KEGG Orthology (KO) - Scheffersomyces stipitis

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:pic03030]
     03410 Base excision repair [PATH:pic03410]
     03420 Nucleotide excision repair [PATH:pic03420]
     03430 Mismatch repair [PATH:pic03430]
     03440 Homologous recombination [PATH:pic03440]
       PICST_53629 RAD50; DNA repair protein
       PICST_32483 double-strand break repair protein MRE11
       PICST_59212 TEL1; phosphatidylinositol kinase
       PICST_34019 predicted protein
       PICST_58642 DNA-repair
       PICST_81646 RFA1; DNA replication factor A
       PICST_47651 predicted protein
       PICST_63063 predicted protein
       PICST_66275 RAD59; protein involved in mitotic recombination and DNA repair
       PICST_53653 RAD54; protein required for X-ray damage repair, mitotic recombination, and full meiotic recombination. mRNA increases in meiosis
       PICST_15102 RDH54; helicase
       PICST_63206 DPOD; DNA polymerase delta catalytic subunit (DNA polymerase III)
       PICST_40682 HYS2; DNA polymerase delta small subunit (Hydroxyurea sensitive protein HYS2)
       PICST_52157 predicted protein
       PICST_47969 SGS1; ATP-dependent DNA helicase
       PICST_34564 TOP3; DNA topoisomerase
       PICST_61121 endonuclease
K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
K10865 MRE11; double-strand break repair protein MRE11
K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
K10881 SHFM1; 26 proteasome complex subunit DSS1
K10958 RAD57; DNA repair protein RAD57
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10740 RPA3; replication factor A3
K10959 RAD59; DNA repair protein RAD59
K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-]
K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:3.6.4.-]
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03504 POLD3; DNA polymerase delta subunit 3
K10901 BLM; bloom syndrome protein [EC:3.6.4.12]
K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
     03450 Non-homologous end-joining [PATH:pic03450]
     03460 Fanconi anemia pathway
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
     01000 Enzymes [BR:pic01000]
     01001 Protein kinases [BR:pic01001]
       PICST_68202 TPK2; cAMP-dependent protein kinase catalytic subunit
       PICST_70266 camp-dependent protein kinase
       PICST_81215 protein kinase C []
       PICST_20073 predicted protein
       PICST_924 PKH1; serine/threonine protein kinase
       PICST_83871 PKH2; aspartic proteinase precursor
       PICST_65437 predicted protein
       PICST_65306 YPK2; Serine/threonine-protein kinase
       PICST_56396 PSK1; Ribosomal protein S6 kinase and related proteins
       PICST_88182 response regulator receiver
       PICST_59677 Calcium/calmodulin-dependent protein kinase
       PICST_33177 CHK1; checkpoint kinase 1
       PICST_68332 SNF1; carbon catabolite derepressing ser/thr protein kinase
       PICST_76263 ser/thr protein kinase
       PICST_67855 serine/threonine-protein kinase HSL1
       PICST_65458 KIN2; [Hydroxymethylglutaryl-CoA reductase(NADPH)] kinase KIN2
       PICST_32412 PAK3; ser/thr protein kinase
       PICST_29649 protein kinase
       PICST_65270 YCK2; casein kinase I
       PICST_89119 YCK1; casein kinase I
       PICST_67511 HRR25; casein kinase I
       PICST_54142 KIN28; serine-threonine kinase, subunit of RNA Pol TFIIK
       PICST_89025 SSN3; cyclin-dependent serine/threonine protein kinase
       PICST_5847 CRK1; Cdc2-related protein kinase (SGV1)
       PICST_77457 CTK1; kinase of RNA polymerase II carboxy-terminal domain (CTD), alpha subunit
       PICST_33003 serine/threonine protein kinase
       PICST_38082 ERK1; Extracellular signal-regulated kinase 1 (ERK1) (MAP kinase 1) (MAPK 1)
       PICST_18249 predicted protein
       PICST_54431 predicted protein
       PICST_62189 predicted protein
       PICST_77550 RIM11; ser/thr protein kinase
       PICST_15651 YAK2; serine-threonine protein kinase, PKA suppressor
       PICST_81803 YAK1; serine-threonine protein kinase
       PICST_17706 IME2; positive regulator of meiosis, MAPK related ser/thr protein kinase
       PICST_37422 SKY1; serine kinase
       PICST_35816 predicted protein
       PICST_33851 STE7; Serine/threonine-protein kinase STE7 homolog
       PICST_40600 protein-tyrosine kinase
       PICST_84188 CST20; serine/threonine kinase
       PICST_82371 Serine/threonine-protein kinase
       PICST_62297 SPS1; Serine/threonine protein kinase
       PICST_67318 predicted protein
       PICST_76656 predicted protein
       PICST_28119 SSK2; Suppressor of Sensor Kinase (SLN1)
       PICST_35896 predicted protein
       PICST_34966 predicted protein
       PICST_38480 serine/threonine kinase
       PICST_69545 CKA1; alpha subunit of casein kinase II
       PICST_86322 CKA2; Casein kinase II, alpha subunit Cell cycle control, cell division, chromosome partitioning
       PICST_47968 predicted protein
       PICST_44052 serine/threonine protein kinase
       PICST_40723 STK1; serine/threonine protein kinase
       PICST_79384 KIN3; G2-specific serine/threonine protein kinase
       PICST_60715 eIF2-alpha Serine/threonine-protein kinase
       PICST_43429 predicted protein
       PICST_80289 SCY1; Suppressor of GTPase mutant
       PICST_47887 MPS1; Protein kinase
       PICST_40055 ATG1; Serine/threonine-protein kinase ATG1 (Autophagy-related protein 1)
       PICST_83988 predicted protein
       PICST_30558 predicted protein
       PICST_80246 ABC1; mitochondrial chaperone
       PICST_32202 predicted protein
       PICST_52708 predicted protein
       PICST_90317 predicted protein
       PICST_59212 TEL1; phosphatidylinositol kinase
       PICST_33151 TOR2; 1-phosphatidylinositol 3-kinase
       PICST_47351 TRA12; Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily TRA1
       PICST_167 predicted protein
       PICST_82126 RIO1; protein serine kinase
       PICST_33379 predicted protein
       PICST_53820 predicted protein
       PICST_46278 MCK1; serine/threonine/tyrosine protein kinase involved in chromosome segregation
       PICST_84973 SLN1; histidine kinase osmosensor Osmolarity two-component system protein SLN1
       PICST_73542 NIK1; histidine kinase osmosensor
K04345 PKA; protein kinase A [EC:2.7.11.11]
K04345 PKA; protein kinase A [EC:2.7.11.11]
K02677 PRKCA; classical protein kinase C alpha type [EC:2.7.11.13]
K08850 AURKX; aurora kinase, other [EC:2.7.11.1]
K06276 PDPK1; 3-phosphoinositide dependent protein kinase-1 [EC:2.7.11.1]
K06276 PDPK1; 3-phosphoinositide dependent protein kinase-1 [EC:2.7.11.1]
K19800 SCH9; serine/threonine protein kinase SCH9 [EC:2.7.11.1]
K13303 SGK2; serum/glucocorticoid-regulated kinase 2 [EC:2.7.11.1]
K22008 PSK1; serine/threonine-protein kinase Psk1 [EC:2.7.11.1]
K12767 RIM15; serine/threonine-protein kinase RIM15 [EC:2.7.11.1]
K08794 CAMK1; calcium/calmodulin-dependent protein kinase I [EC:2.7.11.17]
K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
K12761 SNF1; carbon catabolite-derepressing protein kinase [EC:2.7.11.1]
K06668 GIN4; serine/threonine-protein kinase GIN4 [EC:2.7.11.-]
K02515 HSL1; serine/threonine-protein kinase HSL1, negative regulator of Swe1 kinase [EC:2.7.11.-]
K19852 KIN1_2; serine/threonine protein kinase KIN1/2 [EC:2.7.11.1]
K00871 PHKG; phosphorylase kinase gamma subunit [EC:2.7.11.19]
K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
K02218 CSNK1; casein kinase 1 [EC:2.7.11.1]
K02218 CSNK1; casein kinase 1 [EC:2.7.11.1]
K14758 HRR25; casein kinase I homolog HRR25 [EC:2.7.11.1]
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
K15562 BUR1; serine/threonine-protein kinase BUR1 [EC:2.7.11.22 2.7.11.23]
K00916 CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23]
K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24]
K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24]
K04464 MAPK7; mitogen-activated protein kinase 7 [EC:2.7.11.24]
K04441 P38; p38 MAP kinase [EC:2.7.11.24]
K08293 SMK1; sporulation-specific mitogen-activated protein kinase SMK1 [EC:2.7.11.24]
K03083 GSK3B; glycogen synthase kinase 3 beta [EC:2.7.11.26]
K18670 YAK1; dual specificity protein kinase YAK1 [EC:2.7.12.1]
K18670 YAK1; dual specificity protein kinase YAK1 [EC:2.7.12.1]
K12765 IME2; meiosis induction protein kinase IME2/SME1 [EC:2.7.11.1]
K08832 SRPK3; serine/threonine-protein kinase SRPK3 [EC:2.7.11.1]
K08294 MKK1_2; mitogen-activated protein kinase kinase [EC:2.7.12.2]
K11226 STE7; mitogen-activated protein kinase kinase [EC:2.7.12.2]
K11227 PBS2; mitogen-activated protein kinase kinase [EC:2.7.12.2]
K04409 PAK1; p21-activated kinase 1 [EC:2.7.11.1]
K19833 CLA4; serine/threonine-protein kinase CLA4 [EC:2.7.11.1]
K12771 SPS1; sporulation-specific protein 1 [EC:2.7.11.1]
K11228 STE11; mitogen-activated protein kinase kinase kinase [EC:2.7.11.25]
K11229 BCK1; mitogen-activated protein kinase kinase kinase [EC:2.7.11.25]
K11230 SSK2; mitogen-activated protein kinase kinase kinase [EC:2.7.11.25]
K02178 BUB1; checkpoint serine/threonine-protein kinase [EC:2.7.11.1]
K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
K02214 CDC7; cell division control protein 7 [EC:2.7.11.1]
K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
K08852 ERN1; serine/threonine-protein kinase/endoribonuclease IRE1 [EC:2.7.11.1 3.1.26.-]
K08853 AAK; AP2-associated kinase [EC:2.7.11.1]
K08856 STK16; serine/threonine kinase 16 [EC:2.7.11.1]
K20872 NEK2; NIMA (never in mitosis gene a)-related kinase 2 [EC:2.7.11.1]
K16196 EIF2AK4; eukaryotic translation initiation factor 2-alpha kinase 4 [EC:2.7.11.1]
K08876 SCYL1; SCY1-like protein 1
K17541 SCYL2; SCY1-like protein 2
K08866 TTK; serine/threonine-protein kinase TTK/MPS1 [EC:2.7.12.1]
K08269 ULK2; serine/threonine-protein kinase ULK2 [EC:2.7.11.1]
K08333 PIK3R4; phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
K08869 ADCK; aarF domain-containing kinase
K08869 ADCK; aarF domain-containing kinase
K08869 ADCK; aarF domain-containing kinase
K08869 ADCK; aarF domain-containing kinase
K00898 PDK2_3_4; pyruvate dehydrogenase kinase 2/3/4 [EC:2.7.11.2]
K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1]
K08874 TRRAP; transformation/transcription domain-associated protein
K08874 TRRAP; transformation/transcription domain-associated protein
K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
K21157 SAK1; SNF1-activating kinase 1 [EC:2.7.11.1]
K22009 MCK1; protein kinase MCK1
K11231 SLN1; osomolarity two-component system, sensor histidine kinase SLN1 [EC:2.7.13.3]
K19691 NIK1; osomolarity two-component system, sensor histidine kinase NIK1 [EC:2.7.13.3]
     01009 Protein phosphatases and associated proteins [BR:pic01009]
     01002 Peptidases and inhibitors [BR:pic01002]
     01003 Glycosyltransferases [BR:pic01003]
     01005 Lipopolysaccharide biosynthesis proteins
     01011 Peptidoglycan biosynthesis and degradation proteins
     01004 Lipid biosynthesis proteins [BR:pic01004]
     01008 Polyketide biosynthesis proteins
     01006 Prenyltransferases [BR:pic01006]
     01007 Amino acid related enzymes [BR:pic01007]
     00199 Cytochrome P450 [BR:pic00199]
     00194 Photosynthesis proteins
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:pic03000]
     03021 Transcription machinery [BR:pic03021]
     03019 Messenger RNA biogenesis [BR:pic03019]
     03041 Spliceosome [BR:pic03041]
     03011 Ribosome [BR:pic03011]
     03009 Ribosome biogenesis [BR:pic03009]
     03016 Transfer RNA biogenesis [BR:pic03016]
     03012 Translation factors [BR:pic03012]
     03110 Chaperones and folding catalysts [BR:pic03110]
     04131 Membrane trafficking [BR:pic04131]
     04121 Ubiquitin system [BR:pic04121]
     03051 Proteasome [BR:pic03051]
     03032 DNA replication proteins [BR:pic03032]
       PICST_62569 ORC1; Origin recognition complex, subunit 1
       PICST_60622 ORC2; Origin recognition complex subunit 2 (Origin recognition complex protein 71 kDa subunit)
       PICST_54331 predicted protein
       PICST_59958 predicted protein
       PICST_54065 predicted protein
       PICST_62776 predicted protein
       PICST_29170 CDC6; cell cycle control protein
       PICST_85790 MCM2; DNA replication licensing factor, MCM2 component (Minichromosome maintenance protein 2)
       PICST_71636 MCM3; member of complex that acts at ARS's to initiate replication
       PICST_75184 MCM4; DNA replication licensing factor, MCM4 component
       PICST_59868 MCM5; DNA replication licensing factor, MCM5 component
       PICST_70932 MCM6; DNA replication licensing factor, MCM6 component
       PICST_83251 MCM7; DNA helicase and DNA replication licensing factor (CDC47)
       PICST_38480 serine/threonine kinase
       PICST_33040 regulator of Cdc7 kinase
       PICST_47082 DNA replication complex GINS protein PSF1
       PICST_28425 PSF2; subunit of GINS complex required for chromosomal DNA replication
       PICST_34728 predicted protein
       PICST_83141 DPB11; DNA polymerase II complex component
       PICST_44021 predicted protein
       PICST_30184 predicted protein
       PICST_57349 DNA replication initiation
       PICST_57882 DNA43; required for S-phase initiation or completion (MCM10)
       PICST_86981 POL1; DNA-directed DNA polymerase alpha Required for mitotic DNA synthesis, premeiotic DNA synthesis, recombination, and full sporulation
       PICST_90280 POL12; DNA polymerase alpha-primase complex B subunit
       PICST_55030 PRI1; p48 polypeptide of DNA primase
       PICST_34043 PRI2; DNA-directed DNA polymerase alpha, DNA primase subunit
       PICST_66970 POL2; DNA-directed DNA polymerase epsilon, catalytic subunit A
       PICST_74461 DPB2; DNA-directed DNA polymerase epsilon, subunit B
       PICST_34779 predicted protein
       PICST_30658 DPB3; DNA-directed DNA polymerase epsilon, subunit C
       PICST_63206 DPOD; DNA polymerase delta catalytic subunit (DNA polymerase III)
       PICST_40682 HYS2; DNA polymerase delta small subunit (Hydroxyurea sensitive protein HYS2)
       PICST_52157 predicted protein
       PICST_14247 MIP1; mitochondrial DNA polymerase catalytic subunit
       PICST_81646 RFA1; DNA replication factor A
       PICST_47651 predicted protein
       PICST_63063 predicted protein
       PICST_35815 predicted protein
       PICST_72583 RCF2; Replication factor C, subunit RFC4
       PICST_39313 RFC4; DNA replication factor C
       PICST_60537 RCF3; DNA replication factor C
       PICST_76038 RCF5; DNA replicationn factor C
       PICST_84962 ribonuclease H
       PICST_31007 predicted protein
       PICST_31465 predicted protein
       PICST_80864 POL30; DNA polymerase delta processivity factor (proliferating cell nuclear antigen)
       PICST_61353 predicted protein
       PICST_33791 Exodeoxyribonuclease
       PICST_33450 EXO1; 5'-3' exonuclease
       PICST_56005 ATP dependent DNA ligase
       PICST_28386 RIF1; RAP1-interacting factor, involved in establishment of repressed chromatin
       PICST_2658 SIR2; NAD-dependent histone deacetylase
       PICST_40594 SIR3; NAD-dependent histone deacetylase SIR2 (Regulatory protein SIR2) (Silent information regulator 2)
       PICST_32025 HST2; putative histone deacetylase-like protein
       PICST_49645 HST3; NAD-dependent deacetylase HST3 (Homologous to SIR2 protein 3)
       PICST_67919 RAP1; DNA-binding protein
       PICST_75322 GAR1; H/ACA small nucleolar RNP component GAR1
       PICST_79967 ribosomal protein L7AE
       PICST_49236 NOP10; H/ACA ribonucleoprotein complex subunit 3 (Nucleolar protein family A member 3) (snoRNP protein NOP10)
       PICST_64832 CBF5; nucleolar pseuduridine synthase and putative microtubule binding protein
       PICST_81589 predicted protein
       PICST_55452 predicted protein
       PICST_32971 predicted protein
       PICST_60825 predicted protein
       PICST_13887 predicted protein
       PICST_47366 predicted protein
       PICST_46368 predicted protein
       PICST_53814 predicted protein
       PICST_32483 double-strand break repair protein MRE11
       PICST_53629 RAD50; DNA repair protein
       PICST_59212 TEL1; phosphatidylinositol kinase
       PICST_47969 SGS1; ATP-dependent DNA helicase
       PICST_60166 DNA repair protein
       PICST_64548 predicted protein
       PICST_47348 predicted protein
       PICST_46944 TOP1; DNA topoisomerase I
       PICST_74317 TOP2; DNA topoisomerase II
       PICST_34564 TOP3; DNA topoisomerase
K02603 ORC1; origin recognition complex subunit 1
K02604 ORC2; origin recognition complex subunit 2
K02605 ORC3; origin recognition complex subunit 3
K02606 ORC4; origin recognition complex subunit 4
K02607 ORC5; origin recognition complex subunit 5
K02608 ORC6; origin recognition complex subunit 6
K02213 CDC6; cell division control protein 6
K02540 MCM2; DNA replication licensing factor MCM2 [EC:3.6.4.12]
K02541 MCM3; DNA replication licensing factor MCM3 [EC:3.6.4.12]
K02212 MCM4; DNA replication licensing factor MCM4 [EC:3.6.4.12]
K02209 MCM5; DNA replication licensing factor MCM5 [EC:3.6.4.12]
K02542 MCM6; DNA replication licensing factor MCM6 [EC:3.6.4.12]
K02210 MCM7; DNA replication licensing factor MCM7 [EC:3.6.4.12]
K02214 CDC7; cell division control protein 7 [EC:2.7.11.1]
K02309 DBF4; regulatory subunit for Cdc7p protein kinase
K10732 GINS1; GINS complex subunit 1
K10733 GINS2; GINS complex subunit 2
K10735 GINS4; GINS complex subunit 4
K03507 DPB11; DNA replication regulator DPB11
K10729 SLD2; DNA replication regulator SLD2
K10731 SLD3; DNA replication regulator SLD3
K06628 CDC45; cell division control protein 45
K10736 MCM10; minichromosome maintenance protein 10
K02320 POLA1; DNA polymerase alpha subunit A [EC:2.7.7.7]
K02321 POLA2; DNA polymerase alpha subunit B
K02684 PRI1; DNA primase small subunit [EC:2.7.7.102]
K02685 PRI2; DNA primase large subunit
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03504 POLD3; DNA polymerase delta subunit 3
K02332 POLG; DNA polymerase gamma 1 [EC:2.7.7.7]
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10740 RPA3; replication factor A3
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K10743 RNASEH2A; ribonuclease H2 subunit A [EC:3.1.26.4]
K10745 RNASEH2C; ribonuclease H2 subunit C
K04802 PCNA; proliferating cell nuclear antigen
K19783 HCS1; DNA polymerase alpha-associated DNA helicase A [EC:3.6.4.12]
K04799 FEN1; flap endonuclease-1 [EC:3.-.-.-]
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K11118 RIF1; RAP1-interacting factor 1
K11121 SIR2; NAD+-dependent protein deacetylase SIR2 [EC:2.3.1.286]
K11121 SIR2; NAD+-dependent protein deacetylase SIR2 [EC:2.3.1.286]
K11121 SIR2; NAD+-dependent protein deacetylase SIR2 [EC:2.3.1.286]
K11121 SIR2; NAD+-dependent protein deacetylase SIR2 [EC:2.3.1.286]
K09426 RAP1; Myb-like DNA-binding protein RAP1
K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
K11132 EST1; telomere elongation protein [EC:2.7.7.-]
K11133 EST3; telomere replication protein
K11086 SNRPB; small nuclear ribonucleoprotein B and B'
K11096 SNRPD2; small nuclear ribonucleoprotein D2
K11088 SNRPD3; small nuclear ribonucleoprotein D3
K11097 SNRPE; small nuclear ribonucleoprotein E
K11098 SNRPF; small nuclear ribonucleoprotein F
K11134 ELG1; telomere length regulation protein
K10865 MRE11; double-strand break repair protein MRE11
K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
K10901 BLM; bloom syndrome protein [EC:3.6.4.12]
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K11137 TELO2; telomere length regulation protein
K22485 TBF1; protein TBF1
K03163 TOP1; DNA topoisomerase I [EC:5.6.2.1]
K03164 TOP2; DNA topoisomerase II [EC:5.6.2.2]
K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
     03036 Chromosome and associated proteins [BR:pic03036]
     03400 DNA repair and recombination proteins [BR:pic03400]
       PICST_49425 O6-methylguanine DNA repair methyltransferase
       PICST_42190 predicted protein
       PICST_55251 predicted protein
       PICST_35111 OGG1; 8-oxoguanine DNA glycosylase
       PICST_30250 NTG2; Endonuclease III
       PICST_30161 predicted protein
       PICST_28317 APN2; AP endonuclease
       PICST_63206 DPOD; DNA polymerase delta catalytic subunit (DNA polymerase III)
       PICST_40682 HYS2; DNA polymerase delta small subunit (Hydroxyurea sensitive protein HYS2)
       PICST_52157 predicted protein
       PICST_66970 POL2; DNA-directed DNA polymerase epsilon, catalytic subunit A
       PICST_74461 DPB2; DNA-directed DNA polymerase epsilon, subunit B
       PICST_34779 predicted protein
       PICST_30658 DPB3; DNA-directed DNA polymerase epsilon, subunit C
       PICST_80864 POL30; DNA polymerase delta processivity factor (proliferating cell nuclear antigen)
       PICST_33791 Exodeoxyribonuclease
       PICST_56005 ATP dependent DNA ligase
       PICST_67678 putative tyrosyl-DNA phosphodiesterase
       PICST_33883 HNT3; histidine triad superfamily, third branch
       PICST_44837 TPP1; Three Prime Phosphatase 1 Polynucleotide kinase 3' phosphatase
       PICST_24555 predicted protein
       PICST_82779 RAD23; nucleotide excision repair protein (ubiquitin-like protein)
       PICST_37145 HRT1; Skp1 Cullin-F-box ubiquitin protein ligase (SCF) subunit
       PICST_80515 CUL4; cullin, ubiquitin ligase activity
       PICST_2329 RAD7; nucleotide excision repair protein
       PICST_49179 RAD16; nucleotide excision repair protein
       PICST_75374 RPO21; DNA-directed RNA polymerase II largest subunit (RNA polymerase II subunit 1) (B220)
       PICST_34146 RPB140; DNA-dependent RNA polymerase II
       PICST_80709 RPB3; 45 kDa subunit of RNA polymerase II
       PICST_58607 RPB4; RNA polymerase II fourth largest subunit
       PICST_53602 RPB5; DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase II subunit 5)
       PICST_60409 RPO26; subunit common to RNA polymerases I, II, and III
       PICST_28240 RPB7; RNA polymerase II subunit
       PICST_87046 RPB8; 16-kDa RNA polymerase subunit (common to polymerases I, II and III)
       PICST_61635 RPB9; DNA-directed RNA polymerase II
       PICST_37912 RPB10; DNA-directed RNA Polymerase II subunit L
       PICST_62535 RBP11; RNA polymerase II core subunit
       PICST_37319 RPC10; DNA-directed RNA polymerases small subunit
       PICST_31740 WD repeat protein
       PICST_56808 RAD26; DNA dependent ATPase
       PICST_82790 SSL2; DNA helicase
       PICST_50344 RAD3; DNA helicase component of transcription factor b
       PICST_49623 TFB1; RNA polymerase II transcription factor B 73 kDa subunit
       PICST_29472 component of RNA polymerase transcription factor
       PICST_83789 predicted protein
       PICST_29855 TFB2; RNA polymerase II transcription factor B subunit 2 (RNA polymerase II transcription factor B p52 subunit) (RNA polymerase II transcription factor B 52 kDa subunit)
       PICST_54142 KIN28; serine-threonine kinase, subunit of RNA Pol TFIIK
       PICST_82497 predicted protein
       PICST_49633 TFB3; RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B p38 subunit) (RNA polymerase II transcription factor B 38 kDa subunit)
       PICST_81646 RFA1; DNA replication factor A
       PICST_47651 predicted protein
       PICST_63063 predicted protein
       PICST_42547 RAD14; Zn-binding nucleotide exision repairosome
       PICST_28360 RAD10; ssDNA endonuclease and repair protein
       PICST_60166 DNA repair protein
       PICST_35911 predicted protein
       PICST_54238 predicted protein
       PICST_51711 predicted protein
       PICST_62848 predicted protein
       PICST_48306 predicted protein
       PICST_68406 predicted protein
       PICST_59113 predicted protein
       PICST_81012 MSH6; Mismatch repair ATPase MSH6 (MutS family)
       PICST_89086 predicted protein
       PICST_51649 MLH3; DNA mismatch repair
       PICST_35815 predicted protein
       PICST_72583 RCF2; Replication factor C, subunit RFC4
       PICST_39313 RFC4; DNA replication factor C
       PICST_60537 RCF3; DNA replication factor C
       PICST_76038 RCF5; DNA replicationn factor C
       PICST_33450 EXO1; 5'-3' exonuclease
       PICST_32483 double-strand break repair protein MRE11
       PICST_53629 RAD50; DNA repair protein
       PICST_58642 DNA-repair
       PICST_66275 RAD59; protein involved in mitotic recombination and DNA repair
       PICST_53653 RAD54; protein required for X-ray damage repair, mitotic recombination, and full meiotic recombination. mRNA increases in meiosis
       PICST_15102 RDH54; helicase
       PICST_47969 SGS1; ATP-dependent DNA helicase
       PICST_34564 TOP3; DNA topoisomerase
       PICST_46211 predicted protein
       PICST_50823 MCO15; serine/threonine protein phosphatase
       PICST_30460 SMC5; structural maintenance of chromosomes protein
       PICST_31021 RHC18; Protein involved in recombination repair
       PICST_54896 predicted protein
       PICST_56107 predicted protein
       PICST_58773 predicted protein
       PICST_83402 predicted protein
       PICST_53391 predicted protein
       PICST_61121 endonuclease
       PICST_34019 predicted protein
       PICST_31531 predicted protein
       PICST_32328 predicted protein
       PICST_90954 predicted protein
       PICST_28599 predicted protein
       PICST_33639 predicted protein
       PICST_58832 weak suppressor of smt3
       PICST_86369 SAP11; member of the AAA ATPase family of proteins
       PICST_65019 Ku family DNA binding and repair protein
       PICST_67185 Ku80 protein
       PICST_81859 DNL1; DNA ligase IV
       PICST_64548 predicted protein
       PICST_41858 RAD30; DNA polymerase eta subunit
       PICST_28877 REV1; DNA repair protein
       PICST_42338 REV3; DNA polymerase zeta
       PICST_35960 hypothetical protein
       PICST_47790 ubiquitin-protein ligase
       PICST_31983 RAD18; DNA repair protein and ATPase
       PICST_82083 RAD5; ATPase/DNA helicase
       PICST_34709 MMS2; Ubiquitin-conjugating enzyme variant MMS2 (UEV MMS2)
       PICST_68363 predicted protein
       PICST_37773 HRT2; Ty3 transposition effector
       PICST_28605 predicted protein
       PICST_32319 predicted protein
       PICST_59119 DNA damage checkpoint protein
       PICST_88189 topoisomerase I interacting factor
       PICST_30659 predicted protein
       PICST_33473 predicted protein
       PICST_67811 predicted protein
       PICST_59212 TEL1; phosphatidylinositol kinase
       PICST_33177 CHK1; checkpoint kinase 1
       PICST_29649 protein kinase
       PICST_84881 BMH1; Multifunctional chaperone (14-3-3 family) Posttranslational modification, protein turnover
       PICST_41175 Calcium/calmodulin-dependent protein kinase
       PICST_32199 predicted protein
       PICST_32127 MEC1; cell cycle checkpoint protein
       PICST_44970 AMN1; Antagonist of MEN (Mitotic Exit Network)
       PICST_56859 POL5; DNA polymerase V that has motifs typical of DNA polymerase family
       PICST_64329 DEM1; conserved hypothetical protein, mitochondrial
       PICST_85107 predicted protein
       PICST_35246 Pre-mRNA splicing factor CEF1
       PICST_56432 predicted protein
       PICST_36667 predicted protein
       PICST_69362 DUT1; Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (dUTP pyrophosphatase)
       PICST_75662 RNR1.2; Ribonucleoside-diphosphate reductase large chain 1
       PICST_29856 RNR1.1; ribonucleoside-diphosphate reductase alpha subunit
       PICST_70259 RNR2; small subunit of ribonucleotide reductase
       PICST_58778 MAG1; 3-methyladenine DNA glycosylase
       PICST_84240 predicted protein
       PICST_51012 HPR5; protein required for proper timing of committment to meiotic recombination and the transition from Meiosis I to Meiosis II
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K10771 APEX1; AP endonuclease 1 [EC:4.2.99.18]
K10772 APEX2; AP endonuclease 2 [EC:4.2.99.18]
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03504 POLD3; DNA polymerase delta subunit 3
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.-.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
K10863 APTX; aprataxin [EC:3.1.11.7 3.1.11.8 3.1.12.2]
K08075 E3.1.3.32; polynucleotide 3'-phosphatase [EC:3.1.3.32]
K10838 XPC; xeroderma pigmentosum group C-complementing protein
K10839 RAD23; UV excision repair protein RAD23
K03868 RBX1; RING-box protein 1 [EC:2.3.2.32]
K10609 CUL4; cullin 4
K15082 RAD7; DNA repair protein RAD7
K15083 RAD16; DNA repair protein RAD16
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
K03013 RPB5; DNA-directed RNA polymerases I, II, and III subunit RPABC1
K03014 RPB6; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
K03016 RPB8; DNA-directed RNA polymerases I, II, and III subunit RPABC3
K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
K03007 RPB10; DNA-directed RNA polymerases I, II, and III subunit RPABC5
K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
K03009 RPB12; DNA-directed RNA polymerases I, II, and III subunit RPABC4
K10570 ERCC8; DNA excision repair protein ERCC-8
K10841 ERCC6; DNA excision repair protein ERCC-6
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:3.6.4.12]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:3.6.4.12]
K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K06634 CCNH; cyclin H
K10842 MNAT1; CDK-activating kinase assembly factor MAT1
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10740 RPA3; replication factor A3
K10847 XPA; DNA-repair protein complementing XP-A cells
K10849 ERCC1; DNA excision repair protein ERCC-1
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10846 ERCC5; DNA excision repair protein ERCC-5
K15075 MET18; DNA repair/transcription protein MET18/MMS19
K03869 CUL3; cullin 3
K03872 ELOC; elongin-C
K15077 ELA1; elongin-A
K08735 MSH2; DNA mismatch repair protein MSH2
K08736 MSH3; DNA mismatch repair protein MSH3
K08737 MSH6; DNA mismatch repair protein MSH6
K08734 MLH1; DNA mismatch repair protein MLH1
K08739 MLH3; DNA mismatch repair protein MLH3
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K10865 MRE11; double-strand break repair protein MRE11
K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
K10958 RAD57; DNA repair protein RAD57
K10959 RAD59; DNA repair protein RAD59
K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-]
K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:3.6.4.-]
K10901 BLM; bloom syndrome protein [EC:3.6.4.12]
K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
K15364 NCE4; RecQ-mediated genome instability protein 1
K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
K22803 SMC5; structural maintenance of chromosomes protein 5
K22804 SMC6; structural maintenance of chromosomes protein 6
K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
K22823 NSMCE3; non-structural maintenance of chromosomes element 3
K22825 NSMCE4; non-structural maintenance of chromosomes element 4
K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:3.6.4.12]
K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
K10881 SHFM1; 26 proteasome complex subunit DSS1
K10878 SPO11; meiotic recombination protein SPO11
K10998 CSM3; replication fork protection complex subunit Csm3/Swi3
K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
K15079 SLX4; structure-specific endonuclease subunit SLX4
K15339 YEN1; holliday junction resolvase YEN1 [EC:3.1.-.-]
K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
K22766 FIGNL1; fidgetin-like protein 1 [EC:3.6.4.-]
K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
K11137 TELO2; telomere length regulation protein
K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
K03508 POLZ2; DNA polymerase zeta [EC:2.7.7.7]
K10574 UBE2B; ubiquitin-conjugating enzyme E2 B [EC:2.3.2.23]
K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
K15505 RAD5; DNA repair protein RAD5 [EC:3.6.4.-]
K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
K23114 ARMT1; protein-glutamate O-methyltransferase [EC:2.1.1.-]
K06662 HRAD17; cell cycle checkpoint protein
K02544 MEC3; G2-specific checkpoint protein
K06663 DDC1; DNA damage checkpoint protein
K10997 TOF1; replication fork protection complex subunit Tof1/Swi1
K20403 TTI1; TELO2-interacting protein 1
K23388 UBL4A; ubiquitin-like protein 4A
K23387 GET4; golgi to ER traffic protein 4
K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
K06630 YWHAE; 14-3-3 protein epsilon
K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-]
K06661 RAD9; DNA repair protein RAD9
K02543 MEC1; cell cycle checkpoint protein MEC1
K15081 AMN1; antagonist of mitotic exit network protein 1
K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
K17815 EXO5; exonuclease V [EC:3.1.-.-]
K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
K12862 PLRG1; pleiotropic regulator 1
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
     03029 Mitochondrial biogenesis [BR:pic03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

[ KO | BRITE | KEGG2 | KEGG ]
Last updated: August 19, 2019