DNA Repair and Recombination Proteins - Botrytis cinerea

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     KO
 Eukaryotic Type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
       DNA glycosylases
       AP endonucleases
       Long Patch-BER factors
         DNA polymerase delta complex
         DNA polymerase epsilon complex
         BCIN_01g06320 Bcpol30
K04802 PCNA; proliferating cell nuclear antigen 
         BCIN_02g04900 hypothetical protein
K04799 FEN1; flap endonuclease-1 [EC:3.-.-.-] 
         BCIN_02g06040 hypothetical protein
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
       Short Patch-BER factors
       Other BER factors
     NER (nucleotide excision repair)
       GGR (global genome repair) factors
       TCR (transcription coupled repair) factors
       TFIIH complex
       RPA (replication factor A)
       Other NER factors
         BCIN_07g02310 Bcrad14
         BCIN_11g00250 Bcrad10
         BCIN_09g06220 Bcrad1; Bcrad1
         BCIN_06g00590 hypothetical protein
         BCIN_02g06040 hypothetical protein
         BCIN_15g01610 Bcmet18
         BCIN_03g08660 hypothetical protein
         BCIN_13g02530 Bcelc1; Bcelc1
         BCIN_07g02700 hypothetical protein
K10847 XPA; DNA-repair protein complementing XP-A cells 
K10849 ERCC1; DNA excision repair protein ERCC-1 
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] 
K10846 ERCC5; DNA excision repair protein ERCC-5 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
K15075 MET18; DNA repair/transcription protein MET18/MMS19 
K03869 CUL3; cullin 3 
K03872 ELOC; elongin-C 
K15077 ELA1; elongin-A 
     MMR (mismatch excision repair)
       Mismatch and loop recognition factors
       MutS homologs specialized for meiosis
       MutL homologs
       DNA polymerase delta complex
       RPA (replication factor A)
       RFC (replication factor C)
       Other MMR factors
         BCIN_01g06320 Bcpol30
         BCIN_02g08430 hypothetical protein
         BCIN_02g06040 hypothetical protein
K04802 PCNA; proliferating cell nuclear antigen 
K10746 EXO1; exonuclease 1 [EC:3.1.-.-] 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Check point factors
   Other factors with a suspected DNA repair function
 
 Prokaryotic Type

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Last updated: May 16, 2019