+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Zerene cesonia (dogface butterfly)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        119829232 DNA-directed RNA polymerase II subunit RPB1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        119839564 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        119828692 DNA-directed RNA polymerase II subunit RPB3	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        119834912 DNA-directed RNA polymerase II subunit RPB11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        119830765 DNA-directed RNA polymerase II subunit Rpb4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        119828861 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        119830119 DNA-directed RNA polymerase II subunit RPB9	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        119835300 uncharacterized protein LOC119835300	K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A 
D      Pol I, II, III common subunits
E        119831714 DNA-directed RNA polymerases I	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        119828927 DNA-directed RNA polymerases I	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        119839314 DNA-directed RNA polymerases I	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        119829716 DNA-directed RNA polymerases I	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        119837571 DNA-directed RNA polymerases I	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        119840830 transcription initiation factor IIA subunit 1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        119828605 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        119829663 transcription initiation factor IIB isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        119834636 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119834641 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119830784 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119832337 transcription initiation factor TFIID subunit 1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        119834987 transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        119829055 transcription initiation factor TFIID subunit 3	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        119835468 transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        119836807 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        119839703 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        119830132 transcription initiation factor TFIID subunit 6-like isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        119835905 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        119838221 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        119832774 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        119840117 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        119839317 transcription initiation factor TFIID subunit 10-like isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        119840256 transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        119828913 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        119838267 transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        119831585 general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        119834196 transcription initiation factor IIE subunit beta	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        119830337 general transcription factor IIF subunit 1	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        119831020 general transcription factor IIF subunit 2	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        119829110 general transcription factor IIH subunit 1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        119830885 general transcription factor IIH subunit 2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        119837953 general transcription factor IIH subunit 3	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        119831612 general transcription factor IIH subunit 4	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        119840753 general transcription and DNA repair factor IIH helicase subunit XPB	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        119839182 general transcription and DNA repair factor IIH helicase subunit XPD	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        119840100 general transcription factor IIH subunit 5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        119836810 CDK-activating kinase assembly factor MAT1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        119839128 cyclin-H	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        119828422 mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        119834223 mediator of RNA polymerase II transcription subunit 8	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        119840495 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        119834183 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        119830469 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        119835128 mediator of RNA polymerase II transcription subunit 19	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        119836688 mediator of RNA polymerase II transcription subunit 20	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        119830127 mediator of RNA polymerase II transcription subunit 22	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        119828950 mediator of RNA polymerase II transcription subunit 29	K15142 MED29; mediator of RNA polymerase II transcription subunit 29 
E        119829523 mediator of RNA polymerase II transcription subunit 30	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
D      Middle
E        119830722 mediator of RNA polymerase II transcription subunit 1	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        119838895 mediator of RNA polymerase II transcription subunit 4	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        119833232 mediator of RNA polymerase II transcription subunit 7	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        119834753 mediator of RNA polymerase II transcription subunit 9	K15149 MED9; mediator of RNA polymerase II transcription subunit 9 
E        119840921 mediator of RNA polymerase II transcription subunit 10	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        119836293 mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        119834921 mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        119830372 mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        119830754 mediator of RNA polymerase II transcription subunit 15 isoform X1	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        119836437 mediator of RNA polymerase II transcription subunit 16	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        119833972 cyclin-dependent kinase 8 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        119830366 cyclin-C	K15161 CCNC; cyclin-C 
E        119830371 cyclin-C	K15161 CCNC; cyclin-C 
E        119829980 mediator of RNA polymerase II transcription subunit 12-like isoform X1	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        119834821 mediator of RNA polymerase II transcription subunit 13	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        119835582 mediator of RNA polymerase II transcription subunit 23 isoform X1	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        119828978 mediator of RNA polymerase II transcription subunit 24	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        119837182 mediator of RNA polymerase II transcription subunit 25-like	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        119837683 mediator of RNA polymerase II transcription subunit 26-like	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        119838800 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        119837452 histone acetyltransferase KAT2A isoform X1	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        119832206 transcription-associated protein 1 isoform X1	K08874 TRRAP; transformation/transcription domain-associated protein 
E        119834980 transcription initiation protein SPT3 homolog	K11313 SUPT3H; transcription initiation protein SPT3 
E        119828564 transcriptional adapter 2B isoform X1	K15127 TADA2B; transcriptional adapter 2-beta 
E        119840020 transcriptional adapter 3	K11315 TADA3; transcriptional adapter 3 
E        119833612 transcriptional adapter 1-like	K11317 TADA1; transcriptional adapter 1 
E        119834987 transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        119835468 transcription initiation factor TFIID subunit 4 isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        119836807 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        119839703 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        119830132 transcription initiation factor TFIID subunit 6-like isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        119835905 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        119838221 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        119840117 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        119839317 transcription initiation factor TFIID subunit 10-like isoform X1	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        119828913 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        119828776 SAGA-associated factor 11 homolog isoform X1	K11363 SGF11; SAGA-associated factor 11 
E        119831699 SAGA-associated factor 29	K11364 SGF29; SAGA-associated factor 29 
E        119831688 uncharacterized protein LOC119831688	K11316 SUPT7L; STAGA complex 65 subunit gamma 
E        119834489 mucin-17-like	K11318 ATXN7; ataxin-7 
E        119829764 chromodomain-helicase-DNA-binding protein 1 isoform X1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        119828616 enhancer of yellow 2 transcription factor-like	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        119832591 ubiquitin carboxyl-terminal hydrolase nonstop	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        119828361 splicing factor 3B subunit 3 isoform X1	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        119829999 ATP-dependent helicase brm	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        119836186 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        119828903 SWI/SNF complex subunit SMARCC2 isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        119834810 brahma-associated protein of 60 kDa	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        119837324 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        119832439 actin-5C-like	K05692 ACTB_G1; actin beta/gamma 1 
E        119836531 actin-like protein 6A	K11652 ACTL6B; actin-like protein 6B 
E        119837258 SWI/SNF nucleosome remodeling complex component	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        119838005 protein polybromo-1-like	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        119836186 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
E        119837784 protein polybromo-1-like	K11759 RSC4; chromatin structure-remodeling complex subunit RSC4 
D      Others
E        119834400 RNA polymerase II transcriptional coactivator	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        119838374 cell division cycle and apoptosis regulator protein 1-like	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        119829532 transcription elongation factor S-II	K03145 TFIIS; transcription elongation factor S-II 
E        119830739 transcription elongation factor SPT4-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        119830854 transcription elongation factor SPT4-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        119828682 transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
E        119838635 transcription elongation factor SPT6 isoform X1	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        119828678 transcription termination factor 2 isoform X1	K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
E        119836625 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        119831876 cleavage and polyadenylation specificity factor 73	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        119828304 cleavage and polyadenylation specificity factor subunit 4	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        119836294 serine/threonine-protein phosphatase PP1-beta-like	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        119832757 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        119832791 symplekin	K06100 SYMPK; symplekin 
E        119835870 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        119833598 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        119828434 5'-3' exoribonuclease 2 homolog	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        119830426 decapping and exoribonuclease protein-like	K14845 RAI1; RAT1-interacting protein 
E        119828356 regulation of nuclear pre-mRNA domain-containing protein 1B	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        119834613 hrp65 protein-like isoform X1	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        119834615 hrp65 protein-like isoform X1	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        119833945 SR-related and CTD-associated factor 4-like isoform X1	K13191 RBM16; RNA-binding protein 16 
E        119835484 putative peptidyl-prolyl cis-trans isomerase dodo	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        119837437 RNA polymerase II-associated factor 1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        119830199 parafibromin	K15175 CDC73; parafibromin 
E        119834058 RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        119828979 another transcription unit protein	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        119836118 RNA polymerase-associated protein Rtf1	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        119837956 negative elongation factor A	K15179 WHSC2; negative elongation factor A 
E        119831657 negative elongation factor B	K15180 COBRA1; negative elongation factor B 
E        119829810 negative elongation factor D	K15181 TH1L; negative elongation factor C/D 
E        119831702 negative elongation factor E	K15182 RDBP; negative elongation factor E 
D      Super elongation complex (SEC)
E        119839618 RNA polymerase II elongation factor ELL isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
E        119834445 ell-associated factor Eaf-like	K15186 EAF; ELL-associated factor 
E        119839640 protein ENL	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        119836363 cyclin-T	K15188 CCNT; cyclin T 
E        119839038 cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      Little elongation complex (LEC)
E        119839618 RNA polymerase II elongation factor ELL isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
D      Brd4/P-TEFb complex
E        119830406 bromodomain-containing protein 3-like isoform X1	K11722 BRD4; bromodomain-containing protein 4 
E        119836363 cyclin-T	K15188 CCNT; cyclin T 
E        119839038 cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        119828864 protein HEXIM1 isoform X1	K15189 HEXIM1_2; protein HEXIM1/2 
E        119835131 7SK snRNA methylphosphate capping enzyme bin3-like	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        119834599 la-related protein 7	K15191 LARP7; La-related protein 7 
E        119836363 cyclin-T	K15188 CCNT; cyclin T 
E        119839038 cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      DBIRD complex
D      Others
E        119832174 TATA-binding protein-associated factor 172	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        119830810 protein Dr1	K21751 DR1; down-regulator of transcription 1 
E        119836092 uncharacterized protein LOC119836092	K21752 DRAP1; Dr1-associated corepressor 
E        119833505 protein SPT2 homolog	K15193 SPTY2D1; protein SPT2 
E        119831994 RNA polymerase II subunit A C-terminal domain phosphatase	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        119839746 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        119835969 protein IWS1 homolog	K17498 SPN1; transcription factor SPN1 
E        119835970 serine/arginine-rich splicing factor 4-like	K17498 SPN1; transcription factor SPN1 
E        119840601 cysteine/serine-rich nuclear protein 3	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        119833482 RNA polymerase II-associated protein 1	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        119829869 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        119831780 RNA polymerase II-associated protein 3-like isoform X1	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        119834039 cyclin-K	K23326 CCNK; cyclin K 
E        119836218 GPN-loop GTPase 3-like	K24104 GPN; GPN-loop GTPase 
E        119836220 GPN-loop GTPase 3-like	K24104 GPN; GPN-loop GTPase 
E        119831243 GPN-loop GTPase 1-like	K24104 GPN; GPN-loop GTPase 
E        119831495 GPN-loop GTPase 1-like	K24104 GPN; GPN-loop GTPase 
E        119831499 GPN-loop GTPase 2	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        119828528 DNA-directed RNA polymerase III subunit RPC1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        119835062 DNA-directed RNA polymerase III subunit RPC2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        119828473 DNA-directed RNA polymerases I and III subunit RPAC1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        119833414 probable DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        119837485 DNA-directed RNA polymerase III subunit RPC3	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        119839117 uncharacterized protein LOC119839117	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        119832279 DNA-directed RNA polymerase III subunit RPC5	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        119828539 probable DNA-directed RNA polymerase III subunit RPC6	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        119828316 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        119840804 DNA-directed RNA polymerase III subunit RPC8	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        119835315 DNA-directed RNA polymerase III subunit RPC9-like isoform X1	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        119834815 DNA-directed RNA polymerase III subunit RPC10	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        119831714 DNA-directed RNA polymerases I	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        119828927 DNA-directed RNA polymerases I	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        119839314 DNA-directed RNA polymerases I	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        119829716 DNA-directed RNA polymerases I	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        119837571 DNA-directed RNA polymerases I	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        119836032 zinc finger protein 431-like	K09191 GTF3A; general transcription factor IIIA 
E        119838469 gastrula zinc finger protein XlCGF71.1-like	K09191 GTF3A; general transcription factor IIIA 
E        119838592 zinc finger protein 423-like	K09191 GTF3A; general transcription factor IIIA 
E        119833576 gastrula zinc finger protein XlCGF8.2DB-like	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        119834636 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119834641 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119830784 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119828391 transcription factor IIIB 90 kDa subunit	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        119831852 transcription initiation factor TFIID subunit 3	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        119832067 uncharacterized protein LOC119832067	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        119835036 uncharacterized protein LOC119835036	K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48] 
E        119840878 general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        119830061 general transcription factor 3C polypeptide 6	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        119840878 general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        119836963 snRNA-activating protein complex subunit 1-like	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        119839722 uncharacterized protein LOC119839722	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
E        119834545 silk gland factor 3-like	K09364 POU2F; POU domain transcription factor, class 2 
D      Others
E        119832196 repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        119830677 DNA-directed RNA polymerase I subunit RPA1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        119828473 DNA-directed RNA polymerases I and III subunit RPAC1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        119833414 probable DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        119839241 DNA-directed RNA polymerase I subunit RPA49-like	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        119832267 DNA-directed RNA polymerase I subunit RPA43	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        119837505 DNA-directed RNA polymerase I subunit RPA12	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        119831714 DNA-directed RNA polymerases I	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        119828927 DNA-directed RNA polymerases I	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        119839314 DNA-directed RNA polymerases I	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        119829716 DNA-directed RNA polymerases I	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        119837571 DNA-directed RNA polymerases I	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        119834636 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119834641 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119830784 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        119837922 uncharacterized protein LOC119837922	K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B 
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
E        119834914 RNA polymerase I-specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        119837783 nucleolin 1	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        119830739 transcription elongation factor SPT4-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        119830854 transcription elongation factor SPT4-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        119828682 transcription elongation factor SPT5	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        119833205 chromatin-remodeling complex ATPase chain Iswi isoform X1	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
E        119831090 nucleolar protein dao-5 isoform X1	K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1 
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        119829663 transcription initiation factor IIB isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        119831585 general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
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#Last updated: March 6, 2023