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KO |
09100 Metabolism
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09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:azc03030]
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03410 Base excision repair [PATH:azc03410]
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03420 Nucleotide excision repair [PATH:azc03420]
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03430 Mismatch repair [PATH:azc03430]
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03440 Homologous recombination [PATH:azc03440]
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03450 Non-homologous end-joining [PATH:azc03450]
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AZC_1005 ATP-dependent DNA ligase protein Ku
AZC_1007 ATP-dependent DNA ligase protein Ku
AZC_1006 ATP-dependent DNA ligase
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K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:azc03000]
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03021 Transcription machinery [BR:azc03021]
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03019 Messenger RNA biogenesis [BR:azc03019]
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03041 Spliceosome
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03011 Ribosome [BR:azc03011]
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03009 Ribosome biogenesis [BR:azc03009]
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03016 Transfer RNA biogenesis [BR:azc03016]
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03012 Translation factors [BR:azc03012]
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03110 Chaperones and folding catalysts [BR:azc03110]
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04131 Membrane trafficking [BR:azc04131]
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04121 Ubiquitin system [BR:azc04121]
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03051 Proteasome [BR:azc03051]
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03032 DNA replication proteins [BR:azc03032]
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03036 Chromosome and associated proteins [BR:azc03036]
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03400 DNA repair and recombination proteins [BR:azc03400]
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AZC_2824 deoxyribodipyrimidine photolyase
AZC_0456 mutY; A/G-specific adenine glycosylase
AZC_3684 endonuclease III/Nth precursor
AZC_0874 endonuclease
AZC_0315 NTP pyrophosphohydrolase
AZC_0398 putative ADP-ribose phosphohydrolase precursor
AZC_0707 deoxy UTP pyrophosphatase subfamily 1
AZC_3682 methylated-DNA-(protein)-cysteine S-methyltransferase
AZC_2742 uncharacterized protein
AZC_4284 alkylated DNA repair protein
AZC_0251 phage SPO1 DNA polymerase-related protein
AZC_1251 uracil-DNA glycosylase superfamily protein
AZC_3006 phage SPO1 DNA polymerase-related protein
AZC_3494 phage SPO1 DNA polymerase-related protein
AZC_0371 HhH-GPD protein
AZC_0402 DNA-3-methyladenine glycosylase I
AZC_0800 formamidopyrimidine-DNA glycolase
AZC_2812 exodeoxyribonuclease III
AZC_1397 exodeoxyribonuclease III protein
AZC_0093 exodeoxyribonuclease III protein
AZC_1851 recJ; RecJ exonuclease
AZC_0149 NAD-dependent DNA ligase
AZC_4464 DNA polymerase A
AZC_2887 excinuclease ABC A subunit
AZC_3127 excinuclease ABC B subunit
AZC_3966 excinuclease ABC C subunit
AZC_4475 DNA helicase II
AZC_0887 DNA-directed RNA polymerase beta subunit
AZC_0888 RNA polymerase I subunit A
AZC_2530 DNA-directed RNA polymerase alpha subunit
AZC_1253 RNA polymerase omega subunit
AZC_1221 transcription-repair coupling factor
AZC_4714 mutS; DNA mismatch repair protein
AZC_2393 DNA mismatch repair protein
AZC_2385 exodeoxyribonuclease VII large subunit
AZC_3116 exonuclease VII small subunit
AZC_1691 DNA polymerase III alpha subunit
AZC_1013 DNA polymerase III beta chain
AZC_0540 DNA polymerase III chi subunit
AZC_0569 DNA polymerase III
AZC_2174 putative DNA polymerase III delta prime subunit
AZC_2481 putative exonuclease
AZC_0005 DNA polymerase III
AZC_0142 ATPase
AZC_2886 single-stranded DNA-binding protein
AZC_2855 recA; RecA protein
AZC_0515 ruvA; DNA recombination protein
AZC_0519 ruvB; holliday junction DNA helicase
AZC_0513 ruvC; crossover junction endodeoxyribonuclease
AZC_4144 primosomal protein
AZC_0533 radA; DNA repair protein
AZC_1012 recF; DNA replication and repair protein
AZC_1725 helicase
AZC_2006 recO; recombination protein O
AZC_0147 recR; recombination protein
AZC_4568 recN; DNA repair protein
AZC_0714 putative exonuclease V
AZC_0713 conserved hypothetical protein
AZC_3059 protein of unknown function
AZC_1005 ATP-dependent DNA ligase protein Ku
AZC_1007 ATP-dependent DNA ligase protein Ku
AZC_1006 ATP-dependent DNA ligase
AZC_2328 DNA gyrase subunit A
AZC_1009 DNA gyrase B subunit
AZC_1861 DNA topoisomerase I
AZC_2284 topoisomerase IB
AZC_1611 histone-like bacterial DNA-binding protein
AZC_2293 integration host factor alpha subunit
AZC_3716 integration host factor beta subunit
AZC_2842 recQ; ATP-dependent DNA helicase
AZC_1852 DNA-directed DNA polymerase
AZC_2201 lexA; peptidase S24 protein
AZC_3906 hypothetical protein
AZC_3905 conserved hypothetical cytosolic protein precursor
AZC_3904 DNA polymerase III alpha subunit
AZC_0109 helicase
AZC_1268 ribonucleotide reductase large subunit
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K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K05986 NUCS; nuclease S1 [EC:3.1.30.1]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:azc03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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