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KO |
09100 Metabolism
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09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:ele03030]
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03410 Base excision repair [PATH:ele03410]
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03420 Nucleotide excision repair [PATH:ele03420]
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03430 Mismatch repair [PATH:ele03430]
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03440 Homologous recombination [PATH:ele03440]
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03450 Non-homologous end-joining [PATH:ele03450]
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Elen_1599 Ku protein
Elen_1951 DNA ligase D
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K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:ele03000]
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03021 Transcription machinery [BR:ele03021]
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03019 Messenger RNA biogenesis [BR:ele03019]
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03041 Spliceosome
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03011 Ribosome [BR:ele03011]
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03009 Ribosome biogenesis [BR:ele03009]
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03016 Transfer RNA biogenesis [BR:ele03016]
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03012 Translation factors [BR:ele03012]
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03110 Chaperones and folding catalysts [BR:ele03110]
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04131 Membrane trafficking [BR:ele04131]
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04121 Ubiquitin system [BR:ele04121]
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03051 Proteasome [BR:ele03051]
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03032 DNA replication proteins [BR:ele03032]
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03036 Chromosome and associated proteins [BR:ele03036]
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03400 DNA repair and recombination proteins [BR:ele03400]
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Elen_1341 methylated-DNA/protein-cysteinemethyltransferase
Elen_2401 methylated-DNA/protein-cysteinemethyltransferase
Elen_1271 HhH-GPD family protein
Elen_1289 endonuclease III
Elen_1607 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Elen_2784 phage SPO1 DNA polymerase-related protein
Elen_0534 HhH-GPD family protein
Elen_1473 DNA-3-methyladenine glycosylase I
Elen_0120 exodeoxyribonuclease III Xth
Elen_2483 apurinic endonuclease Apn1
Elen_2721 single-stranded-DNA-specific exonuclease RecJ
Elen_2205 DNA ligase, NAD-dependent
Elen_2014 DNA polymerase I
Elen_1467 ABC transporter related
Elen_1422 excinuclease ABC, A subunit
Elen_2516 excinuclease ABC, B subunit
Elen_1784 excinuclease ABC, C subunit
Elen_0950 UvrD/REP helicase
Elen_1786 UvrD/REP helicase
Elen_2835 Superfamily I DNA and RNA helicase-like protein
Elen_0714 DNA-directed RNA polymerase, beta subunit
Elen_0715 DNA-directed RNA polymerase, beta' subunit
Elen_2804 DNA-directed RNA polymerase, alpha subunit
Elen_1659 DNA-directed RNA polymerase, omega subunit
Elen_1292 transcription-repair coupling factor
Elen_1732 exodeoxyribonuclease VII, large subunit
Elen_1731 Exonuclease VII small subunit
Elen_2538 Exonuclease VII small subunit
Elen_1050 DNA polymerase III, alpha subunit
Elen_0003 DNA polymerase III, beta subunit
Elen_1655 DNA polymerase III, delta subunit
Elen_1146 DNA polymerase III, delta prime subunit
Elen_1633 Exonuclease RNase T and DNA polymerase III
Elen_0603 DNA polymerase III, subunits gamma and tau
Elen_0830 single-strand binding protein
Elen_0023 single-strand binding protein
Elen_2604 single-strand binding protein
Elen_2144 DNA mismatch endonuclease Vsr
Elen_1619 recA protein
Elen_0973 Holliday junction DNA helicase RuvA
Elen_0974 Holliday junction DNA helicase RuvB
Elen_0972 crossover junction endodeoxyribonuclease RuvC
Elen_1308 primosomal protein N'
Elen_0803 single-strand binding protein/Primosomal replication protein n
Elen_0027 metallophosphoesterase
Elen_0004 DNA replication and repair protein RecF
Elen_1354 helicase domain protein
Elen_2841 putative transcriptional regulator
Elen_0061 putative transcriptional regulator
Elen_1638 DNA repair protein RecO
Elen_0605 recombination protein RecR
Elen_2491 DNA repair protein RecN
Elen_1974 CRISPR-associated protein Cas1
Elen_1599 Ku protein
Elen_1951 DNA ligase D
Elen_0007 DNA gyrase, A subunit
Elen_0006 DNA gyrase, B subunit
Elen_1139 DNA topoisomerase type IA central domain protein
Elen_1066 ATP-dependent DNA helicase RecQ
Elen_1555 DNA-directed DNA polymerase
Elen_1177 DNA-directed DNA polymerase
Elen_1465 UMUC domain protein DNA-repair protein
Elen_1611 SOS-response transcriptional repressor, LexA
Elen_1618 regulatory protein RecX
Elen_3112 DNA polymerase III, epsilon subunit
Elen_2140 DEAD/H associated domain protein
Elen_2289 ribonucleoside-diphosphate reductase, alpha subunit
Elen_2288 Ribonucleoside-diphosphate reductase
Elen_1808 phosphoesterase RecJ domain protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K03547 sbcD; DNA repair protein SbcD/Mre11
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:ele03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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