KEGG Orthology (KO) - Eggerthella lenta

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:ele03030]
     03410 Base excision repair [PATH:ele03410]
     03420 Nucleotide excision repair [PATH:ele03420]
     03430 Mismatch repair [PATH:ele03430]
     03440 Homologous recombination [PATH:ele03440]
     03450 Non-homologous end-joining [PATH:ele03450]
       Elen_1599 Ku protein
       Elen_1951 DNA ligase D
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
     03460 Fanconi anemia pathway
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:ele03000]
     03021 Transcription machinery [BR:ele03021]
     03019 Messenger RNA biogenesis [BR:ele03019]
     03041 Spliceosome
     03011 Ribosome [BR:ele03011]
     03009 Ribosome biogenesis [BR:ele03009]
     03016 Transfer RNA biogenesis [BR:ele03016]
     03012 Translation factors [BR:ele03012]
     03110 Chaperones and folding catalysts [BR:ele03110]
     04131 Membrane trafficking [BR:ele04131]
     04121 Ubiquitin system [BR:ele04121]
     03051 Proteasome [BR:ele03051]
     03032 DNA replication proteins [BR:ele03032]
     03036 Chromosome and associated proteins [BR:ele03036]
     03400 DNA repair and recombination proteins [BR:ele03400]
       Elen_1341 methylated-DNA/protein-cysteinemethyltransferase
       Elen_2401 methylated-DNA/protein-cysteinemethyltransferase
       Elen_1271 HhH-GPD family protein
       Elen_1289 endonuclease III
       Elen_1607 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
       Elen_2784 phage SPO1 DNA polymerase-related protein
       Elen_0534 HhH-GPD family protein
       Elen_1473 DNA-3-methyladenine glycosylase I
       Elen_0120 exodeoxyribonuclease III Xth
       Elen_2483 apurinic endonuclease Apn1
       Elen_2721 single-stranded-DNA-specific exonuclease RecJ
       Elen_2205 DNA ligase, NAD-dependent
       Elen_2014 DNA polymerase I
       Elen_1467 ABC transporter related
       Elen_1422 excinuclease ABC, A subunit
       Elen_2516 excinuclease ABC, B subunit
       Elen_1784 excinuclease ABC, C subunit
       Elen_0950 UvrD/REP helicase
       Elen_1786 UvrD/REP helicase
       Elen_2835 Superfamily I DNA and RNA helicase-like protein
       Elen_0714 DNA-directed RNA polymerase, beta subunit
       Elen_0715 DNA-directed RNA polymerase, beta' subunit
       Elen_2804 DNA-directed RNA polymerase, alpha subunit
       Elen_1659 DNA-directed RNA polymerase, omega subunit
       Elen_1292 transcription-repair coupling factor
       Elen_1732 exodeoxyribonuclease VII, large subunit
       Elen_1731 Exonuclease VII small subunit
       Elen_2538 Exonuclease VII small subunit
       Elen_1050 DNA polymerase III, alpha subunit
       Elen_0003 DNA polymerase III, beta subunit
       Elen_1655 DNA polymerase III, delta subunit
       Elen_1146 DNA polymerase III, delta prime subunit
       Elen_1633 Exonuclease RNase T and DNA polymerase III
       Elen_0603 DNA polymerase III, subunits gamma and tau
       Elen_0830 single-strand binding protein
       Elen_0023 single-strand binding protein
       Elen_2604 single-strand binding protein
       Elen_2144 DNA mismatch endonuclease Vsr
       Elen_1619 recA protein
       Elen_0973 Holliday junction DNA helicase RuvA
       Elen_0974 Holliday junction DNA helicase RuvB
       Elen_0972 crossover junction endodeoxyribonuclease RuvC
       Elen_1308 primosomal protein N'
       Elen_0803 single-strand binding protein/Primosomal replication protein n
       Elen_0027 metallophosphoesterase
       Elen_0004 DNA replication and repair protein RecF
       Elen_1354 helicase domain protein
       Elen_2841 putative transcriptional regulator
       Elen_0061 putative transcriptional regulator
       Elen_1638 DNA repair protein RecO
       Elen_0605 recombination protein RecR
       Elen_2491 DNA repair protein RecN
       Elen_1974 CRISPR-associated protein Cas1
       Elen_1599 Ku protein
       Elen_1951 DNA ligase D
       Elen_0007 DNA gyrase, A subunit
       Elen_0006 DNA gyrase, B subunit
       Elen_1139 DNA topoisomerase type IA central domain protein
       Elen_1066 ATP-dependent DNA helicase RecQ
       Elen_1555 DNA-directed DNA polymerase
       Elen_1177 DNA-directed DNA polymerase
       Elen_1465 UMUC domain protein DNA-repair protein
       Elen_1611 SOS-response transcriptional repressor, LexA
       Elen_1618 regulatory protein RecX
       Elen_3112 DNA polymerase III, epsilon subunit
       Elen_2140 DEAD/H associated domain protein
       Elen_2289 ribonucleoside-diphosphate reductase, alpha subunit
       Elen_2288 Ribonucleoside-diphosphate reductase
       Elen_1808 phosphoesterase RecJ domain protein
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K03547 sbcD; DNA repair protein SbcD/Mre11
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
     03029 Mitochondrial biogenesis [BR:ele03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 24, 2024