| |
KO |
 Eukaryotic type
|
|
|
 Prokaryotic type
|
SSBR (single strand breaks repair)
|
Direct repair
|
BER (base exicision repair)
|
 DNA glycosylases
|
AP endonucleases
|
RecJ
|
AB162_129 recJ; Single-stranded-DNA-specific exonuclease RecJ
|
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
|
DNA ligase
|
DNA polymerase I
|
NER (nucleotide excision repair)
|
MMR (mismatch excision repair)
|
DSBR (double strand breaks repair)
|
HR (homologous recombination)
|
RecBC pathway proteins
|
RecFOR pathway proteins
|
AB162_181 recA; RecA protein
AB162_569 radA; DNA repair protein
AB162_090 recG; ATP-dependent DNA helicase RecG
AB162_129 recJ; Single-stranded-DNA-specific exonuclease RecJ
AB162_258 ruvA; Holliday junction DNA helicase
AB162_257 ruvB; Holliday junction DNA helicase
AB162_259 ruvC; Crossover junction endodeoxyribonuclease
|
K03553 recA; recombination protein RecA
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
|
AddAB pathway proteins
|
Other HR factor
|
Archaeal homologous recombinant proteins
|
NHEJ (non-homologous end-joining)
|
Two-component NHEJ DNA repair complex
|
SHIIR (short-homology-independent illegitimate recombination)
|
SHDIR (short-homology-dependent illegitimate recombination)
|
RecET pathway
|
AB162_129 recJ; Single-stranded-DNA-specific exonuclease RecJ
AB162_048 ligA; DNA ligase
|
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
|
Facilitator
|
Supressor
|
TLS (translesion DNA synthesis) factors
|
Other factors with a suspected DNA repair function
|
DNA Repair and Recombination Proteins - Candidatus Baumannia cicadellinicola B-GSS