Messenger RNA Biogenesis - Lipotes vexillifer (Yangtze River dolphin)

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     KO
 Eukaryotic type
   mRNA processing factors
   mRNA surveillance and transport factors
     Transport factors
     Surveillance factors
     Factors involved in mRNA localization
     mRNA cycle factors
       Common to processing body (P body) and stress granule
       P-body specific factors
       Stress granule specific factors
         103091642 TIA1; nucleolysin TIA-1 isoform p40 isoform X1
         103070432 TIAL1; nucleolysin TIAR isoform X1
         103088623 PABPC4; polyadenylate-binding protein 4 isoform X1
         103075279 PABPC5; polyadenylate-binding protein 5
         103086490 PABPC1; polyadenylate-binding protein 1 isoform X1
         103078587 PABPC1L; polyadenylate-binding protein 1-like
         103090251 STAU1; double-stranded RNA-binding protein Staufen homolog 1
         103072837 STAU2; double-stranded RNA-binding protein Staufen homolog 2
         103088381 FXR2; fragile X mental retardation syndrome-related protein 2
         103081379 FMR1; fragile X mental retardation protein 1 homolog isoform X1
         103075133 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X1
         103087702 ZBP1; LOW QUALITY PROTEIN: z-DNA-binding protein 1
         103069565 ELAVL1; ELAV-like protein 1
         103083593 ras GTPase-activating protein-binding protein 1-like
         103073997 G3BP1; ras GTPase-activating protein-binding protein 1
         103075640 G3BP2; ras GTPase-activating protein-binding protein 2 isoform X1
         103077098 EIF2A; eukaryotic translation initiation factor 2A isoform X1
         103088950 EIF3B; eukaryotic translation initiation factor 3 subunit B isoform X1
         103086924 EIF4A1; eukaryotic initiation factor 4A-I isoform X1
         103077428 EIF4A2; eukaryotic initiation factor 4A-II isoform X1
         103090422 EIF4A3; eukaryotic initiation factor 4A-III
         103081992 EIF4B; eukaryotic translation initiation factor 4B
         103086318 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 isoform X1
         103074768 EIF4G2; eukaryotic translation initiation factor 4 gamma 2
         103072575 RPS6KA6; ribosomal protein S6 kinase alpha-6 isoform X1
         103086828 RPS6KA1; ribosomal protein S6 kinase alpha-1 isoform X1
         103078586 RPS6KA2; ribosomal protein S6 kinase alpha-2 isoform X1
         103087256 RPS6KA3; ribosomal protein S6 kinase alpha-3 isoform X1
         103083605 GNB2L1; guanine nucleotide-binding protein subunit beta-2-like 1
         103088738 TRAF2; TNF receptor-associated factor 2
         103069667 nuclear RNA export factor 3-like
         103078847 nuclear RNA export factor 2-like
         103068724 nuclear RNA export factor 2-like
         103072768 NXF1; nuclear RNA export factor 1 isoform X1
         103090438 nuclear RNA export factor 3-like
         103074668 HDAC6; histone deacetylase 6
         103075745 tudor domain-containing protein 3-like isoform X1
         103070044 LARP4B; la-related protein 4B
         103089948 LARP4; la-related protein 4 isoform X1
K13201 TIA1; nucleolysin TIA-1/TIAR 
K13201 TIA1; nucleolysin TIA-1/TIAR 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K13126 PABPC; polyadenylate-binding protein 
K17597 STAU; double-stranded RNA-binding protein Staufen 
K17597 STAU; double-stranded RNA-binding protein Staufen 
K15516 FMR; fragile X mental retardation protein 
K15516 FMR; fragile X mental retardation protein 
K15516 FMR; fragile X mental retardation protein 
K12965 ZBP1; Z-DNA binding protein 1 
K13088 ELAVL1; ELAV-like protein 1 
K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3] 
K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3] 
K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 
K15026 EIF2A; translation initiation factor 2A 
K03253 EIF3B; translation initiation factor 3 subunit B 
K03257 EIF4A; translation initiation factor 4A 
K03257 EIF4A; translation initiation factor 4A 
K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] 
K03258 EIF4B; translation initiation factor 4B 
K03260 EIF4G; translation initiation factor 4G 
K03260 EIF4G; translation initiation factor 4G 
K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] 
K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein 
K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27] 
K14284 NXF; nuclear RNA export factor 
K14284 NXF; nuclear RNA export factor 
K14284 NXF; nuclear RNA export factor 
K14284 NXF; nuclear RNA export factor 
K14284 NXF; nuclear RNA export factor 
K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] 
K18404 TDRD3; tudor domain-containing protein 3 
K18763 LARP4; la-related protein 4 
K18763 LARP4; la-related protein 4 
   mRNA degradation factors
 
 Prokaryotic type

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Last updated: April 9, 2024