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09100 Metabolism
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09120 Genetic Information Processing
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:plu03000]
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03021 Transcription machinery [BR:plu03021]
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03019 Messenger RNA biogenesis [BR:plu03019]
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03041 Spliceosome
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03011 Ribosome [BR:plu03011]
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03009 Ribosome biogenesis [BR:plu03009]
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plu3340 rnc; ribonuclease III (RNase III)
plu4595 orn; oligoribonuclease
plu3339 era; GTP-binding protein era
plu4540 unnamed protein product; Highly similar to hypothetical GTP-binding protein YhbZ of Escherichia coli
plu0876 dksA; DnaK suppressor protein
plu4530 nusA; N utilization substance protein A (nusA protein) (L factor)
plu3897 nusB; N utilization substance protein B
plu0434 nusG; transcription antitermination factor
plu2867 rsuA; ribosomal small subunit pseudouridine synthase A (16S pseudouridylate 516 synthase) (16S pseudouridine 516 synthase) (uracil hydrolyase)
plu0609 ksgA; S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase
plu4697 rsmB; RsmB protein (SUN/FMU protein), 16S RNA m5C967 methyltransferase
plu4252 rsmC; ribosomal RNA small subunit methyltransferase C (rRNA (guanine-N2-)-methyltransferase) (16S rRNA m2G1207 methyltransferase)
plu4105 unnamed protein product; Highly similar to putative methylase YhhF of Escherichia coli
plu1185 unnamed protein product; Highly similar to unknown protein YggJ of Escherichia coli
plu0048 gidB; Glucose inhibited division protein B
plu3662 mraW; S-adenosyl-methyltransferase MraW
plu4001 unnamed protein product; Highly similar to unknown protein YraL of Escherichia coli
plu0123 unnamed protein product; Highly similar to unknown protein YhiQ of Escherichia coli
plu2702 rrmA; ribosomal RNA large subunit methyltransferase A
plu4574 unnamed protein product; Highly similar to hypothetical tRNA/rRNA methyltransferase YjfH of Escherichia coli
plu4536 rrmJ; Ribosomal RNA large subunit methyltransferase J (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) (Cell division protein FtsJ)
plu1298 unnamed protein product; Highly similar to unknown protein YbeA of Escherichia coli
plu0374 unnamed protein product; Highly similar to unknown protein YhiR of Escherichia coli
plu1764 unnamed protein product; Highly similar to putative oxidoreductase YcbY of Escherichia coli
plu0654 unnamed protein product; Highly similar to unknown protein YgdE of Escherichia coli
plu1373 unnamed protein product; Highly similar to unknown protein YfgB of Escherichia coli
plu0909 rumA; 23S rRNA (Uracil-5-)-methyltransferase rumA (23S rRNA(M-5-U1939)-methyltransferase)
plu1584 unnamed protein product; Highly similar to probable RNA methyltransferase YbjF of Escherichia coli
plu0614 rluA; ribosomal large subunit pseudouridine synthase A (pseudouridylate synthase) (uracil hydrolyase)
plu2452 unnamed protein product; Highly similar to probable pseudouridylate synthase YciL of Escherichia coli
plu2840 rluC; ribosomal large subunit pseudouridine synthase C (pseudouridylate synthase) (uracil hydrolyase)
plu1268 rluD; ribosomal large subunit pseudouridine synthase D (pseudouridylate synthase) (uracil hydrolyase)
plu2802 unnamed protein product; Highly similar to probable pseudouridylate synthase YmfC of Escherichia coli
plu1274 unnamed protein product; Highly similar to putative tRNA/rRNA methyltransferase YfiF Escherichia coli
plu4250 rimI; ribosomal-protein-alanine acetyltransferase (acetylating enzyme for N-terminal of ribosomal protein S18)
plu2090 rimJ; Ribosomal-protein-alanine acetyltransferase (Acetylating enzyme for N-terminal of ribosomal protein S5)
plu1258 rimM; 16S rRNA processing protein
plu1615 unnamed protein product; Similar to unknown protein YcaO of Escherichia coli
plu4087 prmA; ribosomal protein L11 methyltransferase
plu3190 unnamed protein product; Similar to hypothetical adenine-specific methylase YfcB of Escherichia coli
plu2809 unnamed protein product; Highly similar to unknown protein YcfD of Escherichia coli
plu2841 rne; ribonuclease E (RNase E)
plu4067 cafA; ribonuclease G (RNase G) (cytoplasmic axial filament protein)
plu1182 unnamed protein product; Highly similar to unknown protein YqgF of Escherichia coli
plu4523 deaD; inducible ATP-independent RNA helicase
plu3349 srmB; ATP-dependent RNA helicase
plu4596 unnamed protein product; Highly similar to unknown protein YjeQ of Escherichia coli
plu1380 engA; GTP-binding protein EngA
plu4580 hflX; GTP-binding protein
plu4692 unnamed protein product; Highly similar to unknown protein YrdC of Escherichia coli
plu0272 spoT; guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase ((ppGpp)ase) (penta-phosphate guanosine-3'-pyrophosphohydrolase)
plu4528 rbfA; ribosome-binding factor A (fragment)
plu4531 unnamed protein product; Highly similar to unknown protein YhbC Escherichia coli
plu4316 unnamed protein product; Similar to unknown protein YbcJ of Escherichia coli
plu1299 unnamed protein product; Highly similar to unknown protein YbeB of Escherichia coli
plu1310 unnamed protein product; Highly similar to unknown protein YbeY of Escherichia coli
plu4537 unnamed protein product; Highly similar to unknown protein YhbY of Escherichia coli
plu4061 unnamed protein product; Highly similar to unknown protein YjgA of Escherichia coli
plu1769 rmf; ribosome modulation factor (protein E)
plu4042 unnamed protein product; Highly similar to probable sigma(54) modulation protein YhbH of Escherichia coli
plu1266 unnamed protein product; Highly similar to probable sigma-54 modulation protein YfiA of Escherichia coli
plu2054 unnamed protein product; Highly similar to probable GTP-binding protein YchF of Escherichia coli
plu2838 unnamed protein product; Highly similar to probable membrane protein YceD of Escherichia coli
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K03685 rnc; ribonuclease III [EC:3.1.26.3]
K13288 orn; oligoribonuclease [EC:3.1.-.-]
K03595 era; GTPase
K03979 obgE; GTPase [EC:3.6.5.-]
K06204 dksA; RNA polymerase-binding transcription factor
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
K02860 rimM; 16S rRNA processing protein RimM
K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
K08300 rne; ribonuclease E [EC:3.1.26.12]
K08301 rng; ribonuclease G [EC:3.1.26.-]
K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
K03977 engA; GTPase
K03665 hflX; GTPase
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
K02834 rbfA; ribosome-binding factor A
K09748 rimP; ribosome maturation factor RimP
K14761 rlbA; ribosome-associated protein
K09710 ybeB; ribosome-associated protein
K07042 ybeY; probable rRNA maturation factor
K07574 yhbY; RNA-binding protein
K09889 yjgA; ribosome-associated protein
K03812 rmf; ribosome modulation factor
K05808 hpf; ribosome hibernation promoting factor
K05809 raiA; ribosome-associated inhibitor A
K06942 ychF; ribosome-binding ATPase
K07040 yceD; DUF177 domain-containing protein
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03016 Transfer RNA biogenesis [BR:plu03016]
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03012 Translation factors [BR:plu03012]
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03110 Chaperones and folding catalysts [BR:plu03110]
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04131 Membrane trafficking [BR:plu04131]
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04121 Ubiquitin system [BR:plu04121]
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03051 Proteasome [BR:plu03051]
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03032 DNA replication proteins [BR:plu03032]
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03036 Chromosome and associated proteins [BR:plu03036]
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03400 DNA repair and recombination proteins [BR:plu03400]
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03029 Mitochondrial biogenesis [BR:plu03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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