09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:nre03030]
03410 Base excision repair [PATH:nre03410]
BES08_10160 endonuclease III BES08_13160 uracil-DNA glycosylase BES08_15930 A/G-specific adenine glycosylase BES08_10200 DNA-formamidopyrimidine glycosylase BES08_09815 DNA glycosylase BES08_18645 DNA-3-methyladenine glycosylase BES08_06755 uracil-DNA glycosylase BES08_01970 hypothetical protein BES08_13660 exodeoxyribonuclease III BES08_10210 exodeoxyribonuclease III BES08_14830 DNA polymerase I BES08_05350 single-stranded-DNA-specific exonuclease RecJ BES08_07895 DNA ligase (NAD(+)) LigA
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
03420 Nucleotide excision repair [PATH:nre03420]
03430 Mismatch repair [PATH:nre03430]
03440 Homologous recombination [PATH:nre03440]
03450 Non-homologous end-joining [PATH:nre03450]
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:nre03000]
03021 Transcription machinery [BR:nre03021]
03019 Messenger RNA biogenesis [BR:nre03019]
03041 Spliceosome
03011 Ribosome [BR:nre03011]
03009 Ribosome biogenesis [BR:nre03009]
03016 Transfer RNA biogenesis [BR:nre03016]
03012 Translation factors [BR:nre03012]
03110 Chaperones and folding catalysts [BR:nre03110]
04131 Membrane trafficking [BR:nre04131]
04121 Ubiquitin system
03051 Proteasome [BR:nre03051]
03032 DNA replication proteins [BR:nre03032]
03036 Chromosome and associated proteins [BR:nre03036]
03400 DNA repair and recombination proteins [BR:nre03400]
BES08_24620 cysteine methyltransferase BES08_07780 deoxyribodipyrimidine photolyase BES08_13160 uracil-DNA glycosylase BES08_15930 A/G-specific adenine glycosylase BES08_10160 endonuclease III BES08_06185 S1/P1 Nuclease BES08_17305 endonuclease BES08_02235 DNA mismatch repair protein MutT BES08_19885 NUDIX hydrolase BES08_10425 deoxyuridine 5'-triphosphate nucleotidohydrolase BES08_18920 6-O-methylguanine DNA methyltransferase BES08_28420 deoxyribodipyrimidine photolyase BES08_06755 uracil-DNA glycosylase BES08_01970 hypothetical protein BES08_09815 DNA glycosylase BES08_18645 DNA-3-methyladenine glycosylase BES08_10200 DNA-formamidopyrimidine glycosylase BES08_13660 exodeoxyribonuclease III BES08_10210 exodeoxyribonuclease III BES08_05350 single-stranded-DNA-specific exonuclease RecJ BES08_07895 DNA ligase (NAD(+)) LigA BES08_14830 DNA polymerase I BES08_26310 excinuclease ABC subunit A BES08_08995 excinuclease ABC subunit A BES08_17225 excinuclease ABC subunit B BES08_04775 excinuclease ABC subunit C BES08_07600 DNA helicase II BES08_14755 DNA-directed RNA polymerase subunit beta BES08_14750 DNA-directed RNA polymerase subunit beta' BES08_09145 DNA-directed RNA polymerase subunit alpha BES08_00920 DNA-directed RNA polymerase subunit omega BES08_28015 DEAD/DEAH box helicase BES08_02550 transcription-repair coupling factor BES08_13095 DNA mismatch repair protein MutS BES08_03670 DNA mismatch repair protein MutL BES08_13960 exodeoxyribonuclease VII large subunit BES08_03395 exodeoxyribonuclease VII small subunit BES08_07730 DNA polymerase III subunit alpha BES08_01870 DNA polymerase III subunit beta BES08_10855 DNA polymerase III subunit beta BES08_05530 DNA polymerase III subunit chi BES08_13190 DNA polymerase III subunit delta BES08_04200 DNA polymerase III subunit delta' BES08_13630 DNA polymerase III subunit epsilon BES08_24900 transposase BES08_06180 DNA polymerase III subunit epsilon BES08_23820 DNA polymerase III subunit epsilon BES08_01715 DNA polymerase III subunit gamma/tau BES08_30855 single-stranded DNA-binding protein BES08_31510 single-stranded DNA-binding protein BES08_05700 single-stranded DNA-binding protein BES08_20780 single-stranded DNA-binding protein BES08_07945 recombinase RecA BES08_10595 Holliday junction DNA helicase RuvA BES08_10590 Holliday junction DNA helicase RuvB BES08_10600 crossover junction endodeoxyribonuclease RuvC BES08_05270 primosomal protein N' BES08_14420 metallophosphoesterase BES08_03925 DNA repair protein RadA BES08_17530 DNA replication/repair protein RecF BES08_02570 ATP-dependent DNA helicase RecG BES08_08050 DNA recombination protein RecO BES08_04650 recombination protein RecR BES08_07900 DNA repair protein RecN BES08_02330 double-strand break repair helicase AddA BES08_14505 exodeoxyribonuclease V subunit beta BES08_24100 exodeoxyribonuclease V subunit beta BES08_02325 double-strand break repair protein AddB BES08_14510 hypothetical protein BES08_24095 hypothetical protein BES08_06960 hypothetical protein BES08_11475 ATP-binding protein BES08_29930 AAA family ATPase BES08_17880 Ku protein BES08_25815 Ku protein BES08_21660 DNA ligase D BES08_17875 DNA ligase D BES08_04300 DNA gyrase subunit A BES08_11650 DNA gyrase subunit B BES08_09395 DNA topoisomerase BES08_02100 DNA topoisomerase I BES08_20165 integration host factor BES08_29185 integration host factor BES08_25855 integration host factor BES08_01165 DNA-binding protein HU BES08_06155 integration host factor BES08_24165 integration host factor subunit alpha BES08_05180 integration host factor subunit alpha BES08_29975 integration host factor subunit alpha BES08_28405 integration host factor subunit alpha BES08_28490 integration host factor subunit alpha BES08_12730 integration host factor subunit beta BES08_11285 ATP-dependent DNA helicase RecQ BES08_09495 DNA polymerase IV BES08_25525 DNA polymerase IV BES08_03215 repressor LexA BES08_29650 protein ImuA BES08_06165 protein ImuA BES08_25545 protein ImuA BES08_16085 hypothetical protein BES08_29655 protein ImuB BES08_06170 protein ImuB BES08_25540 protein ImuB BES08_16090 nucleotidyltransferase BES08_06175 dnaE2; error-prone DNA polymerase BES08_25535 dnaE2; error-prone DNA polymerase BES08_16095 error-prone DNA polymerase BES08_29660 dnaE2; error-prone DNA polymerase BES08_08780 hypothetical protein BES08_02935 helicase BES08_15430 DNA ligase-associated DEXH box helicase BES08_15630 ribonucleotide-diphosphate reductase subunit alpha BES08_10475 ribonucleotide-diphosphate reductase subunit beta BES08_07130 ribonucleotide-diphosphate reductase subunit beta
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K05986 NUCS; nuclease S1 [EC:3.1.30.1] K05986 NUCS; nuclease S1 [EC:3.1.30.1] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03555 mutS; DNA mismatch repair protein MutS K03572 mutL; DNA mismatch repair protein MutL K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K03547 sbcD; DNA repair protein SbcD/Mre11 K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] K19789 radD; DNA repair protein RadD K06915 herA; DNA double-strand break repair helicase HerA and related ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase K10979 ku; DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta K04764 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha K05788 ihfB; integration host factor subunit beta K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K01356 lexA; repressor LexA [EC:3.4.21.88] K14160 imuA; protein ImuA K14160 imuA; protein ImuA K14160 imuA; protein ImuA K14160 imuA; protein ImuA K14161 imuB; protein ImuB K14161 imuB; protein ImuB K14161 imuB; protein ImuB K14161 imuB; protein ImuB K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K03565 recX; regulatory protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
03029 Mitochondrial biogenesis [BR:nre03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Novosphingobium resinovorum KEGG Orthology (KO) - Novosphingobium resinovorum