KEGG Orthology (KO) - Papilio machaon (common yellow swallowtail)

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:pmac03030]
     03410 Base excision repair [PATH:pmac03410]
     03420 Nucleotide excision repair [PATH:pmac03420]
       106708735 RING-box protein 1A
       106715992 cullin-4B
       106707906 DNA damage-binding protein 1
       106708592 DNA repair protein complementing XP-C cells homolog
       106710735 UV excision repair protein RAD23 homolog A
       106713792 calmodulin-2-like isoform X1
       106709396 caltractin-like
       106718062 DNA excision repair protein ERCC-6-like
       106709044 DNA-directed RNA polymerase II subunit RPB1
       106715190 uncharacterized protein LOC106715190
       106713319 DNA-directed RNA polymerase II subunit RPB2
       106721559 DNA-directed RNA polymerase II subunit RPB3
       106717879 DNA-directed RNA polymerase II 16 kDa polypeptide
       106716578 DNA-directed RNA polymerases I, II, and III subunit RPABC1
       106715448 DNA-directed RNA polymerases I, II, and III subunit RPABC2
       106712065 DNA-directed RNA polymerase II subunit RPB7
       106713416 DNA-directed RNA polymerases I, II, and III subunit RPABC3
       106711998 DNA-directed RNA polymerase II subunit RPB9
       106715327 DNA-directed RNA polymerases I, II, and III subunit RPABC5
       106717598 DNA-directed RNA polymerases I, II, and III subunit RPABC4
       106720146 DNA-directed RNA polymerase II subunit RPB11
       106720680 DNA-directed RNA polymerase II subunit GRINL1A
       106710061 cyclin-dependent kinase 7
       106716327 CDK-activating kinase assembly factor MAT1
       106710347 cyclin-H
       106719182 LOW QUALITY PROTEIN: DNA excision repair protein haywire
       106714653 TFIIH basal transcription factor complex helicase XPD subunit
       106720940 general transcription factor IIH subunit 5
       106715383 general transcription factor IIH subunit 1
       106710527 general transcription factor IIH subunit 2
       106720512 general transcription factor IIH subunit 3
       106718856 general transcription factor IIH subunit 4
       106718842 DNA repair protein complementing XP-G cells
       106710903 DNA repair protein complementing XP-A cells homolog
       106710569 replication protein A 70 kDa DNA-binding subunit isoform X1
       106717820 replication protein A 32 kDa subunit
       106714043 DNA repair endonuclease XPF
       106720591 mating-type switching protein swi10
       106718556 DNA polymerase delta catalytic subunit
       106714987 DNA polymerase delta subunit 2-like
       106714989 DNA polymerase delta small subunit-like
       106711870 DNA polymerase delta subunit 3-like
       106712041 LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A
       106713272 DNA polymerase epsilon subunit 2
       106708081 DNA polymerase epsilon subunit 3
       106721347 DNA polymerase epsilon subunit 4
       106709885 proliferating cell nuclear antigen
       106707801 replication factor C subunit 1-like
       106712349 replication factor C subunit 4
       106715119 replication factor C subunit 2
       106719669 replication factor C subunit 3
       106717727 replication factor C subunit 5
       106716423 DNA ligase 1
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K10609 CUL4; cullin 4
K10610 DDB1; DNA damage-binding protein 1
K10838 XPC; xeroderma pigmentosum group C-complementing protein
K10839 RAD23; UV excision repair protein RAD23
K10840 CETN2; centrin-2
K10840 CETN2; centrin-2
K10841 ERCC6; DNA excision repair protein ERCC-6
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K10842 MNAT1; CDK-activating kinase assembly factor MAT1
K06634 CCNH; cyclin H
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
K10846 ERCC5; DNA excision repair protein ERCC-5
K10847 XPA; DNA-repair protein complementing XP-A cells
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10849 ERCC1; DNA excision repair protein ERCC-1
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K02328 POLD2; DNA polymerase delta subunit 2
K03504 POLD3; DNA polymerase delta subunit 3
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
K04802 PCNA; proliferating cell nuclear antigen
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
     03430 Mismatch repair [PATH:pmac03430]
     03440 Homologous recombination [PATH:pmac03440]
     03450 Non-homologous end-joining [PATH:pmac03450]
     03460 Fanconi anemia pathway [PATH:pmac03460]
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:pmac03000]
     03021 Transcription machinery [BR:pmac03021]
     03019 Messenger RNA biogenesis [BR:pmac03019]
     03041 Spliceosome [BR:pmac03041]
     03011 Ribosome [BR:pmac03011]
     03009 Ribosome biogenesis [BR:pmac03009]
     03016 Transfer RNA biogenesis [BR:pmac03016]
     03012 Translation factors [BR:pmac03012]
     03110 Chaperones and folding catalysts [BR:pmac03110]
     04131 Membrane trafficking [BR:pmac04131]
     04121 Ubiquitin system [BR:pmac04121]
     03051 Proteasome [BR:pmac03051]
     03032 DNA replication proteins [BR:pmac03032]
     03036 Chromosome and associated proteins [BR:pmac03036]
     03400 DNA repair and recombination proteins [BR:pmac03400]
       106718993 alpha-ketoglutarate-dependent dioxygenase alkB homolog 2-like
       106721761 activating signal cointegrator 1 complex subunit 3
       106719010 deoxyribodipyrimidine photo-lyase-like
       106719033 deoxyribodipyrimidine photo-lyase-like
       106719034 deoxyribodipyrimidine photo-lyase-like
       106719036 deoxyribodipyrimidine photo-lyase-like
       106707729 uncharacterized protein LOC106707729
       106716154 single-strand selective monofunctional uracil DNA glycosylase
       106709127 uncharacterized protein LOC106709127 isoform X1
       106712621 N-glycosylase/DNA lyase-like
       106713340 endonuclease III-like protein 1
       106710554 recombination repair protein 1-like
       106718556 DNA polymerase delta catalytic subunit
       106714987 DNA polymerase delta subunit 2-like
       106714989 DNA polymerase delta small subunit-like
       106711870 DNA polymerase delta subunit 3-like
       106712041 LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A
       106713272 DNA polymerase epsilon subunit 2
       106708081 DNA polymerase epsilon subunit 3
       106721347 DNA polymerase epsilon subunit 4
       106709885 proliferating cell nuclear antigen
       106718676 flap endonuclease 1
       106716423 DNA ligase 1
       106709522 DNA polymerase beta-like
       106710098 DNA repair protein XRCC1
       106718771 DNA ligase 3
       106710511 probable tyrosyl-DNA phosphodiesterase isoform X1
       106719089 aprataxin-like protein
       106718902 LOW QUALITY PROTEIN: aprataxin and PNK-like factor
       106717833 uncharacterized protein F21D5.5
       106710620 high mobility group protein DSP1-like isoform X1
       106719392 poly [ADP-ribose] polymerase 1-like
       106714742 poly [ADP-ribose] polymerase-like
       106719393 poly [ADP-ribose] polymerase-like
       106708592 DNA repair protein complementing XP-C cells homolog
       106710735 UV excision repair protein RAD23 homolog A
       106713792 calmodulin-2-like isoform X1
       106709396 caltractin-like
       106708735 RING-box protein 1A
       106715992 cullin-4B
       106707906 DNA damage-binding protein 1
       106709044 DNA-directed RNA polymerase II subunit RPB1
       106715190 uncharacterized protein LOC106715190
       106713319 DNA-directed RNA polymerase II subunit RPB2
       106721559 DNA-directed RNA polymerase II subunit RPB3
       106717879 DNA-directed RNA polymerase II 16 kDa polypeptide
       106716578 DNA-directed RNA polymerases I, II, and III subunit RPABC1
       106715448 DNA-directed RNA polymerases I, II, and III subunit RPABC2
       106712065 DNA-directed RNA polymerase II subunit RPB7
       106713416 DNA-directed RNA polymerases I, II, and III subunit RPABC3
       106711998 DNA-directed RNA polymerase II subunit RPB9
       106715327 DNA-directed RNA polymerases I, II, and III subunit RPABC5
       106720146 DNA-directed RNA polymerase II subunit RPB11
       106717598 DNA-directed RNA polymerases I, II, and III subunit RPABC4
       106718062 DNA excision repair protein ERCC-6-like
       106716680 transcription elongation factor 1 homolog
       106719182 LOW QUALITY PROTEIN: DNA excision repair protein haywire
       106714653 TFIIH basal transcription factor complex helicase XPD subunit
       106715383 general transcription factor IIH subunit 1
       106710527 general transcription factor IIH subunit 2
       106720512 general transcription factor IIH subunit 3
       106718856 general transcription factor IIH subunit 4
       106720940 general transcription factor IIH subunit 5
       106710061 cyclin-dependent kinase 7
       106710347 cyclin-H
       106716327 CDK-activating kinase assembly factor MAT1
       106710569 replication protein A 70 kDa DNA-binding subunit isoform X1
       106717820 replication protein A 32 kDa subunit
       106710903 DNA repair protein complementing XP-A cells homolog
       106720591 mating-type switching protein swi10
       106714043 DNA repair endonuclease XPF
       106718842 DNA repair protein complementing XP-G cells
       106717671 MMS19 nucleotide excision repair protein homolog
       106710702 LOW QUALITY PROTEIN: cullin-3
       106713618 cullin-5
       106718730 transcription elongation factor B polypeptide 1
       106711846 transcription elongation factor B polypeptide 2
       106719050 transcription elongation factor B polypeptide 3
       106713550 DNA mismatch repair protein Msh2
       106709764 probable DNA mismatch repair protein Msh6
       106720472 DNA mismatch repair protein Mlh1
       106713749 mismatch repair endonuclease PMS2 isoform X1
       106707801 replication factor C subunit 1-like
       106712349 replication factor C subunit 4
       106715119 replication factor C subunit 2
       106719669 replication factor C subunit 3
       106717727 replication factor C subunit 5
       106713713 LOW QUALITY PROTEIN: exonuclease 1
       106715366 exonuclease 1-like
       106709571 double-strand break repair protein MRE11
       106710525 DNA repair protein RAD50
       106718098 nibrin
       106709432 BRCA1-associated RING domain protein 1-like
       106709395 BRCA1-associated RING domain protein 1-like
       106713784 BRCA1-A complex subunit Abraxas-like
       106720687 BRISC and BRCA1-A complex member 1-like
       106715064 BRCA1-A complex subunit BRE-like
       106710728 lys-63-specific deubiquitinase BRCC36-like
       106714490 Fanconi anemia group J protein homolog
       106711017 DNA topoisomerase 2-binding protein 1-A-like
       106709190 muscle M-line assembly protein unc-89-like
       106715806 breast cancer type 2 susceptibility protein homolog isoform X1
       106721547 DNA repair protein RAD51 homolog A
       106711089 DNA repair protein RAD51 homolog A-like
       106715387 DNA repair protein RAD51 homolog 3-like
       106718495 DNA repair protein RAD51 homolog 4
       106721492 DNA repair protein XRCC3
       106715840 DNA repair protein RAD52 homolog
       106712976 DNA repair and recombination protein RAD54-like
       106714973 LOW QUALITY PROTEIN: uncharacterized protein LOC106714973
       106718090 ATP-dependent DNA helicase Q1-like
       106711379 Bloom syndrome protein homolog
       106719178 ATP-dependent DNA helicase Q4
       106709513 ATP-dependent DNA helicase Q5-like
       106720805 DNA topoisomerase 3-beta-1
       106717470 DNA topoisomerase 3-alpha-like
       106713236 recQ-mediated genome instability protein 1-like
       106711178 uncharacterized protein LOC106711178
       106709869 serine/threonine-protein phosphatase 4 catalytic subunit
       106711168 serine/threonine-protein phosphatase 4 regulatory subunit 2
       106721453 serine/threonine-protein phosphatase 4 regulatory subunit 3
       106721173 structural maintenance of chromosomes protein 5
       106713906 structural maintenance of chromosomes protein 6-like
       106717656 non-structural maintenance of chromosomes element 1 homolog
       106709944 E3 SUMO-protein ligase NSE2-like
       106715630 melanoma-associated antigen G1-like
       106713197 EP300-interacting inhibitor of differentiation 3-like
       106713567 crossover junction endonuclease EME1-like
       106721458 crossover junction endonuclease EME1-like isoform X1
       106707829 exonuclease 3'-5' domain-containing protein 2
       106711341 LOW QUALITY PROTEIN: crossover junction endonuclease MUS81
       106714578 structure-specific endonuclease subunit SLX1 homolog isoform X1
       106712244 flap endonuclease GEN
       106720361 spatacsin
       106721449 zinc finger FYVE domain-containing protein 26 homolog
       106709979 mortality factor 4-like protein 1
       106718407 fidgetin-like protein 1
       106708037 uncharacterized protein LOC106708037
       106708041 uncharacterized protein LOC106708041
       106708297 uncharacterized protein LOC106708297 isoform X1
       106718847 protein EMSY
       106713708 tonsoku-like protein
       106716229 LOW QUALITY PROTEIN: biorientation of chromosomes in cell division protein 1-like 1
       106716600 X-ray repair cross-complementing protein 6
       106713157 X-ray repair cross-complementing protein 5-like
       106709251 DNA ligase 4
       106721594 DNA repair protein XRCC4-like
       106708560 protein artemis-like
       106719078 E3 ubiquitin-protein ligase FANCL
       106720779 uncharacterized protein LOC106720779
       106715808 uncharacterized protein LOC106715808
       106721239 uncharacterized protein LOC106721239
       106716440 ubiquitin-conjugating enzyme E2 T-like
       106707884 Fanconi anemia group D2 protein
       106718015 uncharacterized protein LOC106718015
       106713595 fanconi-associated nuclease 1-like isoform X1
       106719647 ubiquitin carboxyl-terminal hydrolase 1
       106720352 WD repeat-containing protein 48 homolog
       106719559 serine/threonine-protein phosphatase 6 catalytic subunit
       106709456 putative golgin subfamily A member 6-like protein 6 isoform X1
       106712316 E3 ubiquitin-protein ligase RNF168-like
       106719553 probable E3 ubiquitin-protein ligase HERC2
       106708778 telomerase Cajal body protein 1
       106720147 zinc finger CW-type PWWP domain protein 1-like
       106717768 gastrulation defective protein 1 homolog
       106718429 DNA polymerase eta isoform X1
       106716168 DNA polymerase iota
       106713940 DNA repair protein REV1-like
       106720601 DNA polymerase zeta catalytic subunit
       106721371 DNA polymerase nu-like
       106715432 ubiquitin-conjugating enzyme E2-17 kDa
       106719129 ubiquitin-conjugating enzyme E2 variant 2
       106713911 ubiquitin-conjugating enzyme E2 N
       106719508 sprT-like domain-containing protein Spartan
       106716637 uncharacterized protein LOC106716637
       106709898 cell cycle checkpoint control protein RAD9A
       106711125 checkpoint protein HUS1
       106718573 cell cycle checkpoint protein RAD1
       106717704 cell cycle checkpoint protein RAD17
       106717412 protein timeless homolog
       106710946 protein TIPIN homolog
       106721461 dentin sialophosphoprotein-like
       106712827 TELO2-interacting protein 1 homolog
       106720599 uncharacterized protein LOC106720599
       106717023 large proline-rich protein BAG6-like
       106710970 ubiquitin-like protein 4A
       106718113 Golgi to ER traffic protein 4 homolog
       106710139 LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR-like
       106710662 serine-protein kinase ATM
       106712696 serine/threonine-protein kinase grp-like
       106717857 ovarian-specific serine/threonine-protein kinase Lok-like
       106710881 M-phase inducer phosphatase 1-B-like isoform X1
       106709057 14-3-3 protein zeta isoform X1
       106713066 14-3-3 protein epsilon
       106710314 protein sickie
       106708304 wee1-like protein kinase
       106719908 period circadian protein isoform X1
       106711993 transcriptional regulator ATRX-like
       106715329 plastin-2
       106718454 LOW QUALITY PROTEIN: protein downstream neighbor of son homolog
       106718692 vacuolar protein sorting-associated protein 4A
       106721477 abscission/NoCut checkpoint regulator
       106716432 protein SDE2 homolog
       106720597 DNA polymerase theta
       106709844 DNA polymerase V-like
       106715110 three-prime repair exonuclease 1
       106714511 DNA cross-link repair 1A protein
       106715841 ankyrin repeat and LEM domain-containing protein 1-like
       106708641 helicase POLQ-like
       106718989 pre-mRNA-processing factor 19
       106720590 cell division cycle 5-related protein
       106719482 pre-mRNA-splicing factor SPF27
       106709710 LOW QUALITY PROTEIN: pleiotropic regulator 1
       106707284 pleiotropic regulator 1-like
       106721409 7,8-dihydro-8-oxoguanine triphosphatase-like
       106713793 8-oxo-dGDP phosphatase NUDT18
       106715471 deoxyuridine 5'-triphosphate nucleotidohydrolase
       106714132 ribonucleoside-diphosphate reductase large subunit
       106713913 ribonucleoside-diphosphate reductase subunit M2
       106719571 DNA-3-methyladenine glycosylase 1-like
       106708541 single-stranded DNA-binding protein, mitochondrial
K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
K10800 SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K02328 POLD2; DNA polymerase delta subunit 2
K03504 POLD3; DNA polymerase delta subunit 3
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
K10803 XRCC1; DNA-repair protein XRCC1
K10776 LIG3; DNA ligase 3 [EC:6.5.1.1]
K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
K13295 APLF; aprataxin and PNK-like factor [EC:3.1.-.-]
K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
K10802 HMGB1; high mobility group protein B1
K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
K10838 XPC; xeroderma pigmentosum group C-complementing protein
K10839 RAD23; UV excision repair protein RAD23
K10840 CETN2; centrin-2
K10840 CETN2; centrin-2
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K10609 CUL4; cullin 4
K10610 DDB1; DNA damage-binding protein 1
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
K10841 ERCC6; DNA excision repair protein ERCC-6
K25829 ELOF1; transcription elongation factor 1
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K06634 CCNH; cyclin H
K10842 MNAT1; CDK-activating kinase assembly factor MAT1
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10847 XPA; DNA-repair protein complementing XP-A cells
K10849 ERCC1; DNA excision repair protein ERCC-1
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10846 ERCC5; DNA excision repair protein ERCC-5
K15075 MET18; DNA repair/transcription protein MET18/MMS19
K03869 CUL3; cullin 3
K10612 CUL5; cullin 5
K03872 ELOC; elongin-C
K03873 ELOB; elongin-B
K15076 ELOA; elongin-A
K08735 MSH2; DNA mismatch repair protein MSH2
K08737 MSH6; DNA mismatch repair protein MSH6
K08734 MLH1; DNA mismatch repair protein MLH1
K10858 PMS2; DNA mismatch repair protein PMS2
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K10865 MRE11; double-strand break repair protein MRE11
K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
K10867 NBN; nibrin
K10683 BARD1; BRCA1-associated RING domain protein 1
K10683 BARD1; BRCA1-associated RING domain protein 1
K20774 FAM175A; BRCA1-A complex subunit Abraxas
K20776 BABAM; BRISC and BRCA1-A complex member 1
K12173 BRE; BRCA1-A complex subunit BRE
K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
K20773 RBBP8; DNA endonuclease RBBP8 [EC:3.1.-.-]
K08775 BRCA2; breast cancer 2 susceptibility protein
K04482 RAD51; DNA repair protein RAD51
K04482 RAD51; DNA repair protein RAD51
K10870 RAD51L2; RAD51-like protein 2
K10871 RAD51L3; RAD51-like protein 3
K10880 XRCC3; DNA-repair protein XRCC3
K10873 RAD52; DNA repair and recombination protein RAD52
K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
K10876 RAD54L2; RAD54-like protein 2 [EC:5.6.2.-]
K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
K10902 RECQL5; ATP-dependent DNA helicase Q5 [EC:5.6.2.4]
K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
K10990 RMI1; RecQ-mediated genome instability protein 1
K15365 RMI2; RecQ-mediated genome instability protein 2
K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
K17491 SMEK; protein phosphatase 4 regulatory subunit 3
K22803 SMC5; structural maintenance of chromosomes protein 5
K22804 SMC6; structural maintenance of chromosomes protein 6
K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
K22823 NSMCE3; non-structural maintenance of chromosomes element 3
K22825 NSMCE4; non-structural maintenance of chromosomes element 4
K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
K19026 SPG11; spatacsin
K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
K11339 MORF4L1; mortality factor 4-like protein 1
K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
K23112 BRAT1; BRCA1-associated ATM activator 1
K23112 BRAT1; BRCA1-associated ATM activator 1
K23456 CFAP410; cilla- and flagella-associated protein
K25790 EMSY; BRCA2-interacting transcriptional repressor EMSY
K09257 NFKBIL2; NF-kappa-B inhibitor-like protein 2
K27262 BOD1L1; biorientation of chromosomes in cell division protein 1-like 1
K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
K10886 XRCC4; DNA-repair protein XRCC4
K10887 DCLRE1C; DNA cross-link repair 1C protein [EC:3.1.-.-]
K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
K10896 FANCM; fanconi anemia group M protein
K15360 STRA13; centromere protein X
K15360 STRA13; centromere protein X
K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
K10891 FANCD2; fanconi anemia group D2 protein
K10895 FANCI; fanconi anemia group I protein
K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
K11832 USP1; ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
K15361 WDR48; WD repeat-containing protein 48
K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
K10667 RNF8; E3 ubiquitin-protein ligase RNF8 [EC:2.3.2.27]
K20779 RNF168; E3 ubiquitin-protein ligase RNF168 [EC:2.3.2.31]
K10595 HERC2; E3 ubiquitin-protein ligase HERC2 [EC:2.3.2.26]
K23314 WRAP53; telomerase Cajal body protein 1
K24688 ZCWPW1; zinc finger CW-type PWWP domain protein 1
K24752 WDR70; WD repeat-containing protein 70
K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
K16618 POLN; DNA polymerase nu [EC:2.7.7.7]
K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
K24051 SPRTN; SprT-like domain-contaning protein Spartan
K26957 GCNA; germ cell nuclear acidic protein
K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
K10903 HUS1; HUS1 checkpoint protein
K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
K06662 HRAD17; cell cycle checkpoint protein
K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
K25773 CLSPN; claspin
K20403 TTI1; TELO2-interacting protein 1
K23115 TTI2; TELO2-interacting protein 2
K23390 BAG6; large proline-rich protein BAG6
K23388 UBL4; ubiquitin-like protein 4
K23387 GET4; golgi to ER traffic protein 4
K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
K06630 YWHAE; 14-3-3 protein epsilon
K19483 NAV2; neuron navigator 2 [EC:5.6.2.4]
K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
K02633 PER2; period circadian protein 2
K20780 MDC1; mediator of DNA damage checkpoint protein 1
K17336 PLS3; plastin-3
K22422 DONSON; protein downstream neighbor of Son
K12196 VPS4; vacuolar protein-sorting-associated protein 4
K24778 ZFYVE19; abscission/NoCut checkpoint regulator
K25059 SDE2; replication stress response regulator SDE2
K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
K10790 TREX1; three prime repair exonuclease 1 [EC:3.1.11.2]
K15340 DCLRE1A; DNA cross-link repair 1A protein
K21411 ANKLE1; ankyrin repeat and LEM domain-containing protein 1
K19178 HELQ; POLQ-like helicase [EC:5.6.2.4]
K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
K12861 BCAS2; pre-mRNA-splicing factor SPF27
K12862 PLRG1; pleiotropic regulator 1
K12862 PLRG1; pleiotropic regulator 1
K17816 NUDT1; 8-oxo-dGTP diphosphatase / 2-hydroxy-dATP diphosphatase [EC:3.6.1.55 3.6.1.56]
K17817 NUDT18; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K03111 ssb; single-strand DNA-binding protein
     03029 Mitochondrial biogenesis [BR:pmac03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

[ KO | BRITE | KEGG2 | KEGG ]
Last updated: April 18, 2024