DNA Repair and Recombination Proteins - Ovis aries (sheep)

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     KO
 Eukaryotic type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
       DNA glycosylases
       AP endonucleases
       Long Patch-BER factors
         DNA polymerase delta complex
         DNA polymerase epsilon complex
         443155 PCNA; proliferating cell nuclear antigen
K04802 PCNA; proliferating cell nuclear antigen 
         100307042 FEN1; flap endonuclease 1
K04799 FEN1; flap endonuclease-1 [EC:3.-.-.-] 
         101104173 LIG1; DNA ligase 1 isoform X1
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
       Short Patch-BER factors
       Other BER factors
     NER (nucleotide excision repair)
       GGR (global genome repair) factors
       TCR (transcription coupled repair) factors
       TFIIH complex
       RPA (replication factor A)
       Other NER factors
         101103949 XPA; DNA repair protein complementing XP-A cells isoform X1
         101116856 ERCC1; DNA excision repair protein ERCC-1 isoform X1
         101109669 ERCC4; DNA repair endonuclease XPF
         101114031 ERCC5; DNA repair protein complementing XP-G cells isoform X1
         101104173 LIG1; DNA ligase 1 isoform X1
         101114322 MMS19; MMS19 nucleotide excision repair protein homolog isoform X2
         101122669 CUL3; cullin-3 isoform X1
         101105597 CUL5; cullin-5
         101107798 ELOC; elongin-C
         105616454 elongin-C
         101118496 ELOB; elongin-B
         101120903 ELOA; elongin-A isoform X1
K10847 XPA; DNA-repair protein complementing XP-A cells 
K10849 ERCC1; DNA excision repair protein ERCC-1 
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] 
K10846 ERCC5; DNA excision repair protein ERCC-5 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
K15075 MET18; DNA repair/transcription protein MET18/MMS19 
K03869 CUL3; cullin 3 
K10612 CUL5; cullin 5 
K03872 ELOC; elongin-C 
K03872 ELOC; elongin-C 
K03873 ELOB; elongin-B 
K15076 ELOA; elongin-A 
     MMR (mismatch excision repair)
       Mismatch and loop recognition factors
       MutS homologs specialized for meiosis
       MutL homologs
       DNA polymerase delta complex
       RPA (replication factor A)
       RFC (replication factor C)
       Other MMR factors
         443155 PCNA; proliferating cell nuclear antigen
         101120258 EXO1; exonuclease 1
         101112071 HMGB1; high mobility group protein B1
         101104173 LIG1; DNA ligase 1 isoform X1
K04802 PCNA; proliferating cell nuclear antigen 
K10746 EXO1; exonuclease 1 [EC:3.1.-.-] 
K10802 HMGB1; high mobility group protein B1 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Check point factors
   Other factors with a suspected DNA repair function
 
 Prokaryotic type

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Last updated: September 9, 2019