09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:prd03030]
03410 Base excision repair [PATH:prd03410]
03420 Nucleotide excision repair [PATH:prd03420]
03430 Mismatch repair [PATH:prd03430]
F7984_08250 mutS; DNA mismatch repair protein MutS F7984_14925 endonuclease MutS2 F7984_08255 mutL; DNA mismatch repair endonuclease MutL F7984_16635 AAA family ATPase F7984_01920 pcrA; DNA helicase PcrA F7984_05085 ATP-dependent helicase F7984_10345 AAA family ATPase F7984_13250 exodeoxyribonuclease VII large subunit F7984_13245 xseB; exodeoxyribonuclease VII small subunit F7984_14230 recJ; single-stranded-DNA-specific exonuclease RecJ F7984_17870 ssb; single-stranded DNA-binding protein F7984_18780 ssb; single-stranded DNA-binding protein F7984_15200 dnaE; DNA polymerase III subunit alpha F7984_07015 PolC-type DNA polymerase III F7984_16680 dnaN; DNA polymerase III subunit beta F7984_00010 dnaN; DNA polymerase III subunit beta F7984_00105 dnaX; DNA polymerase III subunit gamma/tau F7984_13940 holA; DNA polymerase III subunit delta F7984_00175 holB; DNA polymerase III subunit delta' F7984_09270 3'-5' exonuclease F7984_01925 ligA; NAD-dependent DNA ligase LigA F7984_03780 hypothetical protein
K03555 mutS; DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 K03572 mutL; DNA mismatch repair protein MutL K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
03440 Homologous recombination [PATH:prd03440]
03450 Non-homologous end-joining [PATH:prd03450]
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:prd03000]
03021 Transcription machinery [BR:prd03021]
03019 Messenger RNA biogenesis [BR:prd03019]
03041 Spliceosome
03011 Ribosome [BR:prd03011]
03009 Ribosome biogenesis [BR:prd03009]
03016 Transfer RNA biogenesis [BR:prd03016]
03012 Translation factors [BR:prd03012]
03110 Chaperones and folding catalysts [BR:prd03110]
04131 Membrane trafficking [BR:prd04131]
04121 Ubiquitin system
03051 Proteasome [BR:prd03051]
03032 DNA replication proteins [BR:prd03032]
03036 Chromosome and associated proteins [BR:prd03036]
03400 DNA repair and recombination proteins [BR:prd03400]
F7984_03750 methylated-DNA--[protein]-cysteine S-methyltransferase F7984_18310 uracil-DNA glycosylase F7984_03055 mutY; A/G-specific adenine glycosylase F7984_11325 nth; endonuclease III F7984_10265 ATP-dependent DNA helicase F7984_17070 8-oxo-dGTP diphosphatase F7984_07465 8-oxo-dGTP diphosphatase F7984_15690 ytkD; nucleoside triphosphatase YtkD F7984_14590 NUDIX hydrolase F7984_12775 NUDIX domain-containing protein F7984_08920 NUDIX domain-containing protein F7984_13550 NUDIX hydrolase F7984_04425 NUDIX domain-containing protein F7984_10260 dUTP diphosphatase F7984_10290 mismatch-specific DNA-glycosylase F7984_02415 DNA-3-methyladenine glycosylase 2 family protein F7984_15120 mutM; DNA-formamidopyrimidine glycosylase F7984_06505 Fpg/Nei family DNA glycosylase F7984_09940 xth; exodeoxyribonuclease III F7984_13710 deoxyribonuclease IV F7984_14230 recJ; single-stranded-DNA-specific exonuclease RecJ F7984_01925 ligA; NAD-dependent DNA ligase LigA F7984_03780 hypothetical protein F7984_17185 uvrA; excinuclease ABC subunit UvrA F7984_17190 uvrB; excinuclease ABC subunit UvrB F7984_14890 uvrC; excinuclease ABC subunit UvrC F7984_16635 AAA family ATPase F7984_01920 pcrA; DNA helicase PcrA F7984_05085 ATP-dependent helicase F7984_10345 AAA family ATPase F7984_00605 rpoC; DNA-directed RNA polymerase subunit beta' F7984_00790 DNA-directed RNA polymerase subunit alpha F7984_18165 rpoE; DNA-directed RNA polymerase subunit delta F7984_06540 DNA-directed RNA polymerase subunit omega F7984_00290 mfd; transcription-repair coupling factor F7984_08250 mutS; DNA mismatch repair protein MutS F7984_14925 endonuclease MutS2 F7984_08255 mutL; DNA mismatch repair endonuclease MutL F7984_13250 exodeoxyribonuclease VII large subunit F7984_13245 xseB; exodeoxyribonuclease VII small subunit F7984_15200 dnaE; DNA polymerase III subunit alpha F7984_07015 PolC-type DNA polymerase III F7984_16680 dnaN; DNA polymerase III subunit beta F7984_00010 dnaN; DNA polymerase III subunit beta F7984_13940 holA; DNA polymerase III subunit delta F7984_00175 holB; DNA polymerase III subunit delta' F7984_09270 3'-5' exonuclease F7984_00105 dnaX; DNA polymerase III subunit gamma/tau F7984_17870 ssb; single-stranded DNA-binding protein F7984_18780 ssb; single-stranded DNA-binding protein F7984_14145 ATP-dependent RecD-like DNA helicase F7984_07205 recA; recombinase RecA F7984_14290 ruvA; Holliday junction branch migration protein RuvA F7984_14285 ruvB; Holliday junction branch migration DNA helicase RuvB F7984_06550 priA; primosomal protein N' F7984_00500 radA; DNA repair protein RadA F7984_00020 recF; DNA replication/repair protein RecF F7984_06630 recG; ATP-dependent DNA helicase RecG F7984_13790 recO; DNA repair protein RecO F7984_00115 recR; recombination protein RecR F7984_13215 recN; DNA repair protein RecN F7984_11310 recU; Holliday junction resolvase RecU F7984_04485 addA; helicase-exonuclease AddAB subunit AddA F7984_04480 addB; helicase-exonuclease AddAB subunit AddB F7984_05775 Ku protein F7984_05765 DNA ligase F7984_05770 DNA ligase D F7984_00035 gyrA; DNA gyrase subunit A F7984_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B F7984_06760 topA; type I DNA topoisomerase F7984_11525 HU family DNA-binding protein F7984_11640 ATP-dependent DNA helicase RecQ F7984_02410 recQ; DNA helicase RecQ F7984_13080 DNA polymerase IV F7984_11970 UV damage repair protein UvrX F7984_08780 lexA; transcriptional repressor LexA F7984_03035 recX; recombination regulator RecX F7984_14930 polX; DNA polymerase/3'-5' exonuclease PolX F7984_11355 hypothetical protein F7984_09995 ribonucleoside-diphosphate reductase subunit alpha F7984_13390 vitamin B12-dependent ribonucleotide reductase F7984_09990 ribonucleotide-diphosphate reductase subunit beta F7984_07360 R2-like ligand-binding oxidase F7984_10240 R2-like ligand-binding oxidase F7984_15215 bifunctional oligoribonuclease/PAP phosphatase NrnA
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03048 rpoE; DNA-directed RNA polymerase subunit delta K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03555 mutS; DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 K03572 mutL; DNA mismatch repair protein MutL K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K03700 recU; recombination protein U K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K03502 umuC; DNA polymerase V K01356 lexA; repressor LexA [EC:3.4.21.88] K03565 recX; regulatory protein K02347 polX; DNA polymerase (family X) K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
03029 Mitochondrial biogenesis [BR:prd03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Pradoshia sp. D12 KEGG Orthology (KO) - Pradoshia sp. D12