KEGG Orthology (KO) - Pseudomonas protegens Pf-5

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
 
   09106 Metabolism of other amino acids
     00410 beta-Alanine metabolism [PATH:pfl00410]
     00430 Taurine and hypotaurine metabolism [PATH:pfl00430]
     00440 Phosphonate and phosphinate metabolism [PATH:pfl00440]
     00450 Selenocompound metabolism [PATH:pfl00450]
     00460 Cyanoamino acid metabolism [PATH:pfl00460]
     00471 D-Glutamine and D-glutamate metabolism [PATH:pfl00471]
     00472 D-Arginine and D-ornithine metabolism [PATH:pfl00472]
     00473 D-Alanine metabolism [PATH:pfl00473]
       PFL_6036 alr; alanine racemase
       PFL_5059 ddlB; D-alanine--D-alanine ligase B
       PFL_5194 ddlA; D-alanine--D-alanine ligase
K01775 alr; alanine racemase [EC:5.1.1.1]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
     00480 Glutathione metabolism [PATH:pfl00480]
 
   09107 Glycan biosynthesis and metabolism
     00510 N-Glycan biosynthesis
     00513 Various types of N-glycan biosynthesis
     00512 Mucin type O-glycan biosynthesis
     00515 Mannose type O-glycan biosynthesis
     00514 Other types of O-glycan biosynthesis
     00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
     00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
     00533 Glycosaminoglycan biosynthesis - keratan sulfate
     00531 Glycosaminoglycan degradation
     00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
     00601 Glycosphingolipid biosynthesis - lacto and neolacto series
     00603 Glycosphingolipid biosynthesis - globo and isoglobo series
     00604 Glycosphingolipid biosynthesis - ganglio series
     00540 Lipopolysaccharide biosynthesis [PATH:pfl00540]
     00550 Peptidoglycan biosynthesis [PATH:pfl00550]
       PFL_0927 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       PFL_1782 murB; UDP-N-acetylmuramate dehydrogenase
       PFL_5060 murC; UDP-N-acetylmuramate--L-alanine ligase
       PFL_5063 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
       PFL_5066 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2
       PFL_5059 ddlB; D-alanine--D-alanine ligase B
       PFL_5194 ddlA; D-alanine--D-alanine ligase
       PFL_5065 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
       PFL_3114 uppP; undecaprenyl-diphosphatase UppP
       PFL_5458 PAP2 family protein
       PFL_5894 phosphatidylglycerophosphatase B-like protein
       PFL_5064 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
       PFL_5061 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
       PFL_5853 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
       PFL_0444 mrcA; penicillin-binding protein 1A
       PFL_5258 mrcB; penicillin-binding protein 1B
       PFL_4140 mrdA_1; penicillin-binding protein 2
       PFL_5452 mrdA_2; penicillin-binding protein 2
       PFL_5067 ftsI; peptidoglycan synthetase FtsI
       PFL_5448 dacA; D-alanyl-D-alanine carboxypeptidase DacA
       PFL_1880 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.1.129]
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.1.129 3.4.16.4]
K05365 mrcB; penicillin-binding protein 1B [EC:2.4.1.129 3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
     00511 Other glycan degradation
     00571 Lipoarabinomannan (LAM) biosynthesis
     00572 Arabinogalactan biosynthesis - Mycobacterium
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
   09161 Cancer: overview
 
   09162 Cancer: specific types
 
   09163 Immune disease
 
   09164 Neurodegenerative disease
 
   09165 Substance dependence
 
   09166 Cardiovascular disease
 
   09167 Endocrine and metabolic disease
 
   09171 Infectious disease: bacterial
 
   09172 Infectious disease: viral
 
   09174 Infectious disease: parasitic
 
   09175 Drug resistance: antimicrobial
     01501 beta-Lactam resistance [PATH:pfl01501]
     01502 Vancomycin resistance [PATH:pfl01502]
       PFL_4023 ddpX; D-Ala-D-Ala dipeptidase
       PFL_5059 ddlB; D-alanine--D-alanine ligase B
       PFL_5194 ddlA; D-alanine--D-alanine ligase
       PFL_6036 alr; alanine racemase
       PFL_5065 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
       PFL_5064 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
       PFL_5061 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
     01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pfl01503]
 
   09176 Drug resistance: antineoplastic
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
     01000 Enzymes [BR:pfl01000]
     01001 Protein kinases [BR:pfl01001]
     01009 Protein phosphatases and associated proteins [BR:pfl01009]
     01002 Peptidases [BR:pfl01002]
     01003 Glycosyltransferases [BR:pfl01003]
     01005 Lipopolysaccharide biosynthesis proteins [BR:pfl01005]
     01011 Peptidoglycan biosynthesis and degradation proteins [BR:pfl01011]
       PFL_0927 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       PFL_1782 murB; UDP-N-acetylmuramate dehydrogenase
       PFL_5060 murC; UDP-N-acetylmuramate--L-alanine ligase
       PFL_5063 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
       PFL_5066 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2
       PFL_5065 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
       PFL_5059 ddlB; D-alanine--D-alanine ligase B
       PFL_5194 ddlA; D-alanine--D-alanine ligase
       PFL_6036 alr; alanine racemase
       PFL_5156 murI; glutamate racemase
       PFL_5444 LD-carboxypeptidase family protein
       PFL_5064 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
       PFL_5061 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
       PFL_3114 uppP; undecaprenyl-diphosphatase UppP
       PFL_5458 PAP2 family protein
       PFL_5894 phosphatidylglycerophosphatase B-like protein
       PFL_5323 mviN; integral membrane protein MviN
       PFL_0444 mrcA; penicillin-binding protein 1A
       PFL_5258 mrcB; penicillin-binding protein 1B
       PFL_4140 mrdA_1; penicillin-binding protein 2
       PFL_5452 mrdA_2; penicillin-binding protein 2
       PFL_5067 ftsI; peptidoglycan synthetase FtsI
       PFL_5448 dacA; D-alanyl-D-alanine carboxypeptidase DacA
       PFL_1880 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
       PFL_3993 pbpG; D-alanyl-D-alanine endopeptidase
       PFL_5853 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
       PFL_4276 ErfK/YbiS/YcfS/YnhG family protein
       PFL_2412 putative peptidoglycan binding domain protein
       PFL_4023 ddpX; D-Ala-D-Ala dipeptidase
       PFL_1936 putative soluble lytic transglycosylase
       PFL_5792 transglycosylase
       PFL_5450 mltB; lytic murein transglycosylase B
       PFL_5443 lytic murein transglycosylase family protein
       PFL_3300 putative membrane-bound lytic murein transglycosylase
       PFL_1075 mltF; membrane-bound lytic murein transglycosylase F
       PFL_6176 amiC; N-acetylmuramoyl-L-alanine amidase
       PFL_0563 N-acetylmuramoyl-L-alanine amidase
       PFL_0088 amiD; N-acetylmuramoyl-L-alanine amidase AmiD
       PFL_0853 ampD; N-acetyl-anhydromuramyl-L-alanine amidase AmpD
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01776 murI; glutamate racemase [EC:5.1.1.3]
K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
K03980 murJ; putative peptidoglycan lipid II flippase
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.1.129 3.4.16.4]
K05365 mrcB; penicillin-binding protein 1B [EC:2.4.1.129 3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.1.129]
K16291 erfK; L,D-transpeptidase ErfK/SrfK
K21470 ycbB; L,D-transpeptidase YcbB
K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
K08309 slt; soluble lytic murein transglycosylase [EC:4.2.2.-]
K08304 mltA; membrane-bound lytic murein transglycosylase A [EC:4.2.2.-]
K08305 mltB; membrane-bound lytic murein transglycosylase B [EC:4.2.2.-]
K08305 mltB; membrane-bound lytic murein transglycosylase B [EC:4.2.2.-]
K08307 mltD; membrane-bound lytic murein transglycosylase D [EC:4.2.2.-]
K18691 mltF; membrane-bound lytic murein transglycosylase F [EC:4.2.2.-]
K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
K11066 E3.5.1.28D; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
     01004 Lipid biosynthesis proteins [BR:pfl01004]
     01008 Polyketide biosynthesis proteins [BR:pfl01008]
     01006 Prenyltransferases [BR:pfl01006]
     01007 Amino acid related enzymes [BR:pfl01007]
     00199 Cytochrome P450
     00194 Photosynthesis proteins [BR:pfl00194]
 
   09182 Protein families: genetic information processing
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: June 25, 2019