Chromosome and Associated Proteins - Parus major (Great Tit)

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     KO
 Eukaryotic type
   Sister chromatid cohesion proteins
   Meiosis-specific proteins
   Nucleosome assembly factors
   Histone modification proteins
     HATs (histone acetyltransferases)
     HAT complexes
     HDACs (histone deacetylases)
     HDAC complexes
     HMTs (histone methyltransferases)
       HKMTs (histone lysine methyltransferases)
         107214568 ASH1L; histone-lysine N-methyltransferase ASH1L isoform X1
         107215544 DOT1L; histone-lysine N-methyltransferase, H3 lysine-79 specific isoform X1
         107212039 EHMT1; histone-lysine N-methyltransferase EHMT1 isoform X1
         107215126 EZH1; histone-lysine N-methyltransferase EZH1
         107200653 EZH2; histone-lysine N-methyltransferase EZH2 isoform X1
         107214385 KMT2A; histone-lysine N-methyltransferase 2A isoform X2
         107198594 KMT2D; LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2D
         107216349 KMT2C; histone-lysine N-methyltransferase 2C isoform X1
         107204272 KMT2E; inactive histone-lysine N-methyltransferase 2E isoform X1
         107210674 NSD1; histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific isoform X1
         107202885 NSD2; histone-lysine N-methyltransferase NSD2 isoform X1
         107213840 NSD3; histone-lysine N-methyltransferase NSD3 isoform X1
         107213672 PRDM2; PR domain zinc finger protein 2 isoform X1
         107208729 MECOM; histone-lysine N-methyltransferase MECOM isoform X1
         107216286 PRDM6; putative histone-lysine N-methyltransferase PRDM6
         107207130 ZNF488; zinc finger protein 488
         107202709 PRDM8; PR domain zinc finger protein 8
         107211962 PRDM12; PR domain zinc finger protein 12
         107213569 PRDM16; histone-lysine N-methyltransferase PRDM16 isoform X1
         107211664 SETD1B; histone-lysine N-methyltransferase SETD1B
         107215411 SETD2; histone-lysine N-methyltransferase SETD2
         107211635 SETD4; SET domain-containing protein 4 isoform X1
         107209826 SETD6; N-lysine methyltransferase SETD6 isoform X1
         107203381 SETD7; histone-lysine N-methyltransferase SETD7 isoform X1
         107211636 KMT5A; N-lysine methyltransferase KMT5A
         107214655 SETDB1; histone-lysine N-methyltransferase SETDB1 isoform X1
         107211503 histone-lysine N-methyltransferase SETDB2
         107210432 histone-lysine N-methyltransferase SETMAR
         107203527 SMYD1; histone-lysine N-methyltransferase SMYD1 isoform X1
         107202430 SMYD3; histone-lysine N-methyltransferase SMYD3 isoform X1
         107202071 SMYD2; N-lysine methyltransferase SMYD2
         107204624 SUV39H2; histone-lysine N-methyltransferase SUV39H2
         107205911 KMT5B; histone-lysine N-methyltransferase KMT5B isoform X1
K06101 ASH1L; [histone H3]-lysine4 N-trimethyltransferase ASH1L [EC:2.1.1.354] 
K11427 DOT1L; [histone H3]-lysine79 N-trimethyltransferase [EC:2.1.1.360] 
K11420 EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT [EC:2.1.1.355] 
K17451 EZH1; [histone H3]-lysine27 N-trimethyltransferase EZH1 [EC:2.1.1.356] 
K11430 EZH2; [histone H3]-lysine27 N-trimethyltransferase EZH2 [EC:2.1.1.356] 
K09186 MLL1; [histone H3]-lysine4 N-trimethyltransferase MLL1 [EC:2.1.1.354] 
K09187 MLL2; [histone H3]-lysine4 N-trimethyltransferase MLL2 [EC:2.1.1.354] 
K09188 MLL3; [histone H3]-lysine4 N-trimethyltransferase MLL3 [EC:2.1.1.354] 
K09189 MLL5; [histone H3]-lysine4 N-trimethyltransferase MLL5 [EC:2.1.1.354] 
K15588 NSD1; [histone H3]-lysine36 N-dimethyltransferase NSD1 [EC:2.1.1.357] 
K11424 WHSC1; [histone H3]-lysine36 N-dimethyltransferase NSD2 [EC:2.1.1.357] 
K11425 WHSC1L1; [histone H3]-lysine4 N-dimethyltransferase / [histone H3]-lysine27 N-dimethyltransferase [EC:2.1.1.370 2.1.1.371] 
K11432 PRDM2; [histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:2.1.1.355] 
K04462 MECOM; [histone H3]-lysine9 N-methyltransferase (ecotropic virus integration site 1 protein) [EC:2.1.1.367] 
K20795 PRDM6; [histone H4]-lysine20 N-methyltransferase PRDM6 [EC:2.1.1.361] 
K20797 PRDM8; PR domain zinc finger protein 8 [EC:2.1.1.-] 
K20797 PRDM8; PR domain zinc finger protein 8 [EC:2.1.1.-] 
K24255 PRDM12; PR domain zinc finger protein 12 [EC:2.1.1.-] 
K22410 PRDM16; [histone H3]-lysine9 N-methyltransferase [EC:2.1.1.367] 
K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] 
K11423 SETD2; [histone H3]-lysine36 N-trimethyltransferase [EC:2.1.1.359] 
K27277 SETD4; SET domain-containing protein 4 [EC:2.1.1.- 2.1.1.364] 
K05302 SETD6; N-lysine methyltransferase SETD6 [EC:2.1.1.-] 
K11431 SETD7; [histone H3]-lysine4 N-methyltransferase [EC:2.1.1.364] 
K11428 SETD8; [histone H4]-lysine20 N-methyltransferase SETD8 [EC:2.1.1.361] 
K11421 SETDB1; [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:2.1.1.366] 
K18494 SETDB2; [histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:2.1.1.355] 
K11433 SETMAR; [histone H3]-lysine36 N-dimethyltransferase SETMAR [EC:2.1.1.357] 
K11426 SMYD; [histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:2.1.1.354 2.1.1.357] 
K11426 SMYD; [histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:2.1.1.354 2.1.1.357] 
K11426 SMYD; [histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:2.1.1.354 2.1.1.357] 
K11419 SUV39H; [histone H3]-lysine9 N-trimethyltransferase SUV39H [EC:2.1.1.355] 
K11429 SUV420H; [histone H4]-N-methyl-L-lysine20 N-methyltransferase [EC:2.1.1.362] 
       PRMTs (protein arginine metyltransferases)
     HMT complexes
       COMPASS/SET1 complex
         107211664 SETD1B; histone-lysine N-methyltransferase SETD1B
         107214771 RBBP5; retinoblastoma-binding protein 5
         107210260 WDR82; WD repeat-containing protein 82 isoform X1
         107211986 WDR5; WD repeat-containing protein 5
         107213852 ASH2L; set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X3
         107201860 DPY30; protein dpy-30 homolog
K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] 
K14961 RBBP5; COMPASS component SWD1 
K14962 WDR82; COMPASS component SWD2 
K14963 WDR5; COMPASS component SWD3 
K14964 ASH2; Set1/Ash2 histone methyltransferase complex subunit ASH2 
K14965 DPY30; protein dpy-30 
       COMPASS/SET1 complex (yeast)
         107211664 SETD1B; histone-lysine N-methyltransferase SETD1B
         107214771 RBBP5; retinoblastoma-binding protein 5
         107210260 WDR82; WD repeat-containing protein 82 isoform X1
         107211986 WDR5; WD repeat-containing protein 5
K11422 SETD1; [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354] 
K14961 RBBP5; COMPASS component SWD1 
K14962 WDR82; COMPASS component SWD2 
K14963 WDR5; COMPASS component SWD3 
       MLL-HCF complex
       MLL3/MLL4 complex
       Dot1-containing complex
     Histone demethylases
     Polycomb repressive complex (PRC) and associated proteins
     Sir proteins
     Other histone modification proteins
   Chromosome condensation proteins
   Centromeric chromatin formation proteins
   Heterochromatin formation proteins
   Gene silencing
   Centrosome formation proteins
   Sister chromatid separation proteins
   Chromatin remodeling factors
 
 Prokaryotic type

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Last updated: April 10, 2024