09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:btei03030]
03410 Base excision repair [PATH:btei03410]
03420 Nucleotide excision repair [PATH:btei03420]
03430 Mismatch repair [PATH:btei03430]
03440 Homologous recombination [PATH:btei03440]
03450 Non-homologous end-joining [PATH:btei03450]
WS51_27060 DNA-binding protein WS51_27065 DNA ligase
K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:btei03000]
03021 Transcription machinery [BR:btei03021]
03019 Messenger RNA biogenesis [BR:btei03019]
03041 Spliceosome
03011 Ribosome [BR:btei03011]
03009 Ribosome biogenesis [BR:btei03009]
03016 Transfer RNA biogenesis [BR:btei03016]
03012 Translation factors [BR:btei03012]
03110 Chaperones and folding catalysts [BR:btei03110]
04131 Membrane trafficking [BR:btei04131]
04121 Ubiquitin system
03051 Proteasome [BR:btei03051]
03032 DNA replication proteins [BR:btei03032]
03036 Chromosome and associated proteins [BR:btei03036]
03400 DNA repair and recombination proteins [BR:btei03400]
WS51_01215 cysteine methyltransferase WS51_23245 cysteine methyltransferase WS51_05360 deoxyribodipyrimidine photolyase WS51_12990 uracil-DNA glycosylase WS51_24230 3-methyladenine DNA glycosylase WS51_24340 A/G-specific adenine glycosylase WS51_22025 endonuclease III WS51_05170 ATP-dependent DNA helicase WS51_13220 7,8-dihydro-8-oxoguanine-triphosphatase WS51_18855 NUDIX hydrolase WS51_27385 NUDIX hydrolase WS51_23020 deoxyuridine 5'-triphosphate nucleotidohydrolase WS51_26185 AraC family transcriptional regulator WS51_05340 deoxyribodipyrimidine photolyase WS51_24235 DNA glycosylase WS51_26985 hydroxyacid dehydrogenase WS51_20550 DNA polymerase WS51_20740 DNA-3-methyladenine glycosylase WS51_26180 3-methyladenine DNA glycosylase 2 WS51_01220 adenosine deaminase WS51_11625 DNA-3-methyladenine glycosidase WS51_24345 formamidopyrimidine-DNA glycosylase WS51_21065 exodeoxyribonuclease III WS51_25885 exodeoxyribonuclease III WS51_20925 single-stranded-DNA-specific exonuclease RecJ WS51_20460 ligA; aromatic ring-opening dioxygenase LigA WS51_02795 DNA polymerase I WS51_29215 excinuclease ABC subunit A WS51_24250 ABC-ATPase UvrA WS51_21410 excinuclease ABC subunit B WS51_15965 excinuclease ABC subunit C WS51_17440 DNA helicase II WS51_12140 rpoB; DNA-directed RNA polymerase subunit beta WS51_12145 DNA-directed RNA polymerase subunit beta' WS51_12310 DNA-directed RNA polymerase subunit alpha WS51_15215 DNA-directed RNA polymerase subunit omega WS51_20120 transcription-repair coupling factor WS51_20790 DNA mismatch repair protein MutS WS51_14110 mutL; DNA mismatch repair protein MutL WS51_23160 exodeoxyribonuclease VII large subunit WS51_02820 exodeoxyribonuclease VII small subunit WS51_21955 dnaE; DNA polymerase III subunit alpha WS51_10820 DNA polymerase III subunit beta WS51_22595 DNA polymerase III subunit chi WS51_13605 DNA polymerase III subunit delta WS51_19850 DNA polymerase III subunit delta' WS51_15260 DNA polymerase III subunit epsilon WS51_16755 DNA polymerase III subunit epsilon WS51_10575 DNA polymerase III subunit epsilon WS51_19535 DNA polymerase III subunit gamma/tau WS51_24240 single-stranded DNA-binding protein WS51_16450 exodeoxyribonuclease V subunit beta WS51_16445 exodeoxyribonuclease V subunit gamma WS51_16455 exodeoxyribonuclease V subunit alpha WS51_23675 recA; DNA recombination/repair protein RecA WS51_13770 Holliday junction ATP-dependent DNA helicase RuvA WS51_13765 ATP-dependent DNA helicase RuvB WS51_13775 Holliday junction resolvase WS51_11380 primosomal protein N' WS51_19755 primosomal replication protein N WS51_20525 DNA repair protein RadA WS51_13925 ATP-dependent DNA helicase RecG WS51_15930 DNA repair protein RecO WS51_19525 recR; recombination protein RecR WS51_14015 DNA repair protein RecN WS51_29395 recombination-associated protein RdgC WS51_27060 DNA-binding protein WS51_27065 DNA ligase WS51_15450 DNA gyrase subunit A WS51_10825 gyrB; DNA gyrase subunit B WS51_29265 DNA topoisomerase WS51_11165 DNA-binding protein WS51_13785 Fis family transcriptional regulator WS51_17655 integration host factor subunit alpha WS51_15490 integration host factor subunit beta WS51_12150 ATP-dependent DNA helicase RecQ WS51_11645 H-NS histone WS51_11810 H-NS histone WS51_28235 H-NS histone WS51_28580 H-NS histone WS51_04230 H-NS histone WS51_29520 histone WS51_00700 hypothetical protein WS51_01190 DNA-binding protein WS51_10255 H-NS histone WS51_21050 DNA polymerase IV WS51_18540 LexA family transcriptional regulator WS51_00430 DNA polymerase II WS51_24500 recombinase RecA WS51_24495 DNA polymerase WS51_24490 DNA polymerase WS51_23670 recombinase RecX WS51_03965 DNA-binding protein WS51_11570 ATP-dependent DNA helicase Rep WS51_19375 helicase WS51_04210 ATP-dependent DNA helicase WS51_13335 ribonucleotide-diphosphate reductase subunit alpha WS51_27830 ribonucleotide reductase-like protein WS51_13340 ribonucleotide-diphosphate reductase subunit beta
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03555 mutS; DNA mismatch repair protein MutS K03572 mutL; DNA mismatch repair protein MutL K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K02686 priB; primosomal replication protein N K04485 radA; DNA repair protein RadA/Sms K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K03554 rdgC; recombination associated protein RdgC K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein K04764 ihfA; integration host factor subunit alpha K05788 ihfB; integration host factor subunit beta K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K03746 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K01356 lexA; repressor LexA [EC:3.4.21.88] K02336 polB; DNA polymerase II [EC:2.7.7.7] K14160 imuA; protein ImuA K14161 imuB; protein ImuB K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K03565 recX; regulatory protein K02347 polX; DNA polymerase (family X) K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
03029 Mitochondrial biogenesis [BR:btei03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite