tbd_2565 putative protein porphyrin biosynthesis K02498 hemY; HemY protein
D Tbd_0071 Elongator protein 3/MiaB/NifB K24868 nirJ; heme d1 biosynthesis protein
D Tbd_0213 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D Tbd_0994 probable ubiquinone biosynthesis protein K03688 ubiB; ubiquinone biosynthesis protein
D Tbd_0238 conserved hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D Tbd_2183 conserved hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D Tbd_1024 molybdopterin-guanine dinucleotide biosynthesis MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D Tbd_0508 conserved hypothetical protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D Tbd_1056 putative membrane protein K15977 K15977; putative oxidoreductase
D Tbd_2024 long-chain fatty-acid-CoA ligase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Tbd_0679 Possible Cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Tbd_0855 Possible Cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Tbd_0240 Nitrogen regulatory protein P-II (GlnB, GlnK) K04752 glnK; nitrogen regulatory protein P-II 2
D Tbd_1945 conserved hypothetical protein K06959 tex; protein Tex
C 99974 Translation
D Tbd_0095 metallo-beta-lactamase superfamily protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D Tbd_1236 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Tbd_1678 trigger factor K03545 tig; trigger factor
D Tbd_1374 membrane-bound hydrogenase component hupE K03192 ureJ; urease accessory protein
D Tbd_1756 tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D Tbd_1381 hydrogenase expression/formation protein (HUPF/HYPC) K04653 hypC; hydrogenase expression/formation protein HypC
D Tbd_1384 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D Tbd_1386 Hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Tbd_1385 Hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Tbd_0237 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
D Tbd_2046 conserved hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D Tbd_0451 OsmC/Ohr family protein K07397 yhfA; putative redox protein
D Tbd_0186 probable cytochrome c-type biogenesis protein K07399 resB; cytochrome c biogenesis protein
D Tbd_0491 probable transmembrane protein K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D Tbd_2588 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Tbd_0770 conserved hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D Tbd_0012 SMF protein K04096 smf; DNA processing protein
D Tbd_1496 putative helicase ATPase K07478 ycaJ; putative ATPase
D Tbd_2820 conserved hypothetical protein K06919 K06919; putative DNA primase/helicase
D Tbd_2819 conserved hypothetical protein K06919 K06919; putative DNA primase/helicase
D Tbd_1825 putative DNA helicase K07505 repA; regulatory protein RepA
D Tbd_0971 conserved hypothetical protein K07501 K07501; 3'-5' exonuclease
D Tbd_1966 conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D Tbd_1967 conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D Tbd_0928 transposase InsF for insertion sequence IS3A/B/C/D/E/fA K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D Tbd_0516 Conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Tbd_1746 heavy metal efflux pump CzcA K07239 TC.HME; heavy-metal exporter, HME family
D Tbd_2319 probable RND efflux transporter K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Tbd_0212 probable sodium/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Tbd_2725 sodium:alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D Tbd_1529 Intracellular septation protein A K06190 ispZ; intracellular septation protein
D Tbd_1889 conserved hypothetical protein K06320 cgeB; spore maturation protein CgeB
D Tbd_1234 SpoVR like family protein K06415 spoVR; stage V sporulation protein R
D Tbd_2393 peptidase family M23 protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D Tbd_2514 putative lipoprotein K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D Tbd_0772 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Tbd_2325 putative CBS-domain-containing membrane protein K07168 K07168; CBS domain-containing membrane protein
D Tbd_2705 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Tbd_1728 Nucleotide binding protein K07175 phoH2; PhoH-like ATPase
D Tbd_1232 Putative Serine protein kinase, PrkA K07180 prkA; serine protein kinase
D Tbd_0090 CBS signal-transduction protein K07182 K07182; CBS domain-containing protein
D Tbd_1846 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D Tbd_1497 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D Tbd_0385 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D Tbd_0170 outer membrane lipoprotein, putative K06077 slyB; outer membrane lipoprotein SlyB
D Tbd_0794 putative outer membrane protein K06142 hlpA; outer membrane protein
D Tbd_0837 peptidoglycan-binding protein LysM K06194 nlpD; lipoprotein NlpD
D Tbd_2254 conserved hypothetical protein K07290 yhjG; AsmA family protein
D Tbd_1084 HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D Tbd_1581 Secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein
D Tbd_1414 Secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein
D Tbd_0593 conserved hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D Tbd_0025 phosphate uptake regulator PhoU K02039 phoU; phosphate transport system protein
D Tbd_0705 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D Tbd_1311 putative periplasmic glucans biosynthesis signal peptide protein K03670 mdoG; periplasmic glucans biosynthesis protein
D Tbd_2560 divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D Tbd_2292 ABC phosphonate transport system ATPase K05781 phnK; putative phosphonate transport system ATP-binding protein
D Tbd_2231 ApaG protein K06195 apaG; ApaG protein
D Tbd_0227 CyaY protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D Tbd_1391 Nitrous oxidase accessory protein K07218 nosD; nitrous oxidase accessory protein
D Tbd_1325 probable copper resistance protein B K07233 pcoB; copper resistance protein B
D Tbd_1409 conserved hypothetical protein K07234 K07234; uncharacterized protein involved in response to NO
D Tbd_1394 putative lipoprotein involved in nitrous oxide reduction K19342 nosL; copper chaperone NosL
D Tbd_1397 hypothetical protein K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Tbd_1909 colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D Tbd_1642 putative periplasmic protein K04065 osmY; hyperosmotically inducible periplasmic protein
D Tbd_2251 transport-associated K04065 osmY; hyperosmotically inducible periplasmic protein
D Tbd_0774 putative oxygen-binding protein (globin) K06886 glbN; hemoglobin
D Tbd_0057 conserved hypothetical protein K07001 K07001; NTE family protein
D Tbd_0456 HesB-like protein K15724 erpA; iron-sulfur cluster insertion protein
D Tbd_0967 ribonuclease BN K07058 K07058; membrane protein
D Tbd_1570 Cyclic nucleotide-binding domain (cNMP-BD) protein K07058 K07058; membrane protein
D Tbd_1580 conserved hypothetical protein K07100 K07100; putative phosphoribosyl transferase
D Tbd_2561 FxsA protein K07113 fxsA; UPF0716 protein FxsA
D Tbd_0683 rhodanese-like protein K07146 K07146; UPF0176 protein
D Tbd_1204 PhnB protein K04750 phnB; PhnB protein
D Tbd_1721 conserved hypothetical protein K03744 lemA; LemA protein
D Tbd_2427 SlyX protein K03745 slyX; SlyX protein
D Tbd_0011 Smg protein K03747 smg; Smg protein
D Tbd_1910 conserved hypothetical protein K03749 dedD; DedD protein
D Tbd_2518 putative membrane protein K08972 K08972; putative membrane protein
D Tbd_2741 conserved hypothetical protein K08982 K08982; putative membrane protein
D Tbd_0648 hypothetical protein K08982 K08982; putative membrane protein
D Tbd_2287 putative integral membrane protein K08984 yjdF; putative membrane protein
D Tbd_0744 conserved hypothetical protein K08995 K08995; putative membrane protein
D Tbd_0687 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
D Tbd_2600 conserved hypothetical protein K13256 psiE; protein PsiE
C 99997 Function unknown
D Tbd_0361 ankyrin K06867 K06867; uncharacterized protein
D Tbd_2728 conserved hypothetical protein K06867 K06867; uncharacterized protein
D Tbd_1720 conserved hypothetical protein K06872 K06872; uncharacterized protein
D Tbd_2727 conserved hypothetical protein K06888 K06888; uncharacterized protein
D Tbd_0028 ATPase K06923 K06923; uncharacterized protein
D Tbd_2525 conserved hypothetical protein K06929 K06929; uncharacterized protein
D Tbd_0871 conserved hypothetical protein K06940 K06940; uncharacterized protein
D Tbd_2574 esterase K07000 K07000; uncharacterized protein
D Tbd_0632 exporter of the RND superfamily K07003 K07003; uncharacterized protein
D Tbd_0278 conserved hypothetical protein K07018 K07018; uncharacterized protein
D Tbd_2137 esterase/lipase/thioesterase family active site K07019 K07019; uncharacterized protein
D Tbd_1458 conserved hypothetical protein K07028 K07028; uncharacterized protein
D Tbd_1466 conserved hypothetical protein K07028 K07028; uncharacterized protein
D Tbd_2010 hypothetical protein K07039 K07039; uncharacterized protein
D Tbd_0447 putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D Tbd_2605 Protein of unknown function DUF132 K07063 K07063; uncharacterized protein
D Tbd_0894 conserved hypothetical/unknown protein K07064 K07064; uncharacterized protein
D Tbd_1427 putative permease K07089 K07089; uncharacterized protein
D Tbd_2380 conserved hypothetical protein K07090 K07090; uncharacterized protein
D Tbd_2735 conserved hypothetical protein K07090 K07090; uncharacterized protein
D Tbd_1038 uncharacterized conserved membrane protein K07090 K07090; uncharacterized protein
D Tbd_2613 membrane protein, putative K07090 K07090; uncharacterized protein
D Tbd_2673 conserved hypothetical membrane protein K07090 K07090; uncharacterized protein
D Tbd_1423 putative phosphatase K07093 K07093; uncharacterized protein
D Tbd_1651 Protein of unknown function UPF0025 K07095 K07095; uncharacterized protein
D Tbd_2201 probable transmembrane protein K07112 K07112; uncharacterized protein
D Tbd_0145 hypothetical protein with SEL1 repeat K07126 K07126; uncharacterized protein
D Tbd_1737 putative FAD-dependent dehydrogenase K07137 K07137; uncharacterized protein
D Tbd_2187 Conserved hypothetical protein K07139 K07139; uncharacterized protein
D Tbd_0525 peptidase S16 K07157 K07157; uncharacterized protein
D Tbd_2535 Protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Tbd_1053 conserved hypothetical protein K09004 K09004; uncharacterized protein
D Tbd_1837 conserved hypothetical protein K09004 K09004; uncharacterized protein
D Tbd_1843 conserved hypothetical protein K09004 K09004; uncharacterized protein
D Tbd_2663 exported protein K09005 K09005; uncharacterized protein
D Tbd_2386 conserved hypothetical protein K09117 K09117; uncharacterized protein
D Tbd_2158 conserved hypothetical protein K09122 K09122; uncharacterized protein
D Tbd_2620 conserved hypothetical protein K09131 K09131; uncharacterized protein
D Tbd_1037 conserved hypothetical protein K09137 K09137; uncharacterized protein
D Tbd_0268 conserved hypothetical protein K09158 K09158; uncharacterized protein
D Tbd_2465 conserved hypothetical protein K09700 K09700; uncharacterized protein
D Tbd_1530 conserved hypothetical protein K09780 K09780; uncharacterized protein
D Tbd_0220 conserved hypothetical protein K09781 K09781; uncharacterized protein
D Tbd_1233 conserved hypothetical protein K09786 K09786; uncharacterized protein
D Tbd_1924 conserved hypothetical protein K09790 K09790; uncharacterized protein
D Tbd_1506 tetraacyldisaccharide-1-P 4'-kinase K09791 K09791; uncharacterized protein
D Tbd_0252 conserved hypothetical protein K09792 K09792; uncharacterized protein
D Tbd_1754 conserved hypothetical protein K09801 K09801; uncharacterized protein
D Tbd_2653 putative protein K09822 K09822; uncharacterized protein
D Tbd_2516 conserved hypothetical protein K09859 K09859; uncharacterized protein
D Tbd_2365 conserved hypothetical protein K09862 K09862; uncharacterized protein
D Tbd_0804 conserved hypothetical protein K09919 K09919; uncharacterized protein
D Tbd_2527 conserved hypothetical protein K09921 K09921; uncharacterized protein
D Tbd_2660 conserved hypothetical protein K09922 K09922; uncharacterized protein
D Tbd_0638 conserved hypothetical protein K09926 K09926; uncharacterized protein
D Tbd_0605 conserved hypothetical protein K09937 K09937; uncharacterized protein
D Tbd_2592 putative membrane protein K09943 K09943; uncharacterized protein
D Tbd_0062 conserved hypothetical protein K09966 K09966; uncharacterized protein
D Tbd_1197 conserved hypothetical protein K09981 K09981; uncharacterized protein
D Tbd_1867 conserved hypothetical protein K07276 K07276; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 23, 2024