Transfer RNA Biogenesis - Delftia sp. HK171

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 Eukaryotic type
   5'processing factors
   3'processing and CCA adding factors
   tRNA spricing factors
   tRNA transport factors
   Aminoacyl-tRNA synthetases (AARSs)
   tRNA modification factors
     Deaminases
     Dihydorouridine synthases
     Methylthiotransferase
     Methyltransferases
     Psudouridine synthases
     Thiolation factors
     KEOPS/EKC complex
     Elongator complex
     Elongator related proteins
     Other tRNA modification factors
       BO996_05015 threonylcarbamoyl-AMP synthase
       BO996_23760 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
       BO996_03010 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
       BO996_02765 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
       BO996_00515 tRNA guanosine(34) transglycosylase Tgt
       BO996_15715 selenide
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] 
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] 
K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] 
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme 
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] 
K01008 selD; selenide, water dikinase [EC:2.7.9.3] 
   tRNA degradation factors
 
 Prokaryotic type
   5'processing factors
   3'processing and CCA adding factors
   tRNA spricing factors
   tRNA transport factors
   Aminoacyl-tRNA synthetases (AARSs)
   tRNA modification factors
     Deaminases
     Dihydorouridine synthases
     Methylthiotransferases
     Methyltransferases
     Psudouridine synthases
     Thiolation factors
     KEOPS/EKC complex
     Other tRNA modification factors
       BO996_02765 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
       BO996_23760 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
       BO996_21095 FAD-dependent cmnm(5)s(2)U34 oxidoreductase
       BO996_05130 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
       BO996_06410 7-cyano-7-deazaguanine synthase QueC
       BO996_08690 6-carboxytetrahydropterin synthase QueD
       BO996_08695 7-carboxy-7-deazaguanine synthase
       BO996_24430 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
       BO996_23635 tRNA epoxyqueuosine(34) reductase QueG
       BO996_15715 selenide
       BO996_16640 tRNA 2-selenouridine(34) synthase MnmH
       BO996_00515 tRNA guanosine(34) transglycosylase Tgt
       BO996_11750 tRNA lysidine(34) synthetase TilS
       BO996_04960 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
       BO996_05015 threonylcarbamoyl-AMP synthase
       BO996_23640 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
       BO996_15580 tRNA threonylcarbamoyladenosine dehydratase
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme 
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] 
K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] 
K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] 
K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] 
K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] 
K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] 
K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] 
K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] 
K01008 selD; selenide, water dikinase [EC:2.7.9.3] 
K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] 
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] 
K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] 
K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB 
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] 
K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE 
K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase 
   tRNA degradation factors

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Last updated: July 17, 2020