DNA Repair and Recombination Proteins - Esox lucius (northern pike)

[ Brite menu | Download htext | Download json | Help ]
Search

1st Level  2nd Level  3rd Level  4th Level  5th Level  6th Level 

     KO
 Eukaryotic type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
       DNA glycosylases
       AP endonucleases
       Long Patch-BER factors
         DNA polymerase delta complex
         DNA polymerase epsilon complex
         105014323 pcna; proliferating cell nuclear antigen
K04802 PCNA; proliferating cell nuclear antigen 
         105019536 fen1; flap endonuclease 1
K04799 FEN1; flap endonuclease-1 [EC:3.-.-.-] 
         105024554 lig1; DNA ligase 1
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
       Short Patch-BER factors
       Other BER factors
     NER (nucleotide excision repair)
       GGR (global genome repair) factors
       TCR (transcription coupled repair) factors
       TFIIH complex
       RPA (replication factor A)
       Other NER factors
         105021082 DNA repair protein complementing XP-A cells homolog isoform X1
         105022897 xpa; DNA repair protein complementing XP-A cells
         105029812 ercc1; DNA excision repair protein ERCC-1
         105031067 ercc4; DNA repair endonuclease XPF isoform X1
         105020107 ercc5; DNA repair protein complementing XP-G cells
         105024554 lig1; DNA ligase 1
         105006528 mms19; MMS19 nucleotide excision repair protein homolog
         105011392 cullin-3 isoform X1
         105024564 cullin-3
         105010654 cullin-5
         105011055 cullin-5 isoform X1
         105019655 eloc; transcription elongation factor B polypeptide 1
         105012960 elongin-B isoform X1
         105030139 elongin-B
         105027917 eloa; elongin-A
         105021357 elongin-A isoform X1
K10847 XPA; DNA-repair protein complementing XP-A cells 
K10847 XPA; DNA-repair protein complementing XP-A cells 
K10849 ERCC1; DNA excision repair protein ERCC-1 
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] 
K10846 ERCC5; DNA excision repair protein ERCC-5 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
K15075 MET18; DNA repair/transcription protein MET18/MMS19 
K03869 CUL3; cullin 3 
K03869 CUL3; cullin 3 
K10612 CUL5; cullin 5 
K10612 CUL5; cullin 5 
K03872 ELOC; elongin-C 
K03873 ELOB; elongin-B 
K03873 ELOB; elongin-B 
K15076 ELOA; elongin-A 
K15076 ELOA; elongin-A 
     MMR (mismatch excision repair)
       Mismatch and loop recognition factors
       MutS homologs specialized for meiosis
       MutL homologs
       DNA polymerase delta complex
       RPA (replication factor A)
       RFC (replication factor C)
       Other MMR factors
         105014323 pcna; proliferating cell nuclear antigen
         105023232 exo1; exonuclease 1 isoform X3
         105030409 high mobility group-T protein
         105030464 high mobility group-T protein isoform X1
         105024554 lig1; DNA ligase 1
K04802 PCNA; proliferating cell nuclear antigen 
K10746 EXO1; exonuclease 1 [EC:3.1.-.-] 
K10802 HMGB1; high mobility group protein B1 
K10802 HMGB1; high mobility group protein B1 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Check point factors
   Other factors with a suspected DNA repair function
 
 Prokaryotic type

[ BRITE | KEGG2 | KEGG ]
Last updated: July 6, 2020