09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:rlu03030]
03410 Base excision repair [PATH:rlu03410]
RLEG12_28580 endonuclease III RLEG12_26205 uracil-DNA glycosylase RLEG12_14595 adenine glycosylase RLEG12_26800 3-methyladenine DNA glycosylase RLEG12_33225 5-hydroxymethyluracil DNA glycosylase RLEG12_29200 DNA-3-methyladenine glycosidase RLEG12_13675 3-methyladenine DNA glycosylase RLEG12_24780 DNA polymerase RLEG12_16030 DNA polymerase RLEG12_03030 DNA polymerase RLEG12_18055 exodeoxyribonuclease III RLEG12_30350 exodeoxyribonuclease III RLEG12_18855 exodeoxyribonuclease III RLEG12_32090 DNA polymerase I RLEG12_19195 single-stranded DNA exonuclease RLEG12_24015 NAD-dependent DNA ligase LigA
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
03420 Nucleotide excision repair [PATH:rlu03420]
03430 Mismatch repair [PATH:rlu03430]
03440 Homologous recombination [PATH:rlu03440]
03450 Non-homologous end-joining [PATH:rlu03450]
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:rlu03000]
03021 Transcription machinery [BR:rlu03021]
03019 Messenger RNA biogenesis [BR:rlu03019]
03041 Spliceosome
03011 Ribosome [BR:rlu03011]
03009 Ribosome biogenesis [BR:rlu03009]
03016 Transfer RNA biogenesis [BR:rlu03016]
03012 Translation factors [BR:rlu03012]
03110 Chaperones and folding catalysts [BR:rlu03110]
04131 Membrane trafficking [BR:rlu04131]
04121 Ubiquitin system
03051 Proteasome
03032 DNA replication proteins [BR:rlu03032]
03036 Chromosome and associated proteins [BR:rlu03036]
03400 DNA repair and recombination proteins [BR:rlu03400]
RLEG12_32770 methylated-DNA--protein-cysteine methyltransferase RLEG12_18365 deoxyribodipyrimidine photo-lyase RLEG12_26205 uracil-DNA glycosylase RLEG12_26800 3-methyladenine DNA glycosylase RLEG12_14595 adenine glycosylase RLEG12_28580 endonuclease III RLEG12_29105 NTP pyrophosphohydrolase RLEG12_20930 DNA mismatch repair protein MutT RLEG12_30085 hydrolase RLEG12_33105 deoxyuridine 5'-triphosphate nucleotidohydrolase RLEG12_11655 6-O-methylguanine DNA methyltransferase RLEG12_28570 6-O-methylguanine-DNA methyltransferase RLEG12_31470 dioxygenase RLEG12_24780 DNA polymerase RLEG12_16030 DNA polymerase RLEG12_03030 DNA polymerase RLEG12_29200 DNA-3-methyladenine glycosidase RLEG12_13675 3-methyladenine DNA glycosylase RLEG12_33225 5-hydroxymethyluracil DNA glycosylase RLEG12_18055 exodeoxyribonuclease III RLEG12_30350 exodeoxyribonuclease III RLEG12_18855 exodeoxyribonuclease III RLEG12_19195 single-stranded DNA exonuclease RLEG12_24015 NAD-dependent DNA ligase LigA RLEG12_32090 DNA polymerase I RLEG12_20035 excinuclease ABC subunit A RLEG12_22565 excinuclease ABC subunit B RLEG12_16775 excinuclease ABC subunit C RLEG12_12475 ATP-dependent DNA helicase RLEG12_23930 ATP-dependent DNA helicase RLEG12_17730 rpoB; DNA-directed RNA polymerase subunit beta RLEG12_17735 DNA-directed RNA polymerase subunit beta' RLEG12_17890 DNA-directed RNA polymerase subunit alpha RLEG12_16330 DNA-directed RNA polymerase subunit omega RLEG12_19970 transcription-repair coupling factor RLEG12_11480 DNA mismatch repair protein MutS RLEG12_13855 DNA mismatch repair protein MutL RLEG12_32720 exodeoxyribonuclease VII large subunit RLEG12_14200 exodeoxyribonuclease VII small subunit RLEG12_17500 DNA polymerase III subunit alpha RLEG12_32945 DNA polymerase III subunit beta RLEG12_16695 DNA polymerase III subunit chi RLEG12_31235 DNA polymerase III subunit delta RLEG12_20305 DNA polymerase III subunit delta' RLEG12_24000 DNA polymerase III subunit epsilon RLEG12_02085 DNA polymerase III subunit epsilon RLEG12_31300 DNA polymerase III subunit epsilon RLEG12_31950 DNA polymerase III subunit gamma/tau RLEG12_20040 single-stranded DNA-binding protein RLEG12_21215 recombinase RecA RLEG12_27595 Holliday junction DNA helicase RuvA RLEG12_27600 ruvB; Holliday junction DNA helicase RuvB RLEG12_27580 Holliday junction resolvase RLEG12_29725 primosome assembly protein PriA RLEG12_16560 DNA repair protein RadA RLEG12_32025 recombinase RecF RLEG12_19960 ATP-dependent DNA helicase RecG RLEG12_16380 DNA repair protein RecO RLEG12_31930 recombinase RecR RLEG12_24025 DNA repair protein RecN RLEG12_31405 ATP-dependent DNA helicase RLEG12_31410 exonuclease RecB RLEG12_15440 hypothetical protein RLEG12_12730 DNA repair protein RLEG12_12735 DNA helicase RLEG12_09170 DNA helicase RLEG12_09175 DNA repair protein RLEG12_02405 ATP-dependent DNA ligase RLEG12_18745 ATP-dependent DNA ligase RLEG12_29475 ATP-dependent DNA ligase RLEG12_02295 ATP-dependent DNA ligase RLEG12_03070 DNA ligase RLEG12_20050 DNA gyrase subunit A RLEG12_31335 gyrB; DNA gyrase subunit B RLEG12_17560 DNA topoisomerase I RLEG12_03075 DNA topoisomerase RLEG12_17315 transcriptional regulator RLEG12_17040 integration host factor subunit alpha RLEG12_11535 integration host factor subunit beta RLEG12_24710 ATP-dependent DNA helicase RecQ RLEG12_17510 DNA polymerase IV RLEG12_09525 DNA polymerase IV RLEG12_19470 LexA family transcriptional regulator RLEG12_09215 hypothetical protein RLEG12_31045 hypothetical protein RLEG12_09220 nucleotidyltransferase RLEG12_31040 DNA-repair protein RLEG12_09225 DNA polymerase RLEG12_31035 DNA polymerase RLEG12_32600 recombinase RecX RLEG12_12340 helicase RLEG12_28805 ribonucleotide-diphosphate reductase subunit alpha RLEG12_18205 ribonucleotide-diphosphate reductase subunit alpha RLEG12_28800 ribonucleotide-diphosphate reductase subunit beta
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03555 mutS; DNA mismatch repair protein MutS K03572 mutL; DNA mismatch repair protein MutL K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] K06915 herA; DNA double-strand break repair helicase HerA and related ATPase K10979 ku; DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K04764 ihfA; integration host factor subunit alpha K05788 ihfB; integration host factor subunit beta K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K01356 lexA; repressor LexA [EC:3.4.21.88] K14160 imuA; protein ImuA K14160 imuA; protein ImuA K14161 imuB; protein ImuB K14161 imuB; protein ImuB K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K03565 recX; regulatory protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
03029 Mitochondrial biogenesis [BR:rlu03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Rhizobium leguminosarum bv. trifolii CB782 KEGG Orthology (KO) - Rhizobium leguminosarum bv. trifolii CB782