KEGG Orthology (KO) - Pseudomonas putida F1

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
 
   09106 Metabolism of other amino acids
     00410 beta-Alanine metabolism [PATH:ppf00410]
     00430 Taurine and hypotaurine metabolism [PATH:ppf00430]
     00440 Phosphonate and phosphinate metabolism [PATH:ppf00440]
     00450 Selenocompound metabolism [PATH:ppf00450]
     00460 Cyanoamino acid metabolism [PATH:ppf00460]
     00470 D-Amino acid metabolism [PATH:ppf00470]
       Pput_5179 alanine racemase
       Pput_1521 D-alanine--D-alanine ligase
       Pput_1516 D-alanine--D-alanine ligase
       Pput_4385 D-alanine--D-alanine ligase
       Pput_2041 alanine racemase
       Pput_3197 Glutaminase
       Pput_3237 L-asparaginase, type II
       Pput_0764 glutamate racemase
       Pput_4389 UDP-N-acetylmuramoylalanine--D-glutamate ligase
       Pput_3070 D-serine ammonia-lyase
       Pput_2751 diaminopimelate epimerase
       Pput_5137 diaminopimelate epimerase
       Pput_5136 diaminopimelate decarboxylase
       Pput_3663 diaminopimelate decarboxylase
       Pput_3492 FAD dependent oxidoreductase
       Pput_1285 proline racemase
       Pput_1282 FAD dependent oxidoreductase
       Pput_1284 dihydrodipicolinate synthetase
       Pput_3101 aldehyde dehydrogenase
       Pput_1283 aldehyde dehydrogenase
       Pput_3131 aldehyde dehydrogenase
       Pput_1556 D-amino-acid dehydrogenase
       Pput_5180 D-amino acid dehydrogenase small subunit
K01775 alr; alanine racemase [EC:5.1.1.1]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K25317 alr; amino-acid racemase [EC:5.1.1.10]
K01425 glsA; glutaminase [EC:3.5.1.2]
K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
K01776 murI; glutamate racemase [EC:5.1.1.3]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
K21060 lhpB; D-hydroxyproline dehydrogenase [EC:1.5.99.-]
K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
     00480 Glutathione metabolism [PATH:ppf00480]
 
   09107 Glycan biosynthesis and metabolism
     00510 N-Glycan biosynthesis
     00513 Various types of N-glycan biosynthesis
     00512 Mucin type O-glycan biosynthesis
     00515 Mannose type O-glycan biosynthesis
     00514 Other types of O-glycan biosynthesis
     00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
     00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
     00533 Glycosaminoglycan biosynthesis - keratan sulfate
     00531 Glycosaminoglycan degradation
     00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
     00601 Glycosphingolipid biosynthesis - lacto and neolacto series
     00603 Glycosphingolipid biosynthesis - globo and isoglobo series
     00604 Glycosphingolipid biosynthesis - ganglio series
     00511 Other glycan degradation
     00540 Lipopolysaccharide biosynthesis [PATH:ppf00540]
     00542 O-Antigen repeat unit biosynthesis
     00541 O-Antigen nucleotide sugar biosynthesis [PATH:ppf00541]
     00550 Peptidoglycan biosynthesis [PATH:ppf00550]
       Pput_1003 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       Pput_3810 UDP-N-acetylmuramate dehydrogenase
       Pput_4386 UDP-N-acetylmuramate--L-alanine ligase
       Pput_4389 UDP-N-acetylmuramoylalanine--D-glutamate ligase
       Pput_4392 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
       Pput_1521 D-alanine--D-alanine ligase
       Pput_1516 D-alanine--D-alanine ligase
       Pput_4385 D-alanine--D-alanine ligase
       Pput_4391 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
       Pput_4182 Undecaprenyl pyrophosphate synthetase
       Pput_2827 Undecaprenyl-diphosphatase
       Pput_4390 Phospho-N-acetylmuramoyl-pentapeptide-transferase
       Pput_4387 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
       Pput_4980 monofunctional biosynthetic peptidoglycan transglycosylase
       Pput_4957 penicillin-binding protein, 1A family
       Pput_4547 penicillin-binding protein 1B
       Pput_0611 penicillin-binding protein 1C
       Pput_2022 peptidoglycan glycosyltransferase
       Pput_4682 cell elongation-specific peptidoglycan D,D-transpeptidase
       Pput_4393 peptidoglycan synthetase FtsI
       Pput_4678 penicillin-binding protein 6, Serine peptidase, MEROPS family S11
       Pput_3641 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
     00552 Teichoic acid biosynthesis [PATH:ppf00552]
     00571 Lipoarabinomannan (LAM) biosynthesis
     00572 Arabinogalactan biosynthesis - Mycobacterium
     00543 Exopolysaccharide biosynthesis [PATH:ppf00543]
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
   09161 Cancer: overview
 
   09162 Cancer: specific types
 
   09172 Infectious disease: viral
 
   09171 Infectious disease: bacterial
 
   09174 Infectious disease: parasitic
 
   09163 Immune disease
 
   09164 Neurodegenerative disease
 
   09165 Substance dependence
 
   09166 Cardiovascular disease
 
   09167 Endocrine and metabolic disease
 
   09175 Drug resistance: antimicrobial
     01501 beta-Lactam resistance [PATH:ppf01501]
     01502 Vancomycin resistance [PATH:ppf01502]
       Pput_1521 D-alanine--D-alanine ligase
       Pput_1516 D-alanine--D-alanine ligase
       Pput_4385 D-alanine--D-alanine ligase
       Pput_5179 alanine racemase
       Pput_4391 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
       Pput_4390 Phospho-N-acetylmuramoyl-pentapeptide-transferase
       Pput_4387 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
     01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ppf01503]
 
   09176 Drug resistance: antineoplastic
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
     01000 Enzymes [BR:ppf01000]
     01001 Protein kinases [BR:ppf01001]
     01009 Protein phosphatases and associated proteins [BR:ppf01009]
     01002 Peptidases and inhibitors [BR:ppf01002]
     01003 Glycosyltransferases [BR:ppf01003]
     01005 Lipopolysaccharide biosynthesis proteins [BR:ppf01005]
     01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppf01011]
       Pput_1003 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       Pput_3810 UDP-N-acetylmuramate dehydrogenase
       Pput_4386 UDP-N-acetylmuramate--L-alanine ligase
       Pput_4389 UDP-N-acetylmuramoylalanine--D-glutamate ligase
       Pput_4392 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
       Pput_1521 D-alanine--D-alanine ligase
       Pput_1516 D-alanine--D-alanine ligase
       Pput_4385 D-alanine--D-alanine ligase
       Pput_5179 alanine racemase
       Pput_0764 glutamate racemase
       Pput_4674 peptidase U61, LD-carboxypeptidase A
       Pput_4390 Phospho-N-acetylmuramoyl-pentapeptide-transferase
       Pput_4387 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
       Pput_2827 Undecaprenyl-diphosphatase
       Pput_0642 integral membrane protein MviN
       Pput_4957 penicillin-binding protein, 1A family
       Pput_4547 penicillin-binding protein 1B
       Pput_0611 penicillin-binding protein 1C
       Pput_2022 peptidoglycan glycosyltransferase
       Pput_4682 cell elongation-specific peptidoglycan D,D-transpeptidase
       Pput_4393 peptidoglycan synthetase FtsI
       Pput_4678 penicillin-binding protein 6, Serine peptidase, MEROPS family S11
       Pput_3641 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
       Pput_1976 murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
       Pput_4980 monofunctional biosynthetic peptidoglycan transglycosylase
       Pput_3449 ErfK/YbiS/YcfS/YnhG family protein
       Pput_3631 Peptidase M15A
       Pput_3610 Lytic transglycosylase, catalytic
       Pput_4844 MltA domain protein
       Pput_4680 lytic murein transglycosylase B
       Pput_4673 lytic murein transglycosylase
       Pput_1720 MLTD_N domain protein
       Pput_1077 Lytic transglycosylase, catalytic
       Pput_3796 aminodeoxychorismate lyase
       Pput_0969 rare lipoprotein A
       Pput_4679 rare lipoprotein A
       Pput_4773 N-acetylmuramoyl-L-alanine amidase
       Pput_0147 N-acetylmuramoyl-L-alanine amidase, family 2
       Pput_0812 N-acetylmuramoyl-L-alanine amidase, family 2
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01776 murI; glutamate racemase [EC:5.1.1.3]
K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K03980 murJ; putative peptidoglycan lipid II flippase
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
K16291 erfK; L,D-transpeptidase ErfK/SrfK
K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
     01004 Lipid biosynthesis proteins [BR:ppf01004]
     01008 Polyketide biosynthesis proteins [BR:ppf01008]
     01006 Prenyltransferases [BR:ppf01006]
     01007 Amino acid related enzymes [BR:ppf01007]
     00199 Cytochrome P450 [BR:ppf00199]
     00194 Photosynthesis proteins [BR:ppf00194]
 
   09182 Protein families: genetic information processing
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 14, 2024