Chromosome and Associated Proteins - Populus trichocarpa (black cottonwood)

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     KO
 Eukaryotic type
   Sister chromatid cohesion proteins
   Meiosis-specific sister chromatid cohesion proteins
   Nucleosome assembly factors
   Histone modification proteins
   Chromosome condensation proteins
   Centromeric chromatin formation proteins
   Heterochromatin formation proteins
     HP1 (heterochromatin protein 1)
     MBPs (metylated DNA binding proteins)
     Other heterochromatin formation proteins
       7487714 LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 20
       7453540 protein CHROMATIN REMODELING 20
       7483264 DNA (cytosine-5)-methyltransferase CMT3
       112325061 DNA (cytosine-5)-methyltransferase 1-like isoform X1
       7484095 DNA (cytosine-5)-methyltransferase 1 isoform X1
       18096996 DNA (cytosine-5)-methyltransferase CMT2 isoform X1
       7463012 DNA (cytosine-5)-methyltransferase 1
       7481744 uncharacterized protein LOC7481744
       18098684 uncharacterized protein LOC18098684
       7490755 histone deacetylase 9 isoform X1
       7496475 histone deacetylase 19 isoform X2
       7456903 histone deacetylase 6
       7453794 histone deacetylase 6
       18098185 histone deacetylase 19
       7465229 helicase protein MOM1 isoform X2
       7468676 CHD3-type chromatin-remodeling factor PICKLE isoform X4
       7458410 CHD3-type chromatin-remodeling factor PICKLE isoform X1
       18098215 LOW QUALITY PROTEIN: helicase protein MOM1
       7470405 WD-40 repeat-containing protein MSI3
       18107675 WD-40 repeat-containing protein MSI4
       7469389 WD-40 repeat-containing protein MSI1
       7481463 WD-40 repeat-containing protein MSI1
       18096751 WD-40 repeat-containing protein MSI4
       18100383 WD-40 repeat-containing protein MSI4
       7494244 WD-40 repeat-containing protein MSI2
       7469070 paired amphipathic helix protein Sin3-like 4 isoform X2
       112324251 paired amphipathic helix protein Sin3-like 2
       7460792 paired amphipathic helix protein Sin3-like 4
       18095308 paired amphipathic helix protein Sin3-like 2 isoform X1
       7461683 paired amphipathic helix protein Sin3-like 3
       7464275 uncharacterized protein LOC7464275 isoform X1
K10779 ATRX; transcriptional regulator ATRX [EC:3.6.4.12] 
K10779 ATRX; transcriptional regulator ATRX [EC:3.6.4.12] 
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] 
K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37] 
K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37] 
K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] 
K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] 
K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] 
K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] 
K06067 HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98] 
K11642 CHD3; chromodomain-helicase-DNA-binding protein 3 [EC:3.6.4.12] 
K11643 CHD4; chromodomain-helicase-DNA-binding protein 4 [EC:3.6.4.12] 
K11643 CHD4; chromodomain-helicase-DNA-binding protein 4 [EC:3.6.4.12] 
K11643 CHD4; chromodomain-helicase-DNA-binding protein 4 [EC:3.6.4.12] 
K10752 RBBP4; histone-binding protein RBBP4 
K10752 RBBP4; histone-binding protein RBBP4 
K10752 RBBP4; histone-binding protein RBBP4 
K10752 RBBP4; histone-binding protein RBBP4 
K10752 RBBP4; histone-binding protein RBBP4 
K10752 RBBP4; histone-binding protein RBBP4 
K10752 RBBP4; histone-binding protein RBBP4 
K11644 SIN3A; paired amphipathic helix protein Sin3a 
K11644 SIN3A; paired amphipathic helix protein Sin3a 
K11644 SIN3A; paired amphipathic helix protein Sin3a 
K11644 SIN3A; paired amphipathic helix protein Sin3a 
K11644 SIN3A; paired amphipathic helix protein Sin3a 
K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1 
   Gene silencing
   Centrosome formation and ciliogenesis proteins
   Sister chromatid separation proteins
   Chromatin remodeling factors
 
 Prokaryotic type

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Last updated: January 20, 2020