| |
KO |
 Eukaryotic type
|
 mRNA processing factors
|
mRNA surveillance and transport factors
|
Transport factors
|
EJC complex
|
TREX complex
|
TREX-2 complex
|
Nuclear pore complex
|
Ran-mediated transport factors
|
eIF4F and regulatory proteins
|
 111179092 EIF4E; eukaryotic translation initiation factor 4E isoform X2
111171941 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1
111169858 EIF4E1B; eukaryotic translation initiation factor 4E type 1B
111185792 EIF4A1; eukaryotic initiation factor 4A-I isoform X1
111172841 EIF4A2; eukaryotic initiation factor 4A-II isoform X1
111173165 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 isoform X1
111165263 EIF4G2; eukaryotic translation initiation factor 4 gamma 2
111163226 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 isoform X1
111173962 EIF4B; eukaryotic translation initiation factor 4B isoform X1
111182051 EIF4H; eukaryotic translation initiation factor 4H isoform X1
111173509 EIF4EBP1; eukaryotic translation initiation factor 4E-binding protein 1
111183472 EIF4EBP2; eukaryotic translation initiation factor 4E-binding protein 2
111162842 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X1
111184689 ANGEL2; protein angel homolog 2 isoform X1
111176224 ANGEL1; protein angel homolog 1 isoform X1
111173611 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1
111167825 FMR1; synaptic functional regulator FMR1 isoform X1
111185681 FXR2; fragile X mental retardation syndrome-related protein 2
111183155 CYFIP2; cytoplasmic FMR1-interacting protein 2 isoform X1
111183320 CYFIP1; cytoplasmic FMR1-interacting protein 1
111183137 GEMIN5; gem-associated protein 5 isoform X1
111164846 TACC3; transforming acidic coiled-coil-containing protein 3 isoform X1
111171436 CPEB2; cytoplasmic polyadenylation element-binding protein 2 isoform X2
111172494 CPEB3; cytoplasmic polyadenylation element-binding protein 3 isoform X1
111185464 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1
111164690 CPEB1; cytoplasmic polyadenylation element-binding protein 1
111165537 DDX3X; ATP-dependent RNA helicase DDX3X isoform X1
111181976 GIGYF1; GRB10-interacting GYF protein 1 isoform X1
111171943 GIGYF2; GRB10-interacting GYF protein 2 isoform X1
111165903 PABPC4L; polyadenylate-binding protein 4-like
111169266 LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like
111178167 PABPC5; polyadenylate-binding protein 5
111171014 polyadenylate-binding protein 1-like 2
111175629 PABPC4; polyadenylate-binding protein 4 isoform X1
111184143 polyadenylate-binding protein 1-like
111184272 polyadenylate-binding protein 1-like
111180377 PABPC1; polyadenylate-binding protein 1
111186899 PAIP1; polyadenylate-binding protein-interacting protein 1 isoform X1
111182511 PAIP2; polyadenylate-binding protein-interacting protein 2
111167931 PAIP2B; polyadenylate-binding protein-interacting protein 2B
111170702 SKIV2L; helicase SKI2W
111170289 DEAF1; deformed epidermal autoregulatory factor 1 homolog isoform X1
111168237 MCTS1; malignant T-cell-amplified sequence 1
111170120 malignant T-cell-amplified sequence 1-like
111186943 DENR; density-regulated protein
|
K03259 EIF4E; translation initiation factor 4E
K03259 EIF4E; translation initiation factor 4E
K03259 EIF4E; translation initiation factor 4E
K03257 EIF4A; translation initiation factor 4A
K03257 EIF4A; translation initiation factor 4A
K03260 EIF4G; translation initiation factor 4G
K03260 EIF4G; translation initiation factor 4G
K03260 EIF4G; translation initiation factor 4G
K03258 EIF4B; translation initiation factor 4B
K24086 EIF4H; translation initiation factor 4H
K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1
K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
K18729 ANGEL; protein angel
K18729 ANGEL; protein angel
K15516 FMR; fragile X mental retardation protein
K15516 FMR; fragile X mental retardation protein
K15516 FMR; fragile X mental retardation protein
K05749 CYFIP; cytoplasmic FMR1 interacting protein
K05749 CYFIP; cytoplasmic FMR1 interacting protein
K13133 GEMIN5; gem associated protein 5
K14283 TACC3; transforming acidic coiled-coil-containing protein 3
K02602 CPEB; cytoplasmic polyadenylation element-binding protein
K02602 CPEB; cytoplasmic polyadenylation element-binding protein
K02602 CPEB; cytoplasmic polyadenylation element-binding protein
K02602 CPEB; cytoplasmic polyadenylation element-binding protein
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
K13126 PABPC; polyadenylate-binding protein
K13126 PABPC; polyadenylate-binding protein
K13126 PABPC; polyadenylate-binding protein
K13126 PABPC; polyadenylate-binding protein
K13126 PABPC; polyadenylate-binding protein
K13126 PABPC; polyadenylate-binding protein
K13126 PABPC; polyadenylate-binding protein
K13126 PABPC; polyadenylate-binding protein
K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
K12599 SKI2; antiviral helicase SKI2 [EC:3.6.4.13]
K23041 DEAF1; deformed epidermal autoregulatory factor 1
K07575 MCTS; malignant T-cell-amplified sequence
K07575 MCTS; malignant T-cell-amplified sequence
K24272 DENR; density-regulated protein
|
APOBEC1-ACF complex
|
Other transport factors
|
Surveillance factors
|
Factors involved in mRNA localization
|
mRNA cycle factors
|
Common to processing body (P body) and stress granule
|
111179267 XRN1; 5'-3' exoribonuclease 1 isoform X1
111165164 AGO2; protein argonaute-2 isoform X1
111175573 AGO3; protein argonaute-3 isoform X1
111175575 AGO1; protein argonaute-1 isoform X2
111175572 protein argonaute-4
111179092 EIF4E; eukaryotic translation initiation factor 4E isoform X2
111171941 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1
111169858 EIF4E1B; eukaryotic translation initiation factor 4E type 1B
111166517 UPF1; regulator of nonsense transcripts 1 isoform X1
111165537 DDX3X; ATP-dependent RNA helicase DDX3X isoform X1
111166863 DDX6; probable ATP-dependent RNA helicase DDX6
111170503 MEX3D; RNA-binding protein MEX3D
111167047 MEX3A; RNA-binding protein MEX3A
111180250 MEX3C; RNA-binding E3 ubiquitin-protein ligase MEX3C
111164733 MEX3B; RNA-binding protein MEX3B
111176805 FASTK; fas-activated serine/threonine kinase isoform X1
111180922 LSM14A; protein LSM14 homolog A isoform X1
111186694 LSM14B; protein LSM14 homolog B isoform X1
111167943 PCBP1; poly(rC)-binding protein 1
111173937 PCBP2; poly(rC)-binding protein 2 isoform X1
111175680 YBX1; nuclease-sensitive element-binding protein 1
111164207 AJUBA; LIM domain-containing protein ajuba isoform X1
111174488 LIMD1; LIM domain-containing protein 1
111180915 WTIP; Wilms tumor protein 1-interacting protein isoform X1
111176731 APOBEC1; C->U-editing enzyme APOBEC-1 isoform X1
111186177 DNA dC->dU-editing enzyme APOBEC-3B-like isoform X1
111186179 DNA dC->dU-editing enzyme APOBEC-3G-like
111180021 MOV10; helicase MOV-10 isoform X1
111163458 PNRC2; proline-rich nuclear receptor coactivator 2
111185624 TNPO1; transportin-1 isoform X1
111163541 SMG1; serine/threonine-protein kinase SMG1 isoform X1
111167119 SMG5; protein SMG5 isoform X1
111185864 SMG6; telomerase-binding protein EST1A isoform X1
111184638 SMG7; protein SMG7 isoform X1
111180869 ZFP36; mRNA decay activator protein ZFP36
111173032 ZFP36L1; mRNA decay activator protein ZFP36L1
111174824 ZFP36L2; mRNA decay activator protein ZFP36L2
111168792 LIN28B; protein lin-28 homolog B isoform X1
111163253 LIN28A; protein lin-28 homolog A
111164902 HTT; huntingtin isoform X2
111176883 IPO8; importin-8 isoform X1
111167593 BICC1; protein bicaudal C homolog 1 isoform X1
111180388 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
111168823 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
111171984 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
111173921 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 isoform X1
111179872 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
111172906 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X1
111171157 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
111180501 heterogeneous nuclear ribonucleoprotein A1-like
111172639 heterogeneous nuclear ribonucleoprotein A1-like
111172644 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
111168125 heterogeneous nuclear ribonucleoprotein A3-like isoform X1
111179862 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
111177699 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
111187903 heterogeneous nuclear ribonucleoprotein A1-like
111162914 heterogeneous nuclear ribonucleoprotein A1-like
111165679 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
111165695 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
111165023 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
111172504 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
111178380 PRKACB; cAMP-dependent protein kinase catalytic subunit beta isoform X1
111166674 PRKACA; cAMP-dependent protein kinase catalytic subunit alpha
111183138 LARP1; la-related protein 1
111165883 LARP1B; la-related protein 1B isoform X1
111186871 ATXN2; ataxin-2 isoform X2
111182193 ATXN2L; ataxin-2-like protein isoform X1
|
K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
K11593 ELF2C; eukaryotic translation initiation factor 2C
K11593 ELF2C; eukaryotic translation initiation factor 2C
K11593 ELF2C; eukaryotic translation initiation factor 2C
K11593 ELF2C; eukaryotic translation initiation factor 2C
K03259 EIF4E; translation initiation factor 4E
K03259 EIF4E; translation initiation factor 4E
K03259 EIF4E; translation initiation factor 4E
K14326 UPF1; regulator of nonsense transcripts 1 [EC:3.6.4.13 5.6.2.3]
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
K18749 LSM14; protein LSM14
K18749 LSM14; protein LSM14
K12889 PCBP1; poly(rC)-binding protein 1
K13162 PCBP2; poly(rC)-binding protein 2
K09276 YBX1; Y-box-binding protein 1
K16682 AJUBA; LIM domain-containing protein
K16682 AJUBA; LIM domain-containing protein
K16682 AJUBA; LIM domain-containing protein
K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
K18422 MOV10; helicase MOV-10 [EC:3.6.4.13]
K18751 PNRC2; proline-rich nuclear receptor coactivator 2
K18752 TNPO1; transportin-1
K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
K11125 SMG5; protein SMG5
K11124 SMG6; protein SMG6 [EC:3.1.-.-]
K14409 SMG7; protein SMG7
K15308 TTP; tristetraprolin
K18753 ZFP36L; butyrate response factor
K18753 ZFP36L; butyrate response factor
K18754 LIN28; protein lin-28
K18754 LIN28; protein lin-28
K04533 HD; huntingtin
K18755 IPO8; importin-8
K18756 BICC1; protein bicaudal C
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
K04345 PKA; protein kinase A [EC:2.7.11.11]
K04345 PKA; protein kinase A [EC:2.7.11.11]
K18757 LARP1; la-related protein 1
K18757 LARP1; la-related protein 1
K23625 ATXN2_2L; ataxin 2/2L
K23625 ATXN2_2L; ataxin 2/2L
|
P-body specific factors
|
Stress granule specific factors
|
mRNA degradation factors
|
|
|
Prokaryotic type
|
Messenger RNA Biogenesis - Delphinapterus leucas (beluga whale)