KEGG Orthology (KO) - Deferribacter desulfuricans

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
     03010 Ribosome [PATH:ddf03010]
     00970 Aminoacyl-tRNA biosynthesis [PATH:ddf00970]
       DEFDS_t12 trn_Ala1; tRNA-Ala
       DEFDS_t42 trn_Ala3; tRNA-Ala
       DEFDS_t39 trn_Ala2; tRNA-Ala
       DEFDS_t06 trn_Arg1; tRNA-Arg
       DEFDS_t25 trn_Arg4; tRNA-Arg
       DEFDS_t20 trn_Arg3; tRNA-Arg
       DEFDS_t10 trn_Arg2; tRNA-Arg
       DEFDS_t40 trn_Asn; tRNA-Asn
       DEFDS_t34 trn_Asp; tRNA-Asp
       DEFDS_t41 trn_Cys; tRNA-Cys
       DEFDS_t26 trn_Gln; tRNA-Gln
       DEFDS_t36 trn_Glu; tRNA-Glu
       DEFDS_t03 trn_Gly1; tRNA-Gly
       DEFDS_t09 trn_Gly2; tRNA-Gly
       DEFDS_t13 trn_Gly3; tRNA-Gly
       DEFDS_t31 trn_Gly4; tRNA-Gly
       DEFDS_t05 trn_His; tRNA-His
       DEFDS_t11 trn_Ile1; tRNA-Ile
       DEFDS_t43 trn_Ile2; tRNA-Ile
       DEFDS_t15 trn_Leu3; tRNA-Leu
       DEFDS_t08 trn_Leu2; tRNA-Leu
       DEFDS_t38 trn_Leu5; tRNA-Leu
       DEFDS_t04 trn_Leu1; tRNA-Leu
       DEFDS_t22 trn_Leu4; tRNA-Leu
       DEFDS_t37 trn_Lys; tRNA-Lys
       DEFDS_t01 trn_Met1; tRNA-Met
       DEFDS_t02 trn_Met2; tRNA-Met
       DEFDS_t27 trn_Met3; tRNA-Met
       DEFDS_t19 trn_Phe; tRNA-Phe
       DEFDS_t23 trn_Pro1; tRNA-Pro
       DEFDS_t24 trn_Pro2; tRNA-Pro
       DEFDS_t21 trn_Ser4; tRNA-Ser
       DEFDS_t17 trn_Ser2; tRNA-Ser
       DEFDS_t16 trn_Ser1; tRNA-Ser
       DEFDS_t18 trn_Ser3; tRNA-Ser
       DEFDS_t14 trn_Thr1; tRNA-Thr
       DEFDS_t33 trn_Thr3; tRNA-Thr
       DEFDS_t30 trn_Thr2; tRNA-Thr
       DEFDS_t29 trn_Trp; tRNA-Trp
       DEFDS_t32 trn_Tyr; tRNA-Tyr
       DEFDS_t35 trn_Val2; tRNA-Val
       DEFDS_t28 trn_Val1; tRNA-Val
       DEFDS_t07 trn_SeC; tRNA-Sec
       DEFDS_1071 glnS; glutamyl-tRNA synthetase
       DEFDS_1951 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
       DEFDS_1934 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B
       DEFDS_1950 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C
       DEFDS_1463 alaS; alanyl-tRNA synthetase
       DEFDS_1552 aspS; aspartyl-tRNA synthetase
       DEFDS_0639 glyQ; glycyl-tRNA synthetase, alpha subunit
       DEFDS_0236 glyS; glycyl-tRNA synthetase, beta subunit
       DEFDS_1504 thrS; threonyl-tRNA synthetase
       DEFDS_1957 serS; seryl-tRNA synthetase
       DEFDS_0273 selA; L-seryl-tRNA(Sec) selenium transferase
       DEFDS_0838 cysS; cysteinyl-tRNA synthetase
       DEFDS_0066 metG; methionyl-tRNA synthetase
       DEFDS_1994 fmt; methionyl-tRNA formyltransferase
       DEFDS_1129 conserved hypothetical protein
       DEFDS_0507 valS; valyl-tRNA synthetase
       DEFDS_0790 leuS; leucyl-tRNA synthetase
       DEFDS_1185 ileS; isoleucyl-tRNA synthetase
       DEFDS_1155 lysS; lysyl-tRNA synthetase
       DEFDS_1359 argS; arginyl-tRNA synthetase
       DEFDS_2069 proS; prolyl-tRNA synthetase
       DEFDS_1553 hisS; histidyl-tRNA synthetase
       DEFDS_1622 pheS; phenylalanyl-tRNA synthetase, alpha subunit
       DEFDS_1621 pheT; phenylalanyl-tRNA synthetase, beta subunit
       DEFDS_0113 tyrS; tyrosyl-tRNA synthetase
       DEFDS_1003 trpS; tryptophanyl-tRNA synthetase
K14218 tRNA-Ala; tRNA Ala
K14218 tRNA-Ala; tRNA Ala
K14218 tRNA-Ala; tRNA Ala
K14219 tRNA-Arg; tRNA Arg
K14219 tRNA-Arg; tRNA Arg
K14219 tRNA-Arg; tRNA Arg
K14219 tRNA-Arg; tRNA Arg
K14220 tRNA-Asn; tRNA Asn
K14221 tRNA-Asp; tRNA Asp
K14222 tRNA-Cys; tRNA Cys
K14223 tRNA-Gln; tRNA Gln
K14224 tRNA-Glu; tRNA Glu
K14225 tRNA-Gly; tRNA Gly
K14225 tRNA-Gly; tRNA Gly
K14225 tRNA-Gly; tRNA Gly
K14225 tRNA-Gly; tRNA Gly
K14226 tRNA-His; tRNA His
K14227 tRNA-Ile; tRNA Ile
K14227 tRNA-Ile; tRNA Ile
K14228 tRNA-Leu; tRNA Leu
K14228 tRNA-Leu; tRNA Leu
K14228 tRNA-Leu; tRNA Leu
K14228 tRNA-Leu; tRNA Leu
K14228 tRNA-Leu; tRNA Leu
K14229 tRNA-Lys; tRNA Lys
K14230 tRNA-Met; tRNA Met
K14230 tRNA-Met; tRNA Met
K14230 tRNA-Met; tRNA Met
K14231 tRNA-Phe; tRNA Phe
K14232 tRNA-Pro; tRNA Pro
K14232 tRNA-Pro; tRNA Pro
K14233 tRNA-Ser; tRNA Ser
K14233 tRNA-Ser; tRNA Ser
K14233 tRNA-Ser; tRNA Ser
K14233 tRNA-Ser; tRNA Ser
K14234 tRNA-Thr; tRNA Thr
K14234 tRNA-Thr; tRNA Thr
K14234 tRNA-Thr; tRNA Thr
K14235 tRNA-Trp; tRNA Trp
K14236 tRNA-Tyr; tRNA Tyr
K14237 tRNA-Val; tRNA Val
K14237 tRNA-Val; tRNA Val
K14238 tRNA-Sec; tRNA Sec
K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
     03013 Nucleocytoplasmic transport
     03015 mRNA surveillance pathway
     03008 Ribosome biogenesis in eukaryotes
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:ddf03000]
     03021 Transcription machinery [BR:ddf03021]
     03019 Messenger RNA biogenesis [BR:ddf03019]
     03041 Spliceosome
     03011 Ribosome [BR:ddf03011]
     03009 Ribosome biogenesis [BR:ddf03009]
     03016 Transfer RNA biogenesis [BR:ddf03016]
     03012 Translation factors [BR:ddf03012]
     03110 Chaperones and folding catalysts [BR:ddf03110]
     04131 Membrane trafficking [BR:ddf04131]
     04121 Ubiquitin system
     03051 Proteasome
     03032 DNA replication proteins [BR:ddf03032]
     03036 Chromosome and associated proteins [BR:ddf03036]
     03400 DNA repair and recombination proteins [BR:ddf03400]
     03029 Mitochondrial biogenesis [BR:ddf03029]
       DEFDS_1525 infB; translation initiation factor IF-2
       DEFDS_1503 infC; translation initiation factor IF-3
       DEFDS_0050 tsf; translation elongation factor Ts
       DEFDS_1774 translation elongation factor Tu
       DEFDS_1787 translation elongation factor Tu
       DEFDS_1534 translation elongation factor G
       DEFDS_1775 translation elongation factor G
       DEFDS_1082 era; GTP-binding protein Era
       DEFDS_0113 tyrS; tyrosyl-tRNA synthetase
       DEFDS_0790 leuS; leucyl-tRNA synthetase
       DEFDS_1552 aspS; aspartyl-tRNA synthetase
       DEFDS_1359 argS; arginyl-tRNA synthetase
       DEFDS_1951 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A
       DEFDS_1934 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B
       DEFDS_1950 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C
       DEFDS_0256 conserved hypothetical protein
       DEFDS_1988 ssb; single-strand DNA binding protein
       DEFDS_0017 hypothetical protein
       DEFDS_0104 conserved hypothetical protein
       DEFDS_2114 molecular chaperone DnaK
       DEFDS_1195 molecular chaperone DnaK
       DEFDS_2115 grpE; molecular chaperone GrpE
       DEFDS_0240 groEL; chaperonin GroEL
       DEFDS_0239 groES; chaperonin GroES
       DEFDS_2113 molecular chaperone DnaJ
       DEFDS_1927 molecular chaperone DnaJ
       DEFDS_2167 iscS; cysteine desulfurase
       DEFDS_1944 aminotransferase, class V
       DEFDS_1558 iscS; cysteine desulfurase
       DEFDS_1268 ATP-binding protein, CobQ/CobB/MinD/ParA family
       DEFDS_0349 preprotein translocase YidC subunit
K02519 infB; translation initiation factor IF-2
K02520 infC; translation initiation factor IF-3
K02357 tsf; elongation factor Ts
K02358 tuf; elongation factor Tu
K02358 tuf; elongation factor Tu
K02355 fusA; elongation factor G
K02355 fusA; elongation factor G
K03595 era; GTPase
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
K03111 ssb; single-strand DNA-binding protein
K07277 SAM50; outer membrane protein insertion porin family
K07277 SAM50; outer membrane protein insertion porin family
K04043 dnaK; molecular chaperone DnaK
K04043 dnaK; molecular chaperone DnaK
K03687 GRPE; molecular chaperone GrpE
K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
K04078 groES; chaperonin GroES
K03686 dnaJ; molecular chaperone DnaJ
K03686 dnaJ; molecular chaperone DnaJ
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K03593 mrp; ATP-binding protein involved in chromosome partitioning
K03217 yidC; YidC/Oxa1 family membrane protein insertase
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 23, 2024