Chromosome and Associated Proteins - Oryzias latipes (Japanese medaka)

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     KO
 Eukaryotic type
   Sister chromatid cohesion proteins
   Meiosis-specific proteins
   Nucleosome assembly factors
   Histone modification proteins
     HATs (histone acetyltransferases)
     HAT complexes
     HDACs (histone deacetylases)
     HDAC complexes
     HMTs (histone methyltransferases)
       HKMTs (histone lysine methyltransferases)
         101156847 ash1l; histone-lysine N-methyltransferase ASH1L isoform X1
         101161417 histone-lysine N-methyltransferase ASH1L isoform X2
         101166952 dot1l; histone-lysine N-methyltransferase, H3 lysine-79 specific isoform X1
         101171173 histone-lysine N-methyltransferase EHMT1 isoform X1
         101167635 histone-lysine N-methyltransferase EHMT1 isoform X1
         101167716 ehmt2; histone-lysine N-methyltransferase EHMT2
         101166385 ezh1; histone-lysine N-methyltransferase EZH1
         100125823 ezh2; histone-lysine N-methyltransferase EZH2
         101171020 kmt2a; histone-lysine N-methyltransferase 2A isoform X1
         101172242 kmt2d; histone-lysine N-methyltransferase 2D isoform X1
         101162786 histone-lysine N-methyltransferase 2C isoform X1
         101171448 histone-lysine N-methyltransferase 2C isoform X1
         101174945 kmt2b; histone-lysine N-methyltransferase 2B isoform X1
         101157226 histone-lysine N-methyltransferase 2B
         101162568 kmt2e; histone-lysine N-methyltransferase 2E isoform X1
         101160669 histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific
         101161079 histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific isoform X2
         101172132 nsd2; histone-lysine N-methyltransferase NSD2
         101156018 nsd3; histone-lysine N-methyltransferase NSD3 isoform X1
         101156736 PR domain zinc finger protein 2
         101157610 prdm2; PR domain zinc finger protein 2 isoform X1
         101169474 mecom; MDS1 and EVI1 complex locus protein EVI1 isoform X1
         105354834 prdm6; putative histone-lysine N-methyltransferase PRDM6
         101168249 histone-lysine N-methyltransferase PRDM9
         101160915 prdm8; PR domain zinc finger protein 8
         101164500 PR domain zinc finger protein 8 isoform X2
         101159281 prdm12; PR domain zinc finger protein 12
         101172909 PR domain zinc finger protein 12
         101156011 prdm16; PR domain zinc finger protein 16 isoform X1
         101168786 histone-lysine N-methyltransferase SETD1A
         101162384 setd1b; histone-lysine N-methyltransferase SETD1B isoform X1
         101163764 setd2; histone-lysine N-methyltransferase SETD2 isoform X1
         101154890 setd4; SET domain-containing protein 4 isoform X1
         101166221 setd6; N-lysine methyltransferase SETD6
         101168630 setd7; histone-lysine N-methyltransferase SETD7
         101172663 N-lysine methyltransferase KMT5A isoform X4
         101169793 kmt5a; N-lysine methyltransferase KMT5A isoform X1
         101158302 setdb1; histone-lysine N-methyltransferase SETDB1
         101163233 histone-lysine N-methyltransferase SETDB2 isoform X1
         101172575 histone-lysine N-methyltransferase SETMAR
         101169349 smyd3; histone-lysine N-methyltransferase SMYD3
         101161247 histone-lysine N-methyltransferase SMYD1 isoform X2
         101164768 smyd2; N-lysine methyltransferase SMYD2 isoform X1
         101173073 histone-lysine N-methyltransferase Smyd1
         101159335 N-lysine methyltransferase SMYD2-A
         101155408 suv39h1; histone-lysine N-methyltransferase SUV39H1 isoform X1
         101165555 uncharacterized protein LOC101165555
         101156070 kmt5b; histone-lysine N-methyltransferase KMT5B isoform X1
K06101 ASH1L; [histone H3]-lysine4 N-trimethyltransferase ASH1L [EC:2.1.1.354] 
K06101 ASH1L; [histone H3]-lysine4 N-trimethyltransferase ASH1L [EC:2.1.1.354] 
K11427 DOT1L; [histone H3]-lysine79 N-trimethyltransferase [EC:2.1.1.360] 
K11420 EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT [EC:2.1.1.355] 
K11420 EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT [EC:2.1.1.355] 
K11420 EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT [EC:2.1.1.355] 
K17451 EZH1; [histone H3]-lysine27 N-trimethyltransferase EZH1 [EC:2.1.1.356] 
K11430 EZH2; [histone H3]-lysine27 N-trimethyltransferase EZH2 [EC:2.1.1.356] 
K09186 MLL1; [histone H3]-lysine4 N-trimethyltransferase MLL1 [EC:2.1.1.354] 
K09187 MLL2; [histone H3]-lysine4 N-trimethyltransferase MLL2 [EC:2.1.1.354] 
K09188 MLL3; [histone H3]-lysine4 N-trimethyltransferase MLL3 [EC:2.1.1.354] 
K09188 MLL3; [histone H3]-lysine4 N-trimethyltransferase MLL3 [EC:2.1.1.354] 
K14959 MLL4; [histone H3]-lysine4 N-trimethyltransferase MLL4 [EC:2.1.1.354] 
K14959 MLL4; [histone H3]-lysine4 N-trimethyltransferase MLL4 [EC:2.1.1.354] 
K09189 MLL5; [histone H3]-lysine4 N-trimethyltransferase MLL5 [EC:2.1.1.354] 
K15588 NSD1; [histone H3]-lysine36 N-dimethyltransferase NSD1 [EC:2.1.1.357] 
K15588 NSD1; [histone H3]-lysine36 N-dimethyltransferase NSD1 [EC:2.1.1.357] 
K11424 WHSC1; [histone H3]-lysine36 N-dimethyltransferase NSD2 [EC:2.1.1.357] 
K11425 WHSC1L1; [histone H3]-lysine4 N-dimethyltransferase / [histone H3]-lysine27 N-dimethyltransferase [EC:2.1.1.370 2.1.1.371] 
K11432 PRDM2; [histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:2.1.1.355] 
K11432 PRDM2; [histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:2.1.1.355] 
K04462 MECOM; [histone H3]-lysine9 N-methyltransferase (ecotropic virus integration site 1 protein) [EC:2.1.1.367] 
K20795 PRDM6; [histone H4]-lysine20 N-methyltransferase PRDM6 [EC:2.1.1.361] 
K20796 PRDM7_9; [histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:2.1.1.354] 
K20797 PRDM8; PR domain zinc finger protein 8 [EC:2.1.1.-] 
K20797 PRDM8; PR domain zinc finger protein 8 [EC:2.1.1.-] 
K24255 PRDM12; PR domain zinc finger protein 12 [EC:2.1.1.-] 
K24255 PRDM12; PR domain zinc finger protein 12 [EC:2.1.1.-] 
K22410 PRDM16; [histone H3]-lysine9 N-methyltransferase [EC:2.1.1.367] 
K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] 
K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] 
K11423 SETD2; [histone H3]-lysine36 N-trimethyltransferase [EC:2.1.1.359] 
K27277 SETD4; SET domain-containing protein 4 [EC:2.1.1.- 2.1.1.364] 
K05302 SETD6; N-lysine methyltransferase SETD6 [EC:2.1.1.-] 
K11431 SETD7; [histone H3]-lysine4 N-methyltransferase [EC:2.1.1.364] 
K11428 SETD8; [histone H4]-lysine20 N-methyltransferase SETD8 [EC:2.1.1.361] 
K11428 SETD8; [histone H4]-lysine20 N-methyltransferase SETD8 [EC:2.1.1.361] 
K11421 SETDB1; [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:2.1.1.366] 
K18494 SETDB2; [histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:2.1.1.355] 
K11433 SETMAR; [histone H3]-lysine36 N-dimethyltransferase SETMAR [EC:2.1.1.357] 
K11426 SMYD; [histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:2.1.1.354 2.1.1.357] 
K11426 SMYD; [histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:2.1.1.354 2.1.1.357] 
K11426 SMYD; [histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:2.1.1.354 2.1.1.357] 
K11426 SMYD; [histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:2.1.1.354 2.1.1.357] 
K11426 SMYD; [histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:2.1.1.354 2.1.1.357] 
K11419 SUV39H; [histone H3]-lysine9 N-trimethyltransferase SUV39H [EC:2.1.1.355] 
K11429 SUV420H; [histone H4]-N-methyl-L-lysine20 N-methyltransferase [EC:2.1.1.362] 
K11429 SUV420H; [histone H4]-N-methyl-L-lysine20 N-methyltransferase [EC:2.1.1.362] 
       PRMTs (protein arginine metyltransferases)
     HMT complexes
       COMPASS/SET1 complex
         101168786 histone-lysine N-methyltransferase SETD1A
         101162384 setd1b; histone-lysine N-methyltransferase SETD1B isoform X1
         101158437 cxxc1; CXXC-type zinc finger protein 1 isoform X1
         101175046 CXXC-type zinc finger protein 1 isoform X1
         101164873 rbbp5; retinoblastoma-binding protein 5 isoform X1
         101173843 WD repeat-containing protein 82
         110015105 wdr82; WD repeat-containing protein 82
         101166483 wdr5; WD repeat-containing protein 5
         101168557 ash2l; set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1
         101157935 hcfc1; host cell factor 1
K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] 
K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] 
K14960 CXXC1; COMPASS component SPP1 
K14960 CXXC1; COMPASS component SPP1 
K14961 RBBP5; COMPASS component SWD1 
K14962 WDR82; COMPASS component SWD2 
K14962 WDR82; COMPASS component SWD2 
K14963 WDR5; COMPASS component SWD3 
K14964 ASH2; Set1/Ash2 histone methyltransferase complex subunit ASH2 
K14966 HCFC1; host cell factor 1 
       COMPASS/SET1 complex (yeast)
         101168786 histone-lysine N-methyltransferase SETD1A
         101162384 setd1b; histone-lysine N-methyltransferase SETD1B isoform X1
         101158437 cxxc1; CXXC-type zinc finger protein 1 isoform X1
         101175046 CXXC-type zinc finger protein 1 isoform X1
         101164873 rbbp5; retinoblastoma-binding protein 5 isoform X1
         101173843 WD repeat-containing protein 82
         110015105 wdr82; WD repeat-containing protein 82
         101166483 wdr5; WD repeat-containing protein 5
K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] 
K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] 
K14960 CXXC1; COMPASS component SPP1 
K14960 CXXC1; COMPASS component SPP1 
K14961 RBBP5; COMPASS component SWD1 
K14962 WDR82; COMPASS component SWD2 
K14962 WDR82; COMPASS component SWD2 
K14963 WDR5; COMPASS component SWD3 
       MLL-HCF complex
       MLL3/MLL4 complex
       Dot1-containing complex
     Histone demethylases
     Polycomb repressive complex (PRC) and associated proteins
     Sir proteins
     Other histone modification proteins
   Chromosome condensation proteins
   Centromeric chromatin formation proteins
   Heterochromatin formation proteins
   Gene silencing
   Centrosome formation proteins
   Sister chromatid separation proteins
   Chromatin remodeling factors
 
 Prokaryotic type

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Last updated: April 10, 2024