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KO |
 09100 Metabolism
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 09101 Carbohydrate metabolism
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09102 Energy metabolism
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09103 Lipid metabolism
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09104 Nucleotide metabolism
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09105 Amino acid metabolism
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09106 Metabolism of other amino acids
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00410 beta-Alanine metabolism [PATH:cmi00410]
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00430 Taurine and hypotaurine metabolism [PATH:cmi00430]
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00440 Phosphonate and phosphinate metabolism [PATH:cmi00440]
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00450 Selenocompound metabolism [PATH:cmi00450]
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00460 Cyanoamino acid metabolism [PATH:cmi00460]
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00470 D-Amino acid metabolism [PATH:cmi00470]
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 CMM_2573 alrA2; putative alanine racemase
CMM_2574 alrA1; putative alanine racemase
CMM_2970 ddlB; putative D-alanine-D-alanine ligase
CMM_1346 ddlC; D-alanine-D-alanine ligase
CMM_0263 ddlA; putative D-alanine--D-alanine ligase
CMM_0029 glsA; putative glutaminase
CMM_0729 purQ; phosphoribosylformylglycinamidine synthase I
CMM_1294 murI; glutamate racemase (YP_062293.1| glutamate racemase [Leifsonia xyli subsp. xyli str. CTCB07]; ZP_00228323.1| COG0796: Glutamate racemase [Kineococcus radiotolerans SRS30216]). Provides the (R)-glutamate required for cell wall biosynthesis (By similarity). pfam01177,Asp_Glu_race, Asp/Glu/Hydantoin racemase. This family contains aspartate racemase, glutamate racemase, hydantoin racemase and arylmalonate decarboxylase. glut_race: glutamate racemase.; High confidence in function and specificity
CMM_1861 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
CMM_2021 dapF; diaminopimelate epimerase (ZP_00226410.1| COG0253: Diaminopimelate epimerase [Kineococcus radiotolerans SRS30216]; O69969|DAPF_STRCO Diaminopimelate epimerase (DAP epimerase)). pfam01678, DAP_epimerase,Diaminopimelate epimerase (twice). InterPro: Diaminopimelate epimerase DapF: diaminopimelate epimerase; High confidence in function and specificity
CMM_1152 lysA; Diaminopimelate decarboxylase (DAP decarboxylase)(YP_061724.1| diaminopimelate decarboxylase [Leifsonia xyli subsp. xyli str. CTCB07]; ZP_00228463.1| COG0019: Diaminopimelate decarboxylase [Kineococcus radiotolerans SRS30216]). pfam02784, Orn_Arg_deC_N,Pyridoxal-dependent decarboxylase, pyridoxal binding domain. pfam00278, Orn_DAP_Arg_deC, Pyridoxal-dependent decarboxylase, C-terminal sheet domain.; High confidence in function and specificity
CMM_0811 putative proline racemase
CMM_0809 putative amino acid oxidase
CMM_0807 putative secreted D-amino acid oxidase
CMM_0808 conserved hypothetical protein
CMM_0810 dapX; dihydrodipicolinate synthase
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K01775 alr; alanine racemase [EC:5.1.1.1]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01425 glsA; glutaminase [EC:3.5.1.2]
K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
K01776 murI; glutamate racemase [EC:5.1.1.3]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
K01777 prdF; proline racemase [EC:5.1.1.4]
K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-]
K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma
K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
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00480 Glutathione metabolism [PATH:cmi00480]
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09107 Glycan biosynthesis and metabolism
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00510 N-Glycan biosynthesis
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00513 Various types of N-glycan biosynthesis
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00512 Mucin type O-glycan biosynthesis
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00515 Mannose type O-glycan biosynthesis [PATH:cmi00515]
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00514 Other types of O-glycan biosynthesis [PATH:cmi00514]
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00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
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00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
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00533 Glycosaminoglycan biosynthesis - keratan sulfate
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00531 Glycosaminoglycan degradation
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00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
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00601 Glycosphingolipid biosynthesis - lacto and neolacto series
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00603 Glycosphingolipid biosynthesis - globo and isoglobo series
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00604 Glycosphingolipid biosynthesis - ganglio series
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00511 Other glycan degradation [PATH:cmi00511]
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00540 Lipopolysaccharide biosynthesis [PATH:cmi00540]
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00542 O-Antigen repeat unit biosynthesis [PATH:cmi00542]
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00541 O-Antigen nucleotide sugar biosynthesis [PATH:cmi00541]
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00550 Peptidoglycan biosynthesis [PATH:cmi00550]
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CMM_1343 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
CMM_2791 murB; UDP-N-acetylenolpyruvoylglucosamine reductase (YP_061420.1| UDP-N-acetylmuramate dehydrogenase [Leifsonia xyli subsp. xyli str. CTCB07]; Q9L0L7|MURB_STRCO UDP-N-acetylenolpyruvoylglucosamine reductase). pfam01565, FAD_binding_4, FAD binding domain. pfam02873, MurB_C, UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain. InterPro: UDP-N-acetylenolpyruvoylglucosamine reductase.; High confidence in function and specificity
CMM_1858 murC; putative UDP-N-acetylmuramate--alanine ligase
CMM_1861 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
CMM_1864 murE; putative UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
CMM_2970 ddlB; putative D-alanine-D-alanine ligase
CMM_1346 ddlC; D-alanine-D-alanine ligase
CMM_0263 ddlA; putative D-alanine--D-alanine ligase
CMM_1863 murF; putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--
CMM_1579 uppS1; putative undecaprenyl pyrophosphate synthetase
CMM_1695 bacA; undecaprenol kinase
CMM_1862 mraY; putative phospho-N-acetylmuramoyl-pentapeptide-transferase
CMM_1859 murG; putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyr
CMM_1865 ftsI; putative peptidoglycan glycosyltransferase/penicillin-binding protein
CMM_0017 pbpA; penicillin-binding protein
CMM_1708 pbpX; probable D-alanyl-D-alanine carboxypeptidase
CMM_2067 dacB; D-alanyl-D-alanine carboxypeptidase
CMM_0931 pbpE; D-alanyl-D-alanine carboxypeptidase
CMM_1647 murX; putative UDP-N-acetylmuramyl tripeptide synthase
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K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K05364 pbpA; penicillin-binding protein A
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
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00552 Teichoic acid biosynthesis [PATH:cmi00552]
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00571 Lipoarabinomannan (LAM) biosynthesis
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00572 Arabinogalactan biosynthesis - Mycobacterium
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00543 Exopolysaccharide biosynthesis [PATH:cmi00543]
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09108 Metabolism of cofactors and vitamins
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09109 Metabolism of terpenoids and polyketides
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09110 Biosynthesis of other secondary metabolites
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09111 Xenobiotics biodegradation and metabolism
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09112 Not included in regular maps
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09120 Genetic Information Processing
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09161 Cancer: overview
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09162 Cancer: specific types
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09172 Infectious disease: viral
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09171 Infectious disease: bacterial
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09174 Infectious disease: parasitic
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09163 Immune disease
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09164 Neurodegenerative disease
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09165 Substance dependence
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09166 Cardiovascular disease
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09167 Endocrine and metabolic disease
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09175 Drug resistance: antimicrobial
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01501 beta-Lactam resistance [PATH:cmi01501]
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01502 Vancomycin resistance [PATH:cmi01502]
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CMM_2970 ddlB; putative D-alanine-D-alanine ligase
CMM_1346 ddlC; D-alanine-D-alanine ligase
CMM_0263 ddlA; putative D-alanine--D-alanine ligase
CMM_2573 alrA2; putative alanine racemase
CMM_2574 alrA1; putative alanine racemase
CMM_1863 murF; putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--
CMM_1862 mraY; putative phospho-N-acetylmuramoyl-pentapeptide-transferase
CMM_1859 murG; putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyr
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K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
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01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cmi01503]
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09176 Drug resistance: antineoplastic
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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01000 Enzymes [BR:cmi01000]
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01001 Protein kinases [BR:cmi01001]
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01009 Protein phosphatases and associated proteins [BR:cmi01009]
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01002 Peptidases and inhibitors [BR:cmi01002]
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01003 Glycosyltransferases [BR:cmi01003]
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01005 Lipopolysaccharide biosynthesis proteins [BR:cmi01005]
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01011 Peptidoglycan biosynthesis and degradation proteins [BR:cmi01011]
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CMM_1343 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
CMM_2791 murB; UDP-N-acetylenolpyruvoylglucosamine reductase (YP_061420.1| UDP-N-acetylmuramate dehydrogenase [Leifsonia xyli subsp. xyli str. CTCB07]; Q9L0L7|MURB_STRCO UDP-N-acetylenolpyruvoylglucosamine reductase). pfam01565, FAD_binding_4, FAD binding domain. pfam02873, MurB_C, UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain. InterPro: UDP-N-acetylenolpyruvoylglucosamine reductase.; High confidence in function and specificity
CMM_1858 murC; putative UDP-N-acetylmuramate--alanine ligase
CMM_1861 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
CMM_1864 murE; putative UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
CMM_2970 ddlB; putative D-alanine-D-alanine ligase
CMM_1346 ddlC; D-alanine-D-alanine ligase
CMM_0263 ddlA; putative D-alanine--D-alanine ligase
CMM_2573 alrA2; putative alanine racemase
CMM_2574 alrA1; putative alanine racemase
CMM_1294 murI; glutamate racemase (YP_062293.1| glutamate racemase [Leifsonia xyli subsp. xyli str. CTCB07]; ZP_00228323.1| COG0796: Glutamate racemase [Kineococcus radiotolerans SRS30216]). Provides the (R)-glutamate required for cell wall biosynthesis (By similarity). pfam01177,Asp_Glu_race, Asp/Glu/Hydantoin racemase. This family contains aspartate racemase, glutamate racemase, hydantoin racemase and arylmalonate decarboxylase. glut_race: glutamate racemase.; High confidence in function and specificity
CMM_1862 mraY; putative phospho-N-acetylmuramoyl-pentapeptide-transferase
CMM_1859 murG; putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyr
CMM_1695 bacA; undecaprenol kinase
CMM_2966 conserved membrane protein, MOP family
CMM_1865 ftsI; putative peptidoglycan glycosyltransferase/penicillin-binding protein
CMM_0017 pbpA; penicillin-binding protein
CMM_1708 pbpX; probable D-alanyl-D-alanine carboxypeptidase
CMM_2067 dacB; D-alanyl-D-alanine carboxypeptidase
CMM_0931 pbpE; D-alanyl-D-alanine carboxypeptidase
CMM_0840 NPL/P60 family secreted protein
pCM2_0016 conserved hypothetical protein
CMM_2467 putative secreted hydrolase
CMM_0013 putative sortase
CMM_1800 unnamed protein product; Function unclear; putative aminodeoxychorismate lyase (YP_055887.1| aminodeoxychorismate lyase [Propionibacterium acnes KPA171202]; NP_787502.1| hypothetical protein TWT374 [Tropheryma whipplei str. Twist]). pfam02618, ADC_lyase,Aminodeoxychorismate lyase. This family contains several aminodeoxychorismate lyase proteins. Aminodeoxychorismate lyase is a pyridoxal 5'-phosphate-dependent enzyme that converts 4-aminodeoxy-chorismate to pyruvate and p-aminobenzoate, a precursor of folic acid in bacteria
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K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01776 murI; glutamate racemase [EC:5.1.1.3]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K03980 murJ; putative peptidoglycan lipid II flippase
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K05364 pbpA; penicillin-binding protein A
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
K07284 srtA; sortase A [EC:3.4.22.70]
K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
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01004 Lipid biosynthesis proteins [BR:cmi01004]
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01008 Polyketide biosynthesis proteins [BR:cmi01008]
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01006 Prenyltransferases [BR:cmi01006]
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01007 Amino acid related enzymes [BR:cmi01007]
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00199 Cytochrome P450
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00194 Photosynthesis proteins [BR:cmi00194]
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09182 Protein families: genetic information processing
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Clavibacter michiganensis subsp. michiganensis