KEGG Orthology (KO) - Mycolicibacterium fortuitum

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:mft03030]
     03410 Base excision repair [PATH:mft03410]
     03420 Nucleotide excision repair [PATH:mft03420]
     03430 Mismatch repair [PATH:mft03430]
     03440 Homologous recombination [PATH:mft03440]
     03450 Non-homologous end-joining [PATH:mft03450]
       XA26_13230 Ku domain protein
       XA26_13320 ligD; LigD
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
     03460 Fanconi anemia pathway
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:mft03000]
     03021 Transcription machinery [BR:mft03021]
     03019 Messenger RNA biogenesis [BR:mft03019]
     03041 Spliceosome
     03011 Ribosome [BR:mft03011]
     03009 Ribosome biogenesis [BR:mft03009]
     03016 Transfer RNA biogenesis [BR:mft03016]
     03012 Translation factors [BR:mft03012]
     03110 Chaperones and folding catalysts [BR:mft03110]
     04131 Membrane trafficking [BR:mft04131]
     04121 Ubiquitin system [BR:mft04121]
     03051 Proteasome [BR:mft03051]
     03032 DNA replication proteins [BR:mft03032]
     03036 Chromosome and associated proteins [BR:mft03036]
     03400 DNA repair and recombination proteins [BR:mft03400]
       XA26_43370 Methylated-DNA--protein-cysteine methyltransferase
       XA26_04540 Methylated-DNA--protein-cysteine methyltransferase
       XA26_24880 Deoxyribodipyrimidine photolyase
       XA26_23780 Uracil-DNA glycosylase
       XA26_34940 DNA-3-methyladenine glycosylase II
       XA26_54270 A/G-specific adenine glycosylase
       XA26_55230 Endonuclease III
       XA26_22490 ATP-dependent DNA ligase
       XA26_11450 DNA repair helicase
       XA26_45620 putative mutT-like protein
       XA26_07490 mutT3
       XA26_26760 Deoxyuridine 5'-triphosphate nucleotidohydrolase
       XA26_44510 Uracil-DNA glycosylase
       XA26_43360 Methylated-DNA--protein-cysteine methyltransferase
       XA26_45020 DNA-3-methyladenine glycosylase
       XA26_23960 Formamidopyrimidine-DNA glycosylase
       XA26_13520 Formamidopyrimidine-DNA glycosylase
       XA26_17970 Formamidopyrimidine-DNA glycosylase
       XA26_40340 Formamidopyrimidine-DNA glycosylase
       XA26_08570 Exodeoxyribonuclease III
       XA26_17290 Exodeoxyribonuclease III
       XA26_50080 Exodeoxyribonuclease III
       XA26_13970 Endonuclease IV
       XA26_23300 DNA ligase
       XA26_35500 DNA polymerase I
       XA26_35350 Excinuclease ABC subunit A
       XA26_31910 Excinuclease ABC subunit A
       XA26_35430 Excinuclease ABC subunit B
       XA26_29000 Excinuclease ABC subunit C
       XA26_19470 ATP-dependent DNA helicase
       XA26_19620 ATP-dependent DNA helicase UvrD/PcrA
       XA26_49710 pcrA; PcrA
       XA26_13940 DNA-directed RNA polymerase beta subunit
       XA26_13950 DNA-directed RNA polymerase beta' subunit
       XA26_15280 DNA-directed RNA polymerase alpha subunit
       XA26_28760 DNA-directed RNA polymerase omega subunit
       XA26_48320 Transcription-repair coupling factor
       XA26_46550 Exodeoxyribonuclease VII large subunit
       XA26_46560 Exodeoxyribonuclease VII small subunit
       XA26_29950 DNA polymerase III alpha subunit
       XA26_00020 DNA polymerase III beta subunit
       XA26_39750 DNA polymerase III delta subunit
       XA26_54880 DNA polymerase III delta prime subunit
       XA26_37070 DNA polymerase III epsilon subunit
       XA26_56470 DNA polymerase III epsilon subunit
       XA26_56710 DNA polymerase III subunits gamma and tau
       XA26_60550 Single-stranded DNA-binding protein
       XA26_40550 Single-strand DNA binding protein
       XA26_49820 Exodeoxyribonuclease V beta chain
       XA26_49810 Exodeoxyribonuclease V gamma chain
       XA26_49830 Exodeoxyribonuclease V alpha chain
       XA26_26180 RecA protein
       XA26_27800 ruvA; RuvA
       XA26_27810 ruvB; RuvB
       XA26_27790 Crossover junction endodeoxyribonuclease RuvC
       XA26_28860 Helicase PriA essential for oriC/DnaA-independent DNA replication
       XA26_54230 radA; RadA
       XA26_00040 recF; RecF
       XA26_23820 ATP-dependent DNA helicase RecG
       XA26_39040 recO; RecO
       XA26_56650 recR; RecR
       XA26_34840 recN; RecN
       XA26_13230 Ku domain protein
       XA26_13320 ligD; LigD
       XA26_00080 DNA gyrase subunit A
       XA26_03980 Topoisomerase IV subunit A
       XA26_00060 DNA gyrase subunit B
       XA26_03990 Topoisomerase IV subunit B
       XA26_54900 DNA topoisomerase I
       XA26_23680 DNA-binding protein HU
       XA26_08880 recQ; RecQ
       XA26_29850 DNA polymerase IV
       XA26_22620 DNA polymerase-like protein
       XA26_58390 DNA polymerase IV
       XA26_26370 SOS-response repressor and protease LexA
       XA26_16450 DNA polymerase-like protein
       XA26_16540 DNA polymerase III alpha subunit
       XA26_26190 recX; RecX
       XA26_43210 yoaA; YoaA
       XA26_17990 putative ATP-dependent helicase lhr
       XA26_23690 putative hydrolase mutT1
       XA26_34770 ADP-ribose pyrophosphatase
       XA26_22670 Ribonucleotide reductase of class Ib (aerobic)
       XA26_22870 Ribonucleotide reductase of class Ib (aerobic)
       XA26_03020 Ribonucleotide-diphosphate reductase subunit beta
       XA26_25390 3'-to-5' oligoribonuclease A
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phrB; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:3.6.4.12]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551 ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:3.6.4.12]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
     03029 Mitochondrial biogenesis [BR:mft03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: February 23, 2020