Transcription Factors

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 Eukaryotic type

   Basic leucine zipper (bZIP)

   Basic helix-loop-helix (bHLH)

   Basic helix-loop-helix/leucine zipper (bHLH-ZIP)

   Other basic domains

   Zinc finger

     Cys4 thyroid hormone receptor-like

       K05547  THRA, NR1A1; thyroid hormone receptor alpha
       K08362  THRB, NR1A2; thyroid hormone receptor beta
       K08527  RARA, NR1B1; retinoic acid receptor alpha
       K08528  RARB, NR1B2; retinoic acid receptor beta
       K08529  RARG, NR1B3; retinoic acid receptor gamma
       K07294  NR1C1, PPARA; peroxisome proliferator-activated receptor alpha
       K04504  NR1C2, PPARD; peroxisome proliferator-activated receptor delta
       K08530  NR1C3, PPARG; peroxisome proliferator-activated receptor gamma
       K03728  NR1D1; nuclear receptor subfamily 1 group D member 1
       K08531  NR1D2; nuclear receptor subfamily 1 group D member 2
       K08701  NR1D3; nuclear receptor subfamily 1 group D member 3
       K08532  NR1F1, RORA; RAR-related orphan receptor alpha
       K08533  NR1F2, RORB; RAR-related orphan receptor beta
       K08534  NR1F3, RORC; RAR-related orphan receptor gamma
       K14033  NR1F4; nuclear receptor subfamily 1 group F member 4
       K08536  NR1H3, LXRA; liver X receptor alpha
       K08535  NR1H2, LXRB; liver X receptor beta
       K08537  NR1H4, FXR; farnesoid X receptor
       K08538  NR1H5, FXRB; farnesoid X receptor beta
       K14034  NR1H1, EcR; ecdysone receptor
       K08539  VDR, NR1I1; vitamin D3 receptor
       K08540  NR1I2, PXR; pregnane X receptor
       K08541  NR1I3, CAR; constitutive androstane receptor
       K14035  NR1IN; nuclear receptor subfamily 1 group I

     Cys4 hepatocyte nuclear factor 4-like

     Cys4 estrogen receptor-like

     Cys4 nerve growth factor IB-like

     Cys4 Fushi tarazu-F1-like

     Cys4 germ cell nuclear factor

     Cys4 Knirps/DAX1-like

     Cys4 GATA-factors

     Cys2His2 SP/KLF family and related proteins

     Cys2His2 GLI-like

     Cys2His2 Snail

     Cys2His2 BTB-ZF factors

     Cys2His2 BED

     Cys2His2 PRDM

     Cys2His2 metabolic regulators in fungi

     Cys2His2 others

     Cys2HisCys zinc factors

     Cys3His zinc factors

     Cys2CysHis zinc factors

     CXXC CpG-binding proteins

     Cys6 metabolic regulators in fungi

     Other zinc fingers

   Helix-turn-helix

   beta-Scaffold factors with minor groove contacts

   Other transcription factors

 

 Prokaryotic type
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Last updated: April 5, 2024
Classification taken and modified from TRANSFAC 7.0