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KO |
09100 Metabolism
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09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:eyy03030]
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03410 Base excision repair [PATH:eyy03410]
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03420 Nucleotide excision repair [PATH:eyy03420]
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03430 Mismatch repair [PATH:eyy03430]
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03440 Homologous recombination [PATH:eyy03440]
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03450 Non-homologous end-joining [PATH:eyy03450]
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EGYY_13950 uncharacterized ACR
EGYY_19050 hypothetical protein
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K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:eyy03000]
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03021 Transcription machinery [BR:eyy03021]
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03019 Messenger RNA biogenesis [BR:eyy03019]
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03041 Spliceosome
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03011 Ribosome [BR:eyy03011]
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03009 Ribosome biogenesis [BR:eyy03009]
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03016 Transfer RNA biogenesis [BR:eyy03016]
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03012 Translation factors [BR:eyy03012]
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03110 Chaperones and folding catalysts [BR:eyy03110]
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04131 Membrane trafficking [BR:eyy04131]
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04121 Ubiquitin system
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03051 Proteasome [BR:eyy03051]
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03032 DNA replication proteins [BR:eyy03032]
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03036 Chromosome and associated proteins [BR:eyy03036]
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03400 DNA repair and recombination proteins [BR:eyy03400]
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EGYY_17560 Ada; methylated DNA-protein cysteine methyltransferase
EGYY_12300 MutY; A/G-specific DNA glycosylase
EGYY_12420 Nth; predicted EndoIII protein
EGYY_14020 hypothetical protein
EGYY_26040 uracil-DNA glycosylase
EGYY_16140 hypothetical protein
EGYY_27130 hypothetical protein
EGYY_06640 Nfo; endonuclease IV
EGYY_25950 RecJ; single-stranded DNA-specific exonuclease
EGYY_21750 hypothetical protein
EGYY_19930 hypothetical protein
EGYY_16250 UvrA; excinuclease ATPase subunit
EGYY_16710 UvrA; excinuclease ATPase subunit
EGYY_06000 UvrB; helicase subunit of the DNA excision repair complex
EGYY_12860 hypothetical protein
EGYY_24620 UvrD; superfamily I DNA helicase
EGYY_25840 UvrD; superfamily I DNA helicase
EGYY_07360 RpoB; DNA-directed RNA polymerase beta subunit
EGYY_07370 RpoC; DNA-directed RNA polymerase beta' subunit
EGYY_26190 hypothetical protein
EGYY_14510 RpoZ; DNA-directed RNA polymerase subunit K/omega
EGYY_12430 Mfd; transcription-repair coupling factor
EGYY_13110 hypothetical protein
EGYY_13120 XseB; exonuclease VII small subunit
EGYY_05910 hypothetical protein
EGYY_20940 hypothetical protein
EGYY_00020 hypothetical protein
EGYY_14470 hypothetical protein
EGYY_10890 DnaX; DNA polymerase III
EGYY_08140 DnaX; DNA polymerase III
EGYY_00970 Ssb; single-stranded DNA-binding protein
EGYY_14130 hypothetical protein
EGYY_21540 RuvA; holliday junction resolvasome DNA-binding subunit
EGYY_21530 hypothetical protein
EGYY_21550 RuvC; holliday junction resolvasome endonuclease subunit
EGYY_12570 hypothetical protein
EGYY_01010 hypothetical protein
EGYY_00030 hypothetical protein
EGYY_05410 hypothetical protein
EGYY_17470 RecG; RecG-like helicase
EGYY_23270 hypothetical protein
EGYY_23110 hypothetical protein
EGYY_14270 RecO; recombinational DNA repair protein
EGYY_08160 RecR; recombinational DNA repair protein
EGYY_06510 RecN; ATPase involved in DNA repair
EGYY_25770 uncharacterized ACR
EGYY_13950 uncharacterized ACR
EGYY_19050 hypothetical protein
EGYY_00060 hypothetical protein
EGYY_00050 hypothetical protein
EGYY_10740 hypothetical protein
EGYY_20410 hypothetical protein
EGYY_14830 hypothetical protein
EGYY_16300 hypothetical protein
EGYY_14050 LexA; SOS-response transcriptional repressor
EGYY_14120 OraA; uncharacterized BCR
EGYY_29890 hypothetical protein
EGYY_12700 exopolyphosphatase-related protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03547 sbcD; DNA repair protein SbcD/Mre11
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:eyy03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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