KEGG Orthology (KO) - Lactobacillus rhamnosus GG

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:lrg03030]
     03410 Base excision repair [PATH:lrg03410]
       LRHM_1696 formamidopyrimidine-DNA glycosylase
       LRHM_1429 endonuclease III
       LRHM_0505 3-methyladenine DNA glycosylase
       LRHM_2130 DNA-3-methyladenine glycosylase
       LRHM_0915 uracil-DNA glycosylase
       LRHM_0653 A/G-specific DNA glycosylase
       LRHM_1511 3-methyladenine DNA glycosylase
       LRHM_0921 exodeoxyribonuclease III
       LRHM_1495 endonuclease IV
       LRHM_1697 DNA polymerase I
       LRHM_1535 single-strand DNA-specific exonuclease
       LRHM_0974 DNA ligase
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
     03420 Nucleotide excision repair [PATH:lrg03420]
     03430 Mismatch repair [PATH:lrg03430]
     03440 Homologous recombination [PATH:lrg03440]
     03450 Non-homologous end-joining
     03460 Fanconi anemia pathway
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:lrg03000]
     03021 Transcription machinery [BR:lrg03021]
     03019 Messenger RNA biogenesis [BR:lrg03019]
     03041 Spliceosome
     03011 Ribosome [BR:lrg03011]
     03009 Ribosome biogenesis [BR:lrg03009]
     03016 Transfer RNA biogenesis [BR:lrg03016]
     03012 Translation factors [BR:lrg03012]
     03110 Chaperones and folding catalysts [BR:lrg03110]
     04131 Membrane trafficking [BR:lrg04131]
     04121 Ubiquitin system
     03051 Proteasome
     03032 DNA replication proteins [BR:lrg03032]
     03036 Chromosome and associated proteins [BR:lrg03036]
     03400 DNA repair and recombination proteins [BR:lrg03400]
       LRHM_0157 methylated-DNA--protein-cysteine methyltransferase
       LRHM_0915 uracil-DNA glycosylase
       LRHM_1511 3-methyladenine DNA glycosylase
       LRHM_0653 A/G-specific DNA glycosylase
       LRHM_1429 endonuclease III
       LRHM_2486 conserved hypothetical protein
       LRHM_2453 hydrolase
       LRHM_0118 ADP-ribose pyrophosphatase
       LRHM_2252 dUTPase
       LRHM_0505 3-methyladenine DNA glycosylase
       LRHM_2130 DNA-3-methyladenine glycosylase
       LRHM_1696 formamidopyrimidine-DNA glycosylase
       LRHM_0921 exodeoxyribonuclease III
       LRHM_1495 endonuclease IV
       LRHM_1535 single-strand DNA-specific exonuclease
       LRHM_0974 DNA ligase
       LRHM_1697 DNA polymerase I
       LRHM_0881 excinuclease ABC subunit A
       LRHM_2525 excinuclease ATPase subunit
       LRHM_0880 excinuclease ABC subunit B
       LRHM_1302 excinuclease ABC subunit C
       LRHM_0973 DNA helicase
       LRHM_1898 DNA and RNA helicase
       LRHM_2406 DNA-directed RNA polymerase subunit beta
       LRHM_2405 DNA-directed RNA polymerase subunit beta'
       LRHM_2370 DNA-directed RNA polymerase subunit alpha
       LRHM_2449 DNA-directed RNA polymerase subunit delta
       LRHM_1609 RNA polymerase omega subunit
       LRHM_2419 transcription-repair coupling factor
       LRHM_2149 DNA mismatch repair protein
       LRHM_0751 ATPase
       LRHM_2148 DNA mismatch repair protein
       LRHM_1618 exodeoxyribonuclease VII large subunit
       LRHM_1617 exodeoxyribonuclease VII small subunit
       LRHM_1317 DNA polymerase III subunit alpha
       LRHM_1554 DNA polymerase III subunit alpha
       LRHM_0002 DNA-directed DNA polymerase III subunit beta
       LRHM_1282 DNA polymerase III subunit delta
       LRHM_2172 DNA polymerase III subunit delta'
       LRHM_0920 DNA polymerase III subunit epsilon
       LRHM_2178 DNA polymerase III subunits gamma and tau
       LRHM_0009 single-strand DNA-binding protein
       LRHM_0011 single-strand DNA-binding protein
       LRHM_1056 single-strand DNA binding protein
       LRHM_1254 exodeoxyribonuclease V subunit alpha
       LRHM_2001 helicase
       LRHM_0846 recombinase RecA
       LRHM_2538 recombinase RecA
       LRHM_0730 Holliday junction ATP-dependent DNA helicase RuvA
       LRHM_0731 Holliday junction ATP-dependent DNA helicase RuvB
       LRHM_1607 primosomal protein N'
       LRHM_0649 exonuclease SbcC
       LRHM_0648 exonuclease SbcD
       LRHM_2251 DNA repair protein RadA
       LRHM_0004 recombination protein RecF
       LRHM_1596 DNA helicase RecG
       LRHM_1486 DNA repair protein RecO
       LRHM_2176 recombination protein RecR
       LRHM_1613 DNA repair protein RecN
       LRHM_1426 Holliday junction-specific endonuclease
       LRHM_1436 ATP-dependent exonuclease subunit A
       LRHM_1437 ATP-dependent exonuclease subunit B
       LRHM_0006 DNA gyrase subunit A
       LRHM_0005 DNA gyrase B subunit
       LRHM_1356 DNA topoisomerase I
       LRHM_1335 DNA-binding protein
       LRHM_1053 phage protein
       LRHM_1330 DNA helicase RecQ
       LRHM_1001 DNA helicase RecQ
       LRHM_0738 DNA-damage-inducible protein P
       LRHM_0967 nucleotidyltransferase/DNA polymerase
       LRHM_0694 transcriptional repressor
       LRHM_1765 conserved hypothetical protein
       LRHM_1435 DNA helicase
       LRHM_1416 ribonucleotide reductase subunit alpha
       LRHM_1417 ribonucleotide reductase beta subunit
       LRHM_0740 phosphoesterase
       LRHM_2676 putative phosphoesterase
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551 ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:3.1.-.- 3.6.4.12]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:3.1.-.- 3.6.4.12]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:3.6.4.12]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
     03029 Mitochondrial biogenesis [BR:lrg03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: January 22, 2020