KEGG Orthology (KO) - Flavobacterium kingsejongi

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:fki03030]
     03410 Base excision repair [PATH:fki03410]
     03420 Nucleotide excision repair [PATH:fki03420]
     03430 Mismatch repair [PATH:fki03430]
     03440 Homologous recombination [PATH:fki03440]
     03450 Non-homologous end-joining [PATH:fki03450]
       FK004_15150 Ku protein
       FK004_15155 DNA ligase D
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
     03460 Fanconi anemia pathway
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:fki03000]
     03021 Transcription machinery [BR:fki03021]
     03019 Messenger RNA biogenesis [BR:fki03019]
     03041 Spliceosome
     03011 Ribosome [BR:fki03011]
     03009 Ribosome biogenesis [BR:fki03009]
     03016 Transfer RNA biogenesis [BR:fki03016]
     03012 Translation factors [BR:fki03012]
     03110 Chaperones and folding catalysts [BR:fki03110]
     04131 Membrane trafficking [BR:fki04131]
     04121 Ubiquitin system
     03051 Proteasome [BR:fki03051]
     03032 DNA replication proteins [BR:fki03032]
     03036 Chromosome and associated proteins [BR:fki03036]
     03400 DNA repair and recombination proteins [BR:fki03400]
       FK004_04940 cysteine methyltransferase
       FK004_16065 deoxyribodipyrimidine photolyase
       FK004_14830 uracil-DNA glycosylase
       FK004_02240 A/G-specific adenine glycosylase
       FK004_11265 DNA lyase
       FK004_16445 endonuclease III
       FK004_01365 ATP-dependent DNA ligase
       FK004_17415 NUDIX hydrolase
       FK004_13095 NUDIX hydrolase
       FK004_12415 NUDIX hydrolase
       FK004_04810 deoxyuridine 5'-triphosphate nucleotidohydrolase
       FK004_15675 hypothetical protein
       FK004_01940 DNA-3-methyladenine glycosylase
       FK004_17750 endonuclease
       FK004_05845 exodeoxyribonuclease III
       FK004_13125 endonuclease V
       FK004_02620 single-stranded-DNA-specific exonuclease RecJ
       FK004_15940 DNA ligase (NAD(+)) LigA
       FK004_01895 DNA polymerase I
       FK004_18160 excinuclease ABC subunit A
       FK004_14280 excinuclease ABC subunit A
       FK004_16455 excinuclease ABC subunit A
       FK004_10745 excinuclease ABC subunit B
       FK004_03555 excinuclease ABC subunit C
       FK004_14075 ATP-dependent DNA helicase
       FK004_00105 DNA-directed RNA polymerase subunit beta
       FK004_00100 DNA-directed RNA polymerase subunit beta'
       FK004_08845 DNA-directed RNA polymerase subunit alpha
       FK004_17805 DNA primase
       FK004_05205 transcription-repair coupling factor
       FK004_01475 DNA mismatch repair protein MutS
       FK004_14835 DNA mismatch repair protein MutS
       FK004_09580 DNA mismatch repair protein MutL
       FK004_07070 DNA polymerase III subunit alpha
       FK004_10025 DNA polymerase III subunit beta
       FK004_13635 DNA polymerase III subunit delta
       FK004_04400 DNA polymerase III subunit delta'
       FK004_17375 DNA polymerase III subunit epsilon
       FK004_00215 DNA polymerase III subunit epsilon
       FK004_14600 hypothetical protein
       FK004_16235 exonuclease
       FK004_13400 DNA polymerase III subunit gamma/tau
       FK004_02230 single-stranded DNA-binding protein
       FK004_05155 single-stranded DNA-binding protein
       FK004_00985 single-stranded DNA-binding protein
       FK004_04900 recombinase RecA
       FK004_01735 Holliday junction branch migration protein RuvA
       FK004_01750 Holliday junction branch migration DNA helicase RuvB
       FK004_07120 crossover junction endodeoxyribonuclease RuvC
       FK004_15970 primosomal protein N'
       FK004_05865 DNA repair protein RadA
       FK004_09565 DNA replication and repair protein RecF
       FK004_14045 ATP-dependent DNA helicase RecG
       FK004_08930 recombination protein RecR
       FK004_15890 DNA repair protein RecN
       FK004_15150 Ku protein
       FK004_15155 DNA ligase D
       FK004_14490 DNA gyrase subunit A
       FK004_17120 DNA topoisomerase (ATP-hydrolyzing) subunit B
       FK004_02795 DNA topoisomerase I
       FK004_00605 DNA topoisomerase I
       FK004_02245 integration host factor subunit beta
       FK004_19110 DNA-binding protein
       FK004_17810 DNA helicase RecQ
       FK004_09235 DNA helicase RecQ
       FK004_19100 recombinase RecQ
       FK004_03430 DNA polymerase IV
       FK004_05515 DNA polymerase IV
       FK004_06250 SOS mutagenesis and repair protein UmuC
       FK004_06245 peptidase S24
       FK004_05510 DNA polymerase III subunit alpha
       FK004_06140 recombinase RecX
       FK004_01360 DNA ligase-associated DEXH box helicase
       FK004_02320 ribonucleoside-diphosphate reductase subunit alpha
       FK004_02325 ribonucleoside-diphosphate reductase
       FK004_10600 DHH family phosphoesterase
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phrB; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551 ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
     03029 Mitochondrial biogenesis [BR:fki03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: September 23, 2020