HCAG_02950 hypothetical protein
       HCAG_05324 hypothetical protein
       HCAG_02627 hypothetical protein
       HCAG_00408 hypothetical protein
       HCAG_06081 hypothetical protein
       HCAG_08365 double-strand break repair protein mus-23
       HCAG_03412 hypothetical protein
       HCAG_01262 flap endonuclease

K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
K10865 MRE11; double-strand break repair protein MRE11
K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]

       HCAG_08838 hypothetical protein
       HCAG_03635 uracil-DNA glycosylase
       HCAG_03239 hypothetical protein
       HCAG_04654 similar to OGG1 protein type 2e
       HCAG_07194 hypothetical protein
       HCAG_05891 hypothetical protein
       HCAG_01173 similar to DNA lyase
       HCAG_06498 DNA polymerase delta catalytic subunit
       HCAG_04248 hypothetical protein
       HCAG_06512 hypothetical protein
       HCAG_04928 hypothetical protein
       HCAG_05418 hypothetical protein
       HCAG_03626 hypothetical protein
       HCAG_04835 proliferating cell nuclear antigen
       HCAG_01262 flap endonuclease
       HCAG_07298 similar to cdc17
       HCAG_07892 hypothetical protein
       HCAG_06451 hypothetical protein
       HCAG_05551 hypothetical protein
       HCAG_02863 similar to poly(ADP)-ribose polymerase
       HCAG_05775 hypothetical protein
       HCAG_07177 hypothetical protein
       HCAG_03036 hypothetical protein
       HCAG_01094 hypothetical protein
       HCAG_06420 hypothetical protein
       HCAG_06421 DNA repair protein RAD16
       HCAG_02364 DNA-directed RNA polymerase II largest subunit
       HCAG_04441 DNA-directed RNA polymerase II 138 kDa polypeptide
       HCAG_05932 hypothetical protein
       HCAG_00244 hypothetical protein
       HCAG_06734 DNA-directed RNA polymerases II 24 kDa polypeptide
       HCAG_04864 DNA-directed RNA polymerases I
       HCAG_02811 similar to DNA-directed RNA polymerase II subunit
       HCAG_00906 DNA-directed RNA polymerases i
       HCAG_07360 hypothetical protein
       HCAG_06417 DNA-directed RNA polymerase II 13.3 kDa polypeptide
       HCAG_01496 hypothetical protein
       HCAG_07869 hypothetical protein
       HCAG_08702 DNA repair and recombination protein RAD26
       HCAG_03119 hypothetical protein
       HCAG_00496 similar to DNA repair helicase
       HCAG_06715 DNA repair helicase RAD3
       HCAG_01528 hypothetical protein
       HCAG_06934 suppressor of stem-loop protein 1
       HCAG_00846 hypothetical protein
       HCAG_07759 hypothetical protein
       HCAG_08910 DNA repair protein Rex1
       HCAG_04046 serine/threonine-protein kinase crk1
       HCAG_02903 hypothetical protein
       HCAG_07073 hypothetical protein
       HCAG_02026 hypothetical protein
       HCAG_01084 hypothetical protein
       HCAG_04889 hypothetical protein
       HCAG_03230 hypothetical protein
       HCAG_03337 similar to xeroderma pigmentosum group G complementing factor
       HCAG_02818 hypothetical protein
       HCAG_05900 hypothetical protein
       HCAG_04923 hypothetical protein
       HCAG_07396 hypothetical protein
       HCAG_05457 DNA mismatch repair protein msh-2
       HCAG_06362 similar to DNA mismatch repair protein
       HCAG_06242 similar to DNA mismatch repair protein 6
       HCAG_05977 hypothetical protein
       HCAG_08981 hypothetical protein
       HCAG_03830 similar to replication factor C protein
       HCAG_06861 activator 1 37 kDa subunit
       HCAG_04304 activator 1 37 kDa subunit
       HCAG_03825 activator 1 38 kDa subunit
       HCAG_04902 activator 1 subunit 3
       HCAG_03555 hypothetical protein
       HCAG_05300 hypothetical protein
       HCAG_08365 double-strand break repair protein mus-23
       HCAG_06081 hypothetical protein
       HCAG_03403 DNA repair protein RAD51
       HCAG_01865 hypothetical protein
       HCAG_05612 hypothetical protein
       HCAG_05262 DNA repair and recombination protein RAD54
       HCAG_06823 hypothetical protein
       HCAG_03727 hypothetical protein
       HCAG_05320 DNA topoisomerase III
       HCAG_02971 hypothetical protein
       HCAG_05067 similar to structural maintenance of chromosome protein
       HCAG_03544 hypothetical protein
       HCAG_07580 hypothetical protein
       HCAG_05688 hypothetical protein
       HCAG_00707 hypothetical protein
       HCAG_00331 hypothetical protein
       HCAG_06635 hypothetical protein
       HCAG_03400 hypothetical protein
       HCAG_02375 similar to beta-glucosidase
       HCAG_06808 hypothetical protein
       HCAG_01679 similar to keratinolytic protein
       HCAG_05270 similar to AAA family ATPase
       HCAG_04708 hypothetical protein
       HCAG_02950 hypothetical protein
       HCAG_05324 hypothetical protein
       HCAG_02627 hypothetical protein
       HCAG_00408 hypothetical protein
       HCAG_03412 hypothetical protein
       HCAG_01096 hypothetical protein
       HCAG_04663 hypothetical protein
       HCAG_04626 hypothetical protein
       HCAG_02649 hypothetical protein
       HCAG_04954 hypothetical protein
       HCAG_02874 hypothetical protein
       HCAG_01650 hypothetical protein
       HCAG_07918 hypothetical protein
       HCAG_03749 similar to DNA damage repair protein Mus42
       HCAG_01161 hypothetical protein
       HCAG_08618 ubiquitin-conjugating enzyme E2 2
       HCAG_06511 postreplication repair ubiquitin-protein ligase E3 rad18
       HCAG_02562 similar to dna repair protein rad8
       HCAG_09035 hypothetical protein
       HCAG_01487 ubiquitin conjugating enzyme MmsB
       HCAG_03166 ubiquitin-conjugating enzyme E2-17 kDa
       HCAG_05284 hypothetical protein
       HCAG_08717 hypothetical protein
       HCAG_05118 similar to mitotic and DNA damage checkpoint protein hus1
       HCAG_06080 hypothetical protein
       HCAG_01885 hypothetical protein
       HCAG_07724 hypothetical protein
       HCAG_07673 hypothetical protein
       HCAG_08846 hypothetical protein
       HCAG_07302 hypothetical protein
       HCAG_07229 hypothetical protein
       HCAG_06874 hypothetical protein
       HCAG_07664 similar to UVSB PI-3 kinase
       HCAG_02557 hypothetical protein
       HCAG_04049 hypothetical protein
       HCAG_05898 M-phase inducer phosphatase
       HCAG_04173 14-3-3 protein epsilon
       HCAG_04527 14-3-3 family protein ArtA
       HCAG_06595 forkhead box protein C2
       HCAG_05411 vacuolar protein sorting-associated protein VPS4
       HCAG_05890 hypothetical protein
       HCAG_08282 hypothetical protein
       HCAG_06700 hypothetical protein
       HCAG_04483 hypothetical protein
       HCAG_02506 hypothetical protein
       HCAG_00976 pre-mRNA splicing factor cef-1
       HCAG_05496 hypothetical protein
       HCAG_03437 pre-mRNA splicing factor prp46
       HCAG_04776 deoxyuridine 5'-triphosphate nucleotidohydrolase
       HCAG_05637 ribonucleoside-diphosphate reductase large subunit
       HCAG_09248 similar to ribonucleotide reductase R1 subunit
       HCAG_02604 similar to ribonucleoside-diphosphate reductase R2
       HCAG_01493 hypothetical protein

K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03504 POLD3; DNA polymerase delta subunit 3
K03505 POLD4; DNA polymerase delta subunit 4
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
K10838 XPC; xeroderma pigmentosum group C-complementing protein
K10838 XPC; xeroderma pigmentosum group C-complementing protein
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K10610 DDB1; DNA damage-binding protein 1
K15082 RAD7; DNA repair protein RAD7
K15083 RAD16; DNA repair protein RAD16
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
K10570 ERCC8; DNA excision repair protein ERCC-8
K10841 ERCC6; DNA excision repair protein ERCC-6
K25829 ELOF1; transcription elongation factor 1
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K06634 CCNH; cyclin H
K10842 MNAT1; CDK-activating kinase assembly factor MAT1
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10847 XPA; DNA-repair protein complementing XP-A cells
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10846 ERCC5; DNA excision repair protein ERCC-5
K15075 MET18; DNA repair/transcription protein MET18/MMS19
K03869 CUL3; cullin 3
K03872 ELOC; elongin-C
K15077 ELA1; elongin-A
K08735 MSH2; DNA mismatch repair protein MSH2
K08736 MSH3; DNA mismatch repair protein MSH3
K08737 MSH6; DNA mismatch repair protein MSH6
K10858 PMS2; DNA mismatch repair protein PMS2
K08739 MLH3; DNA mismatch repair protein MLH3
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K24755 WDR76; WD repeat-containing protein 76
K10865 MRE11; double-strand break repair protein MRE11
K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
K04482 RAD51; DNA repair protein RAD51
K10958 RAD57; DNA repair protein RAD57
K10873 RAD52; DNA repair and recombination protein RAD52
K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
K17491 SMEK; protein phosphatase 4 regulatory subunit 3
K22803 SMC5; structural maintenance of chromosomes protein 5
K22804 SMC6; structural maintenance of chromosomes protein 6
K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
K22825 NSMCE4; non-structural maintenance of chromosomes element 4
K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
K10881 SHFM1; 26 proteasome complex subunit DSS1
K10992 SFR1; Swi5-dependent recombination DNA repair protein 1
K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
K11339 MORF4L1; mortality factor 4-like protein 1
K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
K11511 APITD1; centromere protein S
K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
K11137 TELO2; telomere length regulation protein
K15361 WDR48; WD repeat-containing protein 48
K23314 WRAP53; telomerase Cajal body protein 1
K24752 WDR70; WD repeat-containing protein 70
K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
K26957 GCNA; germ cell nuclear acidic protein
K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
K10903 HUS1; HUS1 checkpoint protein
K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
K06662 HRAD17; cell cycle checkpoint protein
K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
K11272 MRC1; mediator of replication checkpoint protein 1
K20403 TTI1; TELO2-interacting protein 1
K23388 UBL4; ubiquitin-like protein 4
K23387 GET4; golgi to ER traffic protein 4
K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
K06630 YWHAE; 14-3-3 protein epsilon
K06630 YWHAE; 14-3-3 protein epsilon
K24664 FKH; forkhead protein FKH
K12196 VPS4; vacuolar protein-sorting-associated protein 4
K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
K15340 DCLRE1A; DNA cross-link repair 1A protein
K17815 EXO5; exonuclease V [EC:3.1.-.-]
K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
K12861 BCAS2; pre-mRNA-splicing factor SPF27
K12862 PLRG1; pleiotropic regulator 1
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]