KEGG Orthology (KO) - Rhizobium leguminosarum bv. trifolii CB782

[ Brite menu | Organism menu | Download htext | Download json ]

1st Level  2nd Level  3rd Level  4th Level 

     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:rlu03030]
     03410 Base excision repair [PATH:rlu03410]
       RLEG12_33225 5-hydroxymethyluracil DNA glycosylase
       RLEG12_28580 endonuclease III
       RLEG12_29200 DNA-3-methyladenine glycosidase
       RLEG12_13675 3-methyladenine DNA glycosylase
       RLEG12_24780 DNA polymerase
       RLEG12_16030 DNA polymerase
       RLEG12_03030 DNA polymerase
       RLEG12_26205 uracil-DNA glycosylase
       RLEG12_14595 adenine glycosylase
       RLEG12_26800 3-methyladenine DNA glycosylase
       RLEG12_18055 exodeoxyribonuclease III
       RLEG12_30350 exodeoxyribonuclease III
       RLEG12_18855 exodeoxyribonuclease III
       RLEG12_32090 DNA polymerase I
       RLEG12_19195 single-stranded DNA exonuclease
       RLEG12_24015 NAD-dependent DNA ligase LigA
       RLEG12_15355 ATP-dependent DNA ligase
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
     03420 Nucleotide excision repair [PATH:rlu03420]
     03430 Mismatch repair [PATH:rlu03430]
     03440 Homologous recombination [PATH:rlu03440]
     03450 Non-homologous end-joining [PATH:rlu03450]
     03460 Fanconi anemia pathway
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:rlu03000]
     03021 Transcription machinery [BR:rlu03021]
     03019 Messenger RNA biogenesis [BR:rlu03019]
     03041 Spliceosome
     03011 Ribosome [BR:rlu03011]
     03009 Ribosome biogenesis [BR:rlu03009]
     03016 Transfer RNA biogenesis [BR:rlu03016]
     03012 Translation factors [BR:rlu03012]
     03110 Chaperones and folding catalysts [BR:rlu03110]
     04131 Membrane trafficking [BR:rlu04131]
     04121 Ubiquitin system
     03051 Proteasome
     03032 DNA replication proteins [BR:rlu03032]
     03036 Chromosome and associated proteins [BR:rlu03036]
     03400 DNA repair and recombination proteins [BR:rlu03400]
       RLEG12_32770 methylated-DNA--protein-cysteine methyltransferase
       RLEG12_18365 deoxyribodipyrimidine photo-lyase
       RLEG12_26205 uracil-DNA glycosylase
       RLEG12_26800 3-methyladenine DNA glycosylase
       RLEG12_14595 adenine glycosylase
       RLEG12_28580 endonuclease III
       RLEG12_15355 ATP-dependent DNA ligase
       RLEG12_29105 NTP pyrophosphohydrolase
       RLEG12_20930 DNA mismatch repair protein MutT
       RLEG12_30085 hydrolase
       RLEG12_33105 deoxyuridine 5'-triphosphate nucleotidohydrolase
       RLEG12_11655 6-O-methylguanine DNA methyltransferase
       RLEG12_28570 6-O-methylguanine-DNA methyltransferase
       RLEG12_31470 dioxygenase
       RLEG12_24780 DNA polymerase
       RLEG12_16030 DNA polymerase
       RLEG12_03030 DNA polymerase
       RLEG12_29200 DNA-3-methyladenine glycosidase
       RLEG12_13675 3-methyladenine DNA glycosylase
       RLEG12_33225 5-hydroxymethyluracil DNA glycosylase
       RLEG12_18055 exodeoxyribonuclease III
       RLEG12_30350 exodeoxyribonuclease III
       RLEG12_18855 exodeoxyribonuclease III
       RLEG12_19195 single-stranded DNA exonuclease
       RLEG12_24015 NAD-dependent DNA ligase LigA
       RLEG12_32090 DNA polymerase I
       RLEG12_20035 excinuclease ABC subunit A
       RLEG12_22565 excinuclease ABC subunit B
       RLEG12_16775 excinuclease ABC subunit C
       RLEG12_12475 ATP-dependent DNA helicase
       RLEG12_23930 ATP-dependent DNA helicase
       RLEG12_17730 rpoB; DNA-directed RNA polymerase subunit beta
       RLEG12_17735 DNA-directed RNA polymerase subunit beta'
       RLEG12_17890 DNA-directed RNA polymerase subunit alpha
       RLEG12_16330 DNA-directed RNA polymerase subunit omega
       RLEG12_19970 transcription-repair coupling factor
       RLEG12_11480 DNA mismatch repair protein MutS
       RLEG12_13855 DNA mismatch repair protein MutL
       RLEG12_32720 exodeoxyribonuclease VII large subunit
       RLEG12_14200 exodeoxyribonuclease VII small subunit
       RLEG12_17500 DNA polymerase III subunit alpha
       RLEG12_32945 DNA polymerase III subunit beta
       RLEG12_16695 DNA polymerase III subunit chi
       RLEG12_31235 DNA polymerase III subunit delta
       RLEG12_20305 DNA polymerase III subunit delta'
       RLEG12_24000 DNA polymerase III subunit epsilon
       RLEG12_02085 DNA polymerase III subunit epsilon
       RLEG12_31300 DNA polymerase III subunit epsilon
       RLEG12_31950 DNA polymerase III subunit gamma/tau
       RLEG12_20040 single-stranded DNA-binding protein
       RLEG12_21215 recombinase RecA
       RLEG12_27595 Holliday junction DNA helicase RuvA
       RLEG12_27600 ruvB; Holliday junction DNA helicase RuvB
       RLEG12_27580 Holliday junction resolvase
       RLEG12_29725 primosome assembly protein PriA
       RLEG12_16560 DNA repair protein RadA
       RLEG12_32025 recombinase RecF
       RLEG12_19960 ATP-dependent DNA helicase RecG
       RLEG12_16380 DNA repair protein RecO
       RLEG12_31930 recombinase RecR
       RLEG12_24025 DNA repair protein RecN
       RLEG12_31405 ATP-dependent DNA helicase
       RLEG12_31410 exonuclease RecB
       RLEG12_12730 DNA repair protein
       RLEG12_12735 DNA helicase
       RLEG12_09170 DNA helicase
       RLEG12_09175 DNA repair protein
       RLEG12_02405 ATP-dependent DNA ligase
       RLEG12_18745 ATP-dependent DNA ligase
       RLEG12_29475 ATP-dependent DNA ligase
       RLEG12_02295 ATP-dependent DNA ligase
       RLEG12_03070 DNA ligase
       RLEG12_20050 DNA gyrase subunit A
       RLEG12_31335 gyrB; DNA gyrase subunit B
       RLEG12_17560 DNA topoisomerase I
       RLEG12_03075 DNA topoisomerase
       RLEG12_17315 transcriptional regulator
       RLEG12_17040 integration host factor subunit alpha
       RLEG12_11535 integration host factor subunit beta
       RLEG12_24710 ATP-dependent DNA helicase RecQ
       RLEG12_17510 DNA polymerase IV
       RLEG12_09525 DNA polymerase IV
       RLEG12_19470 LexA family transcriptional regulator
       RLEG12_09215 hypothetical protein
       RLEG12_31045 hypothetical protein
       RLEG12_09220 nucleotidyltransferase
       RLEG12_31040 DNA-repair protein
       RLEG12_09225 DNA polymerase
       RLEG12_31035 DNA polymerase
       RLEG12_32600 recombinase RecX
       RLEG12_12340 helicase
       RLEG12_28805 ribonucleotide-diphosphate reductase subunit alpha
       RLEG12_18205 ribonucleotide-diphosphate reductase subunit alpha
       RLEG12_28800 ribonucleotide-diphosphate reductase subunit beta
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phrB; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551 ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:3.1.-.- 3.6.4.12]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:3.1.-.- 3.6.4.12]
K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14160 imuA; protein ImuA
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
     03029 Mitochondrial biogenesis [BR:rlu03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

[ KO | BRITE | KEGG2 | KEGG ]
Last updated: June 4, 2020