DNA Repair and Recombination Proteins - Physeter catodon (sperm whale)

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     KO
 Eukaryotic type
   SSBR (single strand breaks repair)
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Check point factors
     Rad9-Hus1-Rad1 complex
     HRAD17(Rad24)-RFC complex
     Rad17-Mec3-Ddc1 complex
     FPC (fork protection complex)
     Triple T complex
     BAG6-UBL4A-GET4 complex
     Other check point factors
       102979131 ATR; serine/threonine-protein kinase ATR isoform X1
       102980193 ATRIP; ATR-interacting protein isoform X1
       102975752 ATM; serine-protein kinase ATM isoform X1
       102985658 TP53; cellular tumor antigen p53
       102989266 CHEK1; serine/threonine-protein kinase Chk1 isoform X1
       102986126 CHEK2; serine/threonine-protein kinase Chk2 isoform X1
       102992519 CDC25A; M-phase inducer phosphatase 1 isoform X1
       102979525 CDC25B; M-phase inducer phosphatase 2 isoform X1
       102978115 CDC25C; M-phase inducer phosphatase 3 isoform X1
       102984255 YWHAB; LOW QUALITY PROTEIN: 14-3-3 protein beta/alpha
       102977339 YWHAQ; LOW QUALITY PROTEIN: 14-3-3 protein theta
       102993808 LOW QUALITY PROTEIN: 14-3-3 protein zeta/delta-like
       102984179 14-3-3 protein beta/alpha-like
       112067524 LOW QUALITY PROTEIN: 14-3-3 protein beta/alpha-like
       102995638 YWHAH; 14-3-3 protein eta
       102986425 YWHAG; 14-3-3 protein gamma isoform X1
       102982286 YWHAE; 14-3-3 protein epsilon isoform X1
       114488017 neuron navigator 2-like
       102981541 WEE2; wee1-like protein kinase 2
       102982250 WEE1; wee1-like protein kinase isoform X1
       102992286 PER1; period circadian protein homolog 1 isoform X1
       102989201 PER2; period circadian protein homolog 2 isoform X1
       102985412 PER3; period circadian protein homolog 3 isoform X2
       102977791 MDC1; mediator of DNA damage checkpoint protein 1 isoform X3
       102980437 PLS3; plastin-3
       102994199 AEN; apoptosis-enhancing nuclease
       102990542 PLK3; serine/threonine-protein kinase PLK3
       102993819 PLK5; LOW QUALITY PROTEIN: inactive serine/threonine-protein kinase PLK5
       102981544 NEK1; serine/threonine-protein kinase Nek1
       102976069 NEK4; serine/threonine-protein kinase Nek4 isoform X4
       102974446 NEK10; serine/threonine-protein kinase Nek10
       102986232 NEK11; LOW QUALITY PROTEIN: serine/threonine-protein kinase Nek11
       102996763 DONSON; protein downstream neighbor of Son
       102983722 KANK2; KN motif and ankyrin repeat domain-containing protein 2
       102983158 KANK1; KN motif and ankyrin repeat domain-containing protein 1 isoform X2
       102974404 KN motif and ankyrin repeat domain-containing protein 3
       102979037 KANK4; KN motif and ankyrin repeat domain-containing protein 4
       102985318 KLLN; LOW QUALITY PROTEIN: killin
       102980445 SLFN11; schlafen family member 11
       102975629 CHMP4C; charged multivesicular body protein 4c
       102976814 VPS4A; vacuolar protein sorting-associated protein 4A isoform X2
       102986996 VPS4B; vacuolar protein sorting-associated protein 4B
       102991398 ZFYVE19; abscission/NoCut checkpoint regulator
       102985813 SDE2; splicing regulator SDE2
K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1] 
K10905 ATRIP; ATR interacting protein 
K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1] 
K04451 TP53; tumor protein p53 
K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1] 
K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1] 
K06645 CDC25A; M-phase inducer phosphatase 1 [EC:3.1.3.48] 
K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48] 
K05867 CDC25C; M-phase inducer phosphatase 3 [EC:3.1.3.48] 
K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta 
K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta 
K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta 
K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta 
K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta 
K16198 YWHAG_H; 14-3-3 protein gamma/eta 
K16198 YWHAG_H; 14-3-3 protein gamma/eta 
K06630 YWHAE; 14-3-3 protein epsilon 
K19483 NAV2; neuron navigator 2 [EC:5.6.2.4] 
K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1] 
K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1] 
K21944 PER1; period circadian protein 1 
K02633 PER2; period circadian protein 2 
K21945 PER3; period circadian protein 3 
K20780 MDC1; mediator of DNA damage checkpoint protein 1 
K17336 PLS3; plastin-3 
K18340 AEN; apoptosis-enhancing nuclease [EC:3.1.-.-] 
K08862 PLK3; polo-like kinase 3 [EC:2.7.11.21] 
K19596 PLK5; inactive serine/threonine-protein kinase PLK5 
K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1] 
K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1] 
K20879 NEK10; serine/threonine-protein kinase Nek10 [EC:2.7.11.1] 
K20880 NEK11; serine/threonine-protein kinase Nek11 [EC:2.7.11.1] 
K22422 DONSON; protein downstream neighbor of Son 
K22808 KANK; KN motif and ankyrin repeat domain-containing protein 
K22808 KANK; KN motif and ankyrin repeat domain-containing protein 
K22808 KANK; KN motif and ankyrin repeat domain-containing protein 
K22808 KANK; KN motif and ankyrin repeat domain-containing protein 
K23389 KLLN; killin 
K24458 SLFN11; schlafen family member 11 [EC:3.6.-.-] 
K24782 CHMP4C; charged multivesicular body protein 4C 
K12196 VPS4; vacuolar protein-sorting-associated protein 4 
K12196 VPS4; vacuolar protein-sorting-associated protein 4 
K24778 ZFYVE19; abscission/NoCut checkpoint regulator 
K25059 SDE2; replication stress response regulator SDE2 
   Other factors with a suspected DNA repair function
 
 Prokaryotic type

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Last updated: March 29, 2024