KEGG Orthology (KO) - Paraphotobacterium marinum

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
 
   09106 Metabolism of other amino acids
     00410 beta-Alanine metabolism [PATH:pmai00410]
     00430 Taurine and hypotaurine metabolism [PATH:pmai00430]
     00440 Phosphonate and phosphinate metabolism [PATH:pmai00440]
     00450 Selenocompound metabolism [PATH:pmai00450]
     00460 Cyanoamino acid metabolism
     00471 D-Glutamine and D-glutamate metabolism [PATH:pmai00471]
     00472 D-Arginine and D-ornithine metabolism
     00473 D-Alanine metabolism [PATH:pmai00473]
       CF386_04165 alr; alanine racemase
       CF386_10330 D-alanine--D-alanine ligase A
K01775 alr; alanine racemase [EC:5.1.1.1]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
     00480 Glutathione metabolism [PATH:pmai00480]
 
   09107 Glycan biosynthesis and metabolism
     00510 N-Glycan biosynthesis
     00513 Various types of N-glycan biosynthesis
     00512 Mucin type O-glycan biosynthesis
     00515 Mannose type O-glycan biosynthesis
     00514 Other types of O-glycan biosynthesis
     00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
     00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
     00533 Glycosaminoglycan biosynthesis - keratan sulfate
     00531 Glycosaminoglycan degradation
     00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
     00601 Glycosphingolipid biosynthesis - lacto and neolacto series
     00603 Glycosphingolipid biosynthesis - globo and isoglobo series
     00604 Glycosphingolipid biosynthesis - ganglio series
     00540 Lipopolysaccharide biosynthesis [PATH:pmai00540]
     00541 O-Antigen nucleotide sugar biosynthesis [PATH:pmai00541]
     00550 Peptidoglycan biosynthesis [PATH:pmai00550]
       CF386_02230 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       CF386_03860 UDP-N-acetylenolpyruvoylglucosamine reductase
       CF386_02095 UDP-N-acetylmuramate--L-alanine ligase
       CF386_02115 hypothetical protein
       CF386_02130 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2
       CF386_10330 D-alanine--D-alanine ligase A
       CF386_02125 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
       CF386_01405 di-trans
       CF386_10955 undecaprenyl-diphosphatase
       CF386_02120 phospho-N-acetylmuramoyl-pentapeptide-transferase
       CF386_02660 penicillin-sensitive transpeptidase
       CF386_00340 mrcB; penicillin-binding protein 1B
       CF386_01175 hypothetical protein
       CF386_02135 peptidoglycan glycosyltransferase FtsI
       CF386_01180 D-alanyl-D-alanine carboxypeptidase
       CF386_02295 D-alanyl-D-alanine carboxypeptidase
       CF386_04775 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.1.129 3.4.16.4]
K05365 mrcB; penicillin-binding protein 1B [EC:2.4.1.129 3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
     00511 Other glycan degradation
     00571 Lipoarabinomannan (LAM) biosynthesis
     00572 Arabinogalactan biosynthesis - Mycobacterium
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
   09161 Cancer: overview
 
   09162 Cancer: specific types
 
   09163 Immune disease
 
   09164 Neurodegenerative disease
 
   09165 Substance dependence
 
   09166 Cardiovascular disease
 
   09167 Endocrine and metabolic disease
 
   09171 Infectious disease: bacterial
 
   09172 Infectious disease: viral
 
   09174 Infectious disease: parasitic
 
   09175 Drug resistance: antimicrobial
     01501 beta-Lactam resistance [PATH:pmai01501]
     01502 Vancomycin resistance [PATH:pmai01502]
       CF386_10330 D-alanine--D-alanine ligase A
       CF386_04165 alr; alanine racemase
       CF386_02125 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
       CF386_02120 phospho-N-acetylmuramoyl-pentapeptide-transferase
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
     01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:pmai01503]
 
   09176 Drug resistance: antineoplastic
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
     01000 Enzymes [BR:pmai01000]
     01001 Protein kinases [BR:pmai01001]
     01009 Protein phosphatases and associated proteins [BR:pmai01009]
     01002 Peptidases and inhibitors [BR:pmai01002]
     01003 Glycosyltransferases [BR:pmai01003]
     01005 Lipopolysaccharide biosynthesis proteins [BR:pmai01005]
     01011 Peptidoglycan biosynthesis and degradation proteins [BR:pmai01011]
       CF386_02230 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       CF386_03860 UDP-N-acetylenolpyruvoylglucosamine reductase
       CF386_02095 UDP-N-acetylmuramate--L-alanine ligase
       CF386_02115 hypothetical protein
       CF386_02130 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2
       CF386_10330 D-alanine--D-alanine ligase A
       CF386_04165 alr; alanine racemase
       CF386_03830 glutamate racemase
       CF386_11185 LD-carboxypeptidase
       CF386_02120 phospho-N-acetylmuramoyl-pentapeptide-transferase
       CF386_10955 undecaprenyl-diphosphatase
       CF386_04730 mviN; murein biosynthesis integral membrane protein MurJ
       CF386_02660 penicillin-sensitive transpeptidase
       CF386_00340 mrcB; penicillin-binding protein 1B
       CF386_01175 hypothetical protein
       CF386_02135 peptidoglycan glycosyltransferase FtsI
       CF386_01180 D-alanyl-D-alanine carboxypeptidase
       CF386_02295 D-alanyl-D-alanine carboxypeptidase
       CF386_04775 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
       CF386_12175 hypothetical protein
       CF386_12130 peptidase
       CF386_05785 hypothetical protein
       CF386_04905 lytic murein transglycosylase
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01776 murI; glutamate racemase [EC:5.1.1.3]
K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K03980 murJ; putative peptidoglycan lipid II flippase
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.1.129 3.4.16.4]
K05365 mrcB; penicillin-binding protein 1B [EC:2.4.1.129 3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
K19236 ycfS; L,D-transpeptidase YcfS
K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
K08309 slt; soluble lytic murein transglycosylase [EC:4.2.2.-]
     01004 Lipid biosynthesis proteins [BR:pmai01004]
     01008 Polyketide biosynthesis proteins
     01006 Prenyltransferases [BR:pmai01006]
     01007 Amino acid related enzymes [BR:pmai01007]
     00199 Cytochrome P450
     00194 Photosynthesis proteins [BR:pmai00194]
 
   09182 Protein families: genetic information processing
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: November 23, 2020