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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:bvi03030]
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03410 Base excision repair [PATH:bvi03410]
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03420 Nucleotide excision repair [PATH:bvi03420]
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03430 Mismatch repair [PATH:bvi03430]
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03440 Homologous recombination [PATH:bvi03440]
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03450 Non-homologous end-joining [PATH:bvi03450]
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 Bcep1808_6895 DNA end-binding protein Ku
Bcep1808_5734 Ku domain protein
Bcep1808_6891 ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module
Bcep1808_5735 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module
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K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:bvi03000]
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03021 Transcription machinery [BR:bvi03021]
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03019 Messenger RNA biogenesis [BR:bvi03019]
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03041 Spliceosome
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03011 Ribosome [BR:bvi03011]
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03009 Ribosome biogenesis [BR:bvi03009]
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03016 Transfer RNA biogenesis [BR:bvi03016]
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03012 Translation factors [BR:bvi03012]
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03110 Chaperones and folding catalysts [BR:bvi03110]
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04131 Membrane trafficking [BR:bvi04131]
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04121 Ubiquitin system [BR:bvi04121]
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03051 Proteasome [BR:bvi03051]
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03032 DNA replication proteins [BR:bvi03032]
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03036 Chromosome and associated proteins [BR:bvi03036]
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03400 DNA repair and recombination proteins [BR:bvi03400]
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Bcep1808_3985 methylated-DNA--protein-cysteine methyltransferase
Bcep1808_2653 methylated-DNA--protein-cysteine methyltransferase
Bcep1808_5895 deoxyribodipyrimidine photo-lyase type I
Bcep1808_0506 Uracil-DNA glycosylase
Bcep1808_2902 A/G-specific DNA-adenine glycosylase
Bcep1808_2416 DNA-(apurinic or apyrimidinic site) lyase
Bcep1808_4917 helicase c2
Bcep1808_0547 NUDIX hydrolase
Bcep1808_4598 NUDIX hydrolase
Bcep1808_5847 NUDIX hydrolase
Bcep1808_2593 deoxyuridine 5'-triphosphate nucleotidohydrolase
Bcep1808_7670 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Bcep1808_3300 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada
Bcep1808_5898 deoxyribodipyrimidine photolyase-related protein
Bcep1808_5717 phage SPO1 DNA polymerase-related protein
Bcep1808_1949 phage SPO1 DNA polymerase-related protein
Bcep1808_3299 DNA-3-methyladenine glycosylase II
Bcep1808_1979 HhH-GPD family protein
Bcep1808_0203 DNA-3-methyladenine glycosylase I
Bcep1808_2903 DNA-(apurinic or apyrimidinic site) lyase
Bcep1808_2224 Exodeoxyribonuclease III
Bcep1808_3189 exodeoxyribonuclease III Xth
Bcep1808_2195 exonuclease RecJ
Bcep1808_1931 DNA ligase, NAD-dependent
Bcep1808_4248 DNA polymerase I
Bcep1808_2884 Excinuclease ABC subunit A
Bcep1808_6497 UvrA family protein
Bcep1808_2295 Excinuclease ABC subunit B
Bcep1808_1062 Excinuclease ABC subunit C
Bcep1808_1404 ATP-dependent DNA helicase UvrD
Bcep1808_0322 DNA-directed RNA polymerase subunit beta
Bcep1808_0323 DNA-directed RNA polymerase subunit beta'
Bcep1808_0356 DNA-directed RNA polymerase subunit alpha
Bcep1808_0917 DNA-directed RNA polymerase subunit omega
Bcep1808_1871 transcription-repair coupling factor
Bcep1808_2168 DNA mismatch repair protein MutS
Bcep1808_0724 DNA mismatch repair protein MutL
Bcep1808_2637 Exodeoxyribonuclease VII large subunit
Bcep1808_6808 Exodeoxyribonuclease VII large subunit
Bcep1808_4255 Exodeoxyribonuclease VII small subunit
Bcep1808_6807 conserved hypothetical protein
Bcep1808_2402 DNA polymerase III, alpha subunit
Bcep1808_0002 DNA polymerase III, beta subunit
Bcep1808_2548 DNA polymerase III chi subunit, HolC
Bcep1808_0624 DNA polymerase III, delta subunit
Bcep1808_1816 DNA polymerase III, delta prime subunit
Bcep1808_3849 DNA polymerase III, epsilon subunit
Bcep1808_0926 DNA polymerase III, epsilon subunit
Bcep1808_1237 DNA polymerase III, epsilon subunit
Bcep1808_1754 DNA polymerase III, subunits gamma and tau
Bcep1808_2882 single-strand binding protein
Bcep1808_6627 single-strand binding protein
Bcep1808_7080 single-strand binding protein
Bcep1808_7304 single-strand binding protein
Bcep1808_6233 DNA helicase/exodeoxyribonuclease V, beta subunit
Bcep1808_1125 exodeoxyribonuclease V, beta subunit
Bcep1808_1124 exodeoxyribonuclease V, gamma subunit
Bcep1808_6234 DNA helicase/exodeoxyribonuclease V, gamma subunit
Bcep1808_6232 DNA helicase/exodeoxyribonuclease V, alpha subunit
Bcep1808_1126 exodeoxyribonuclease V, alpha subunit
Bcep1808_2081 AAA ATPase
Bcep1808_2763 recA protein
Bcep1808_0654 Holliday junction DNA helicase RuvA
Bcep1808_0653 Holliday junction DNA helicase RuvB
Bcep1808_0655 crossover junction endodeoxyribonuclease RuvC
Bcep1808_0121 primosomal protein N'
Bcep1808_1799 primosomal replication protein N-like protein
Bcep1808_7131 putative ATPase involved in DNA repair
Bcep1808_7129 DNA repair exonuclease-like protein
Bcep1808_1944 DNA replication and repair protein RadA
Bcep1808_0685 ATP-dependent DNA helicase RecG
Bcep1808_5524 putative transcriptional regulator
Bcep1808_6734 helicase domain protein
Bcep1808_1055 DNA replication and repair protein RecO
Bcep1808_1752 recombination protein RecR
Bcep1808_0704 DNA replication and repair protein RecN
Bcep1808_6653 putative exonuclease, RdgC
Bcep1808_7719 putative exonuclease, RdgC
Bcep1808_4371 DEAD/DEAH box helicase domain protein
Bcep1808_6895 DNA end-binding protein Ku
Bcep1808_5734 Ku domain protein
Bcep1808_6891 ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module
Bcep1808_5735 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module
Bcep1808_0961 DNA gyrase subunit A
Bcep1808_0003 DNA gyrase subunit B
Bcep1808_6553 DNA topoisomerase, type I, putative
Bcep1808_7349 TOPRIM domain protein
Bcep1808_0074 histone family protein DNA-binding protein
Bcep1808_5520 histone family protein DNA-binding protein
Bcep1808_1153 RecT protein
Bcep1808_4505 RecT protein
Bcep1808_0657 transcriptional regulator, Fis family
Bcep1808_1445 integration host factor, alpha subunit
Bcep1808_0969 integration host factor, beta subunit
Bcep1808_0324 ATP-dependent DNA helicase RecQ
Bcep1808_7011 nucleoid protein H-NS
Bcep1808_7427 histone family protein nucleoid-structuring protein H-NS
Bcep1808_0241 histone family protein nucleoid-structuring protein H-NS
Bcep1808_3688 histone family protein nucleoid-structuring protein H-NS
Bcep1808_5622 histone family protein nucleoid-structuring protein H-NS
Bcep1808_5750 histone family protein nucleoid-structuring protein H-NS
Bcep1808_6150 histone family protein nucleoid-structuring protein H-NS
Bcep1808_6205 histone family protein nucleoid-structuring protein H-NS
Bcep1808_6219 histone family protein nucleoid-structuring protein H-NS
Bcep1808_6594 histone family protein nucleoid-structuring protein H-NS
Bcep1808_7141 histone family protein nucleoid-structuring protein H-NS
Bcep1808_7148 histone family protein nucleoid-structuring protein H-NS
Bcep1808_7418 histone family protein nucleoid-structuring protein H-NS
Bcep1808_7557 histone family protein nucleoid-structuring protein H-NS
Bcep1808_7628 histone-like nucleoid-structuring protein H-NS
Bcep1808_0207 histone family protein nucleoid-structuring protein H-NS
Bcep1808_6498 histone family protein nucleoid-structuring protein H-NS
Bcep1808_5545 histone family protein nucleoid-structuring protein H-NS
Bcep1808_2222 DNA-directed DNA polymerase
Bcep1808_1552 SOS-response transcriptional repressor, LexA
Bcep1808_3890 DNA damage-inducible DNA polymerase II
Bcep1808_2932 conserved hypothetical protein
Bcep1808_2009 hypothetical protein
Bcep1808_7144 conserved hypothetical protein
Bcep1808_2931 conserved hypothetical protein
Bcep1808_2008 conserved hypothetical protein
Bcep1808_7143 conserved hypothetical protein
Bcep1808_7142 DNA polymerase III, alpha subunit
Bcep1808_2007 error-prone DNA polymerase, DnaE-like protein
Bcep1808_2930 DNA polymerase III, alpha subunit
Bcep1808_2762 regulatory protein RecX
Bcep1808_0155 UvrD/REP helicase
Bcep1808_1722 helicase c2
Bcep1808_4745 ATP dependent helicase, Lhr family
Bcep1808_6310 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
Bcep1808_6742 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
Bcep1808_0570 ribonucleoside-diphosphate reductase, alpha subunit
Bcep1808_0571 Ribonucleoside-diphosphate reductase
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K03554 rdgC; recombination associated protein RdgC
K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K07455 recT; recombination protein RecT
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K02336 polB; DNA polymerase II [EC:2.7.7.7]
K14160 imuA; protein ImuA
K14160 imuA; protein ImuA
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14161 imuB; protein ImuB
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:bvi03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Burkholderia vietnamiensis G4