KEGG Orthology (KO) - Pradoshia sp. D12

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:prd03030]
     03410 Base excision repair [PATH:prd03410]
       F7984_15120 mutM; DNA-formamidopyrimidine glycosylase
       F7984_06505 Fpg/Nei family DNA glycosylase
       F7984_11325 nth; endonuclease III
       F7984_02415 DNA-3-methyladenine glycosylase 2 family protein
       F7984_10290 mismatch-specific DNA-glycosylase
       F7984_18310 uracil-DNA glycosylase
       F7984_03055 mutY; A/G-specific adenine glycosylase
       F7984_09940 xth; exodeoxyribonuclease III
       F7984_13710 deoxyribonuclease IV
       F7984_15125 polA; DNA polymerase I
       F7984_14230 recJ; single-stranded-DNA-specific exonuclease RecJ
       F7984_01925 ligA; NAD-dependent DNA ligase LigA
       F7984_03780 hypothetical protein
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
     03420 Nucleotide excision repair [PATH:prd03420]
     03430 Mismatch repair [PATH:prd03430]
     03440 Homologous recombination [PATH:prd03440]
     03450 Non-homologous end-joining [PATH:prd03450]
     03460 Fanconi anemia pathway
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:prd03000]
     03021 Transcription machinery [BR:prd03021]
     03019 Messenger RNA biogenesis [BR:prd03019]
     03041 Spliceosome
     03011 Ribosome [BR:prd03011]
     03009 Ribosome biogenesis [BR:prd03009]
     03016 Transfer RNA biogenesis [BR:prd03016]
     03012 Translation factors [BR:prd03012]
     03110 Chaperones and folding catalysts [BR:prd03110]
     04131 Membrane trafficking [BR:prd04131]
     04121 Ubiquitin system
     03051 Proteasome [BR:prd03051]
     03032 DNA replication proteins [BR:prd03032]
     03036 Chromosome and associated proteins [BR:prd03036]
     03400 DNA repair and recombination proteins [BR:prd03400]
       F7984_03750 methylated-DNA--[protein]-cysteine S-methyltransferase
       F7984_18310 uracil-DNA glycosylase
       F7984_03055 mutY; A/G-specific adenine glycosylase
       F7984_11325 nth; endonuclease III
       F7984_10265 ATP-dependent DNA helicase
       F7984_17070 8-oxo-dGTP diphosphatase
       F7984_07465 8-oxo-dGTP diphosphatase
       F7984_15690 ytkD; nucleoside triphosphatase YtkD
       F7984_14590 NUDIX hydrolase
       F7984_12775 NUDIX domain-containing protein
       F7984_08920 NUDIX domain-containing protein
       F7984_13550 NUDIX hydrolase
       F7984_04425 NUDIX domain-containing protein
       F7984_10260 dUTP diphosphatase
       F7984_10290 mismatch-specific DNA-glycosylase
       F7984_02415 DNA-3-methyladenine glycosylase 2 family protein
       F7984_15120 mutM; DNA-formamidopyrimidine glycosylase
       F7984_06505 Fpg/Nei family DNA glycosylase
       F7984_09940 xth; exodeoxyribonuclease III
       F7984_13710 deoxyribonuclease IV
       F7984_14230 recJ; single-stranded-DNA-specific exonuclease RecJ
       F7984_01925 ligA; NAD-dependent DNA ligase LigA
       F7984_03780 hypothetical protein
       F7984_15125 polA; DNA polymerase I
       F7984_17185 uvrA; excinuclease ABC subunit UvrA
       F7984_17190 uvrB; excinuclease ABC subunit UvrB
       F7984_14890 uvrC; excinuclease ABC subunit UvrC
       F7984_16635 AAA family ATPase
       F7984_01920 pcrA; DNA helicase PcrA
       F7984_05085 ATP-dependent helicase
       F7984_10345 AAA family ATPase
       F7984_00605 rpoC; DNA-directed RNA polymerase subunit beta'
       F7984_00790 DNA-directed RNA polymerase subunit alpha
       F7984_18165 rpoE; DNA-directed RNA polymerase subunit delta
       F7984_06540 DNA-directed RNA polymerase subunit omega
       F7984_00290 mfd; transcription-repair coupling factor
       F7984_08250 mutS; DNA mismatch repair protein MutS
       F7984_14925 endonuclease MutS2
       F7984_08255 mutL; DNA mismatch repair endonuclease MutL
       F7984_13250 exodeoxyribonuclease VII large subunit
       F7984_13245 xseB; exodeoxyribonuclease VII small subunit
       F7984_15200 dnaE; DNA polymerase III subunit alpha
       F7984_07015 PolC-type DNA polymerase III
       F7984_16680 dnaN; DNA polymerase III subunit beta
       F7984_00010 dnaN; DNA polymerase III subunit beta
       F7984_13940 holA; DNA polymerase III subunit delta
       F7984_00175 holB; DNA polymerase III subunit delta'
       F7984_09270 3'-5' exonuclease
       F7984_00105 dnaX; DNA polymerase III subunit gamma/tau
       F7984_17870 ssb; single-stranded DNA-binding protein
       F7984_18780 ssb; single-stranded DNA-binding protein
       F7984_14145 ATP-dependent RecD-like DNA helicase
       F7984_07205 recA; recombinase RecA
       F7984_14290 ruvA; Holliday junction branch migration protein RuvA
       F7984_14285 ruvB; Holliday junction branch migration DNA helicase RuvB
       F7984_06550 priA; primosomal protein N'
       F7984_04070 DNA repair exonuclease
       F7984_05820 DNA repair exonuclease
       F7984_00500 radA; DNA repair protein RadA
       F7984_00020 recF; DNA replication/repair protein RecF
       F7984_06630 recG; ATP-dependent DNA helicase RecG
       F7984_13790 recO; DNA repair protein RecO
       F7984_00115 recR; recombination protein RecR
       F7984_13215 recN; DNA repair protein RecN
       F7984_11310 recU; Holliday junction resolvase RecU
       F7984_04485 addA; helicase-exonuclease AddAB subunit AddA
       F7984_04480 addB; helicase-exonuclease AddAB subunit AddB
       F7984_05775 Ku protein
       F7984_05765 DNA ligase
       F7984_05770 DNA ligase D
       F7984_00035 gyrA; DNA gyrase subunit A
       F7984_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B
       F7984_06760 topA; type I DNA topoisomerase
       F7984_11525 HU family DNA-binding protein
       F7984_11640 ATP-dependent DNA helicase RecQ
       F7984_02410 recQ; DNA helicase RecQ
       F7984_13080 DNA polymerase IV
       F7984_11970 UV damage repair protein UvrX
       F7984_08780 lexA; transcriptional repressor LexA
       F7984_03035 recX; recombination regulator RecX
       F7984_14930 polX; DNA polymerase/3'-5' exonuclease PolX
       F7984_11355 hypothetical protein
       F7984_09995 ribonucleoside-diphosphate reductase subunit alpha
       F7984_13390 vitamin B12-dependent ribonucleotide reductase
       F7984_09990 ribonucleotide-diphosphate reductase subunit beta
       F7984_07360 R2-like ligand-binding oxidase
       F7984_10240 R2-like ligand-binding oxidase
       F7984_15215 bifunctional oligoribonuclease/PAP phosphatase NrnA
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:3.6.4.12]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551 ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
K03547 sbcD; DNA repair protein SbcD/Mre11
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:3.1.-.- 3.6.4.12]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:3.1.-.- 3.6.4.12]
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03722 dinG; ATP-dependent DNA helicase DinG [EC:3.6.4.12]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
     03029 Mitochondrial biogenesis [BR:prd03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

[ KO | BRITE | KEGG2 | KEGG ]
Last updated: August 5, 2020