Kfla_1659 Ku protein
       Kfla_0901 Ku protein
       Kfla_4705 DNA polymerase LigD, ligase domain protein
       Kfla_5357 DNA polymerase LigD, polymerase domain protein
       Kfla_2482 DNA polymerase LigD, polymerase domain protein

K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]

       Kfla_0181 methylated-DNA/protein-cysteinemethyltransferase
       Kfla_0036 methylated-DNA/protein-cysteinemethyltransferase
       Kfla_5853 methylated-DNA/protein-cysteinemethyltransferase
       Kfla_5872 Deoxyribodipyrimidine photo-lyase
       Kfla_1200 uracil-DNA glycosylase
       Kfla_5430 DNA-3-methyladenine glycosylase
       Kfla_6428 HhH-GPD family protein
       Kfla_0455 endonuclease III
       Kfla_5938 helicase domain protein
       Kfla_0429 NUDIX hydrolase
       Kfla_5534 NUDIX hydrolase
       Kfla_0285 NUDIX hydrolase
       Kfla_5377 NUDIX hydrolase
       Kfla_2272 NUDIX hydrolase
       Kfla_4724 NUDIX hydrolase
       Kfla_6947 NUDIX hydrolase
       Kfla_3766 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
       Kfla_3967 deoxyribodipyrimidine photolyase-related protein
       Kfla_2488 Uracil-DNA glycosylase superfamily
       Kfla_0911 Uracil-DNA glycosylase superfamily
       Kfla_5692 Uracil-DNA glycosylase superfamily
       Kfla_5855 transcriptional regulator, AraC family
       Kfla_1871 transcriptional regulator, AraC family
       Kfla_5506 DNA-3-methyladenine glycosylase I
       Kfla_0157 DNA-formamidopyrimidine glycosylase
       Kfla_4802 formamidopyrimidine-DNA glycosylase
       Kfla_2252 DNA-(apurinic or apyrimidinic site) lyase
       Kfla_2997 DNA-(apurinic or apyrimidinic site) lyase
       Kfla_2532 exodeoxyribonuclease III Xth
       Kfla_3415 exodeoxyribonuclease III Xth
       Kfla_7004 Xylose isomerase domain protein TIM barrel
       Kfla_2766 Deoxyribonuclease V
       Kfla_4906 DNA ligase, NAD-dependent
       Kfla_3966 DNA ligase, NAD-dependent
       Kfla_3089 DNA polymerase I
       Kfla_3239 excinuclease ABC, A subunit
       Kfla_3112 excinuclease ABC, B subunit
       Kfla_3255 excinuclease ABC, C subunit
       Kfla_1260 ATP-dependent DNA helicase PcrA
       Kfla_5337 UvrD/REP helicase
       Kfla_5348 UvrD/REP helicase
       Kfla_6143 DNA-directed RNA polymerase, beta subunit
       Kfla_6142 DNA-directed RNA polymerase, beta' subunit
       Kfla_6100 DNA-directed RNA polymerase, alpha subunit
       Kfla_4333 DNA-directed RNA polymerase, omega subunit
       Kfla_5701 transcription-repair coupling factor
       Kfla_5578 exodeoxyribonuclease VII, large subunit
       Kfla_5579 exodeoxyribonuclease VII, small subunit
       Kfla_2902 DNA polymerase III, alpha subunit
       Kfla_0002 DNA polymerase III, beta subunit
       Kfla_2700 DNA polymerase III, beta subunit
       Kfla_2380 DNA polymerase III, delta subunit
       Kfla_0588 DNA-directed DNA polymerase
       Kfla_2797 DNA polymerase III, epsilon subunit
       Kfla_4594 Exonuclease RNase T and DNA polymerase III
       Kfla_0407 DNA polymerase III, subunits gamma and tau
       Kfla_2212 single-strand binding protein
       Kfla_7000 single-strand binding protein
       Kfla_0382 D12 class N6 adenine-specific DNA methyltransferase
       Kfla_3944 exodeoxyribonuclease V, beta subunit
       Kfla_3945 exodeoxyribonuclease V, gamma subunit
       Kfla_3943 exodeoxyribonuclease V, alpha subunit
       Kfla_3003 recA protein
       Kfla_4404 Holliday junction DNA helicase RuvA
       Kfla_4403 Holliday junction DNA helicase RuvB
       Kfla_4405 crossover junction endodeoxyribonuclease RuvC
       Kfla_4325 Primosomal protein N' (replication factor Y) - superfamily II helicase-like protein
       Kfla_6423 DNA repair protein RadA
       Kfla_0004 DNA replication and repair protein RecF
       Kfla_4808 ATP-dependent DNA helicase RecG
       Kfla_2444 DNA repair protein RecO
       Kfla_0409 recombination protein RecR
       Kfla_5419 DNA repair protein RecN
       Kfla_0333 protein of unknown function DUF853 NPT hydrolase putative
       Kfla_1659 Ku protein
       Kfla_0901 Ku protein
       Kfla_4705 DNA polymerase LigD, ligase domain protein
       Kfla_5357 DNA polymerase LigD, polymerase domain protein
       Kfla_2482 DNA polymerase LigD, polymerase domain protein
       Kfla_0011 DNA gyrase, A subunit
       Kfla_3453 DNA topoisomerase (ATP-hydrolyzing)
       Kfla_0010 DNA gyrase, B subunit
       Kfla_3443 DNA topoisomerase (ATP-hydrolyzing)
       Kfla_0581 DNA topoisomerase I
       Kfla_3993 conserved hypothetical protein
       Kfla_0905 DNA topoisomerase, type I, putative
       Kfla_1209 histone family protein DNA-binding protein
       Kfla_4855 histone family protein DNA-binding protein
       Kfla_2911 ATP-dependent DNA helicase RecQ
       Kfla_3815 ATP-dependent DNA helicase, RecQ family
       Kfla_3637 DEAD/DEAH box helicase domain protein
       Kfla_0818 helicase domain protein
       Kfla_3992 ATP-dependent DNA helicase, RecQ family
       Kfla_0417 DNA-directed DNA polymerase
       Kfla_6899 DNA-directed DNA polymerase
       Kfla_3424 DNA-directed DNA polymerase
       Kfla_1172 SOS-response transcriptional repressor, LexA
       Kfla_4702 SOS-response transcriptional repressor, LexA
       Kfla_3157 Nucleotidyltransferase/DNA polymerase-like protein involved in DNA repair
       Kfla_3973 DNA polymerase III, alpha subunit
       Kfla_4706 helicase c2
       Kfla_2998 DEAD/H associated domain protein
       Kfla_0822 DEAD/DEAH box helicase domain protein
       Kfla_0965 NUDIX hydrolase
       Kfla_5412 NUDIX hydrolase
       Kfla_1627 NUDIX hydrolase
       Kfla_4697 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
       Kfla_4868 ribonucleoside-diphosphate reductase, alpha subunit
       Kfla_4869 Ribonucleoside-diphosphate reductase
       Kfla_5924 ribonucleotide reductase

K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]