DNA Repair and Recombination Proteins - Aegilops tauschii (wheat D)

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     KO
 Eukaryotic type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
       DNA glycosylases
       AP endonucleases
       Long Patch-BER factors
         DNA polymerase delta complex
         DNA polymerase epsilon complex
         109750721 LOC109750721; proliferating cell nuclear antigen-like
K04802 PCNA; proliferating cell nuclear antigen 
         109767599 LOC109767599; proliferating cell nuclear antigen
K04802 PCNA; proliferating cell nuclear antigen 
         109782535 LOC109782535; flap endonuclease 1-B-like
K04799 FEN1; flap endonuclease-1 [EC:3.-.-.-] 
         109765737 LOC109765737; flap endonuclease 1-A
K04799 FEN1; flap endonuclease-1 [EC:3.-.-.-] 
         109745687 LOC109745687; DNA ligase 1 isoform X1
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
         109764751 LOC109764751; DNA ligase 6 isoform X1
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
       Short Patch-BER factors
       Other BER factors
     NER (nucleotide excision repair)
       GGR (global genome repair) factors
       TCR (transcription coupled repair) factors
       TFIIH complex
       RPA (replication factor A)
       Other NER factors
         109778025 LOC109778025; DNA excision repair protein ERCC-1
         109742948 LOC109742948; DNA repair endonuclease UVH1 isoform X1
         109731545 LOC109731545; DNA repair protein UVH3
         109745687 LOC109745687; DNA ligase 1 isoform X1
         109764751 LOC109764751; DNA ligase 6 isoform X1
         109732015 LOC109732015; MMS19 nucleotide excision repair protein homolog isoform X1
         109778109 LOC109778109; cullin-3A-like
         109775726 LOC109775726; cullin-3A-like
         109754933 LOC109754933; cullin-3B-like
         109757795 LOC109757795; elongin-C
         109734333 LOC109734333; ubiquitin
         109741532 uncharacterized protein LOC109741532
K10849 ERCC1; DNA excision repair protein ERCC-1 
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] 
K10846 ERCC5; DNA excision repair protein ERCC-5 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
K15075 MET18; DNA repair/transcription protein MET18/MMS19 
K03869 CUL3; cullin 3 
K03869 CUL3; cullin 3 
K03869 CUL3; cullin 3 
K03872 ELOC; elongin-C 
K03873 ELOB; elongin-B 
K15077 ELA1; elongin-A 
     MMR (mismatch excision repair)
       Mismatch and loop recognition factors
       MutS homologs specialized for meiosis
       MutL homologs
       DNA polymerase delta complex
       RPA (replication factor A)
       RFC (replication factor C)
       Other MMR factors
         109750721 LOC109750721; proliferating cell nuclear antigen-like
         109767599 LOC109767599; proliferating cell nuclear antigen
         109763790 LOC109763790; exonuclease 1 isoform X1
         109765088 LOC109765088; exonuclease 1 isoform X1
         109745687 LOC109745687; DNA ligase 1 isoform X1
         109764751 LOC109764751; DNA ligase 6 isoform X1
K04802 PCNA; proliferating cell nuclear antigen 
K04802 PCNA; proliferating cell nuclear antigen 
K10746 EXO1; exonuclease 1 [EC:3.1.-.-] 
K10746 EXO1; exonuclease 1 [EC:3.1.-.-] 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Check point factors
   Other factors with a suspected DNA repair function
 
 Prokaryotic type

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Last updated: September 9, 2019