KEGG Orthology (KO) - Rhodococcus opacus PD630

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
     00230 Purine metabolism [PATH:roa00230]
     00240 Pyrimidine metabolism [PATH:roa00240]
       Pd630_LPD03896 Carbamoyl-phosphate synthase large chain
       Pd630_LPD03894 Carbamoyl-phosphate synthase small chain
       Pd630_LPD03891 Aspartate carbamoyltransferase
       Pd630_LPD03892 Dihydroorotase
       Pd630_LPD04974 Dihydroorotate dehydrogenase (quinone)
       Pd630_LPD02101 Orotate phosphoribosyltransferase
       Pd630_LPD03897 Orotidine 5'-phosphate decarboxylase
       Pd630_LPD03237 Uridylate kinase
       Pd630_LPD05425 Nucleoside diphosphate kinase
       Pd630_LPD05016 CTP synthase
       Pd630_LPD05009 Cytidylate kinase
       Pd630_LPD01952 Deoxycytidine triphosphate deaminase
       Pd630_LPD00525 Endonuclease YhcR
       Pd630_LPD04287 Uracil phosphoribosyltransferase
       Pd630_LPD02911 Uracil phosphoribosyltransferase
       Pd630_LPD03890 Bifunctional protein pyrR
       Pd630_LPD06976 N-carbamoyl-L-amino acid hydrolase
       Pd630_LPD01826 Barbiturase
       Pd630_LPD01827 Putative amidase
       Pd630_LPD05942 NAD(P)H-flavin reductase RutF
       Pd630_LPD07694 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
       Pd630_LPD01672 Cytosine deaminase
       Pd630_LPD03107 Ribonucleoside-diphosphate reductase subunit alpha
       Pd630_LPD03108 Ribonucleoside-diphosphate reductase subunit beta nrdF2
       Pd630_LPD02868 R2-like ligand binding oxidase
       Pd630_LPD03452 Deoxyuridine 5'-triphosphate nucleotidohydrolase
       Pd630_LPD06430 Thymidylate synthase
       Pd630_LPD03365 Thymidylate synthase thyX
       Pd630_LPD02900 Cytidine deaminase
       Pd630_LPD02901 Thymidine phosphorylase
       Pd630_LPD02913 Purine nucleoside phosphorylase
       Pd630_LPD02987 Thymidylate kinase
K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
K01465 URA4; dihydroorotase [EC:3.5.2.3]
K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
K09903 pyrH; uridylate kinase [EC:2.7.4.22]
K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
K01937 pyrG; CTP synthase [EC:6.3.4.2]
K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
K01494 dcd; dCTP deaminase [EC:3.5.4.13]
K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
K19794 bar; barbiturase [EC:3.5.2.1]
K19795 E3.5.1.95; ureidomalonase [EC:3.5.1.95]
K09024 rutF; flavin reductase [EC:1.5.1.-]
K09020 rutB; ureidoacrylate peracid hydrolase [EC:3.5.1.110]
K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K00560 thyA; thymidylate synthase [EC:2.1.1.45]
K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
K01489 cdd; cytidine deaminase [EC:3.5.4.5]
K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
K00943 tmk; dTMP kinase [EC:2.7.4.9]
 
   09105 Amino acid metabolism
 
   09106 Metabolism of other amino acids
 
   09107 Glycan biosynthesis and metabolism
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:roa03000]
     03021 Transcription machinery [BR:roa03021]
     03019 Messenger RNA biogenesis [BR:roa03019]
     03041 Spliceosome
     03011 Ribosome [BR:roa03011]
     03009 Ribosome biogenesis [BR:roa03009]
     03016 Transfer RNA biogenesis [BR:roa03016]
     03012 Translation factors [BR:roa03012]
     03110 Chaperones and folding catalysts [BR:roa03110]
     04131 Membrane trafficking [BR:roa04131]
     04121 Ubiquitin system [BR:roa04121]
     03051 Proteasome [BR:roa03051]
     03032 DNA replication proteins [BR:roa03032]
     03036 Chromosome and associated proteins [BR:roa03036]
     03400 DNA repair and recombination proteins [BR:roa03400]
       Pd630_LPD06524 Methylated-DNA--protein-cysteine methyltransferase
       Pd630_LPD06526 Methylated-DNA--protein-cysteine methyltransferase
       Pd630_LPD02150 Methylated-DNA--protein-cysteine methyltransferase
       Pd630_LPD01519 Deoxyribodipyrimidine photo-lyase
       Pd630_LPD03182 Uracil-DNA glycosylase
       Pd630_LPD05029 Putative 3-methyladenine DNA glycosylase
       Pd630_LPD00892 A/G-specific adenine DNA glycosylase
       Pd630_LPD00769 Endonuclease III
       Pd630_LPD05785 putative DNA ligase
       Pd630_LPD01465 putative DNA repair helicase RAD25
       Pd630_LPD02562 Putative mutator mutT2 protein
       Pd630_LPD06374 Putative mutator mutT3 protein
       Pd630_LPD07669 putative mutator mutT1 protein
       Pd630_LPD05132 hypothetical protein
       Pd630_LPD03452 Deoxyuridine 5'-triphosphate nucleotidohydrolase
       Pd630_LPD06522 Alpha-ketoglutarate-dependent dioxygenase AlkB
       Pd630_LPD02524 G/U mismatch-specific DNA glycosylase
       Pd630_LPD00380 DNA polymerase
       Pd630_LPD02574 Uncharacterized protein
       Pd630_LPD06521 putative bifunctional transcriptional activator/DNA repair enzyme AlkA
       Pd630_LPD02608 putative GMP synthase [glutamine-hydrolyzing]
       Pd630_LPD03194 Formamidopyrimidine-DNA glycosylase
       Pd630_LPD06428 Formamidopyrimidine-DNA glycosylase
       Pd630_LPD02926 Putative DNA glycosylase
       Pd630_LPD05495 Putative DNA glycosylase
       Pd630_LPD04331 DNA-(apurinic or apyrimidinic site) lyase
       Pd630_LPD02891 DNA-(apurinic or apyrimidinic site) lyase
       Pd630_LPD06361 Exodeoxyribonuclease III
       Pd630_LPD06062 putative endonuclease 4
       Pd630_LPD03134 DNA ligase
       Pd630_LPD05078 DNA polymerase I
       Pd630_LPD06519 DNA polymerase I
       Pd630_LPD04415 excinuclease ABC
       Pd630_LPD05054 UvrABC system protein A
       Pd630_LPD05062 UvrABC system protein B
       Pd630_LPD03920 UvrABC system protein C
       Pd630_LPD03043 ATP-dependent DNA helicase pcrA
       Pd630_LPD03048 putative DNA helicase II
       Pd630_LPD02168 ATP-dependent DNA helicase pcrA
       Pd630_LPD06132 DNA-directed RNA polymerase subunit beta
       Pd630_LPD06131 DNA-directed RNA polymerase subunit beta'
       Pd630_LPD02804 DNA-directed RNA polymerase subunit alpha
       Pd630_LPD03900 DNA-directed RNA polymerase subunit omega
       Pd630_LPD02376 Transcription-repair-coupling factor
       Pd630_LPD02495 Exodeoxyribonuclease 7 large subunit
       Pd630_LPD02494 Exodeoxyribonuclease 7 small subunit
       Pd630_LPD05163 DNA polymerase III subunit alpha
       Pd630_LPD00002 DNA polymerase III subunit beta
       Pd630_LPD05387 hypothetical protein
       Pd630_LPD00801 DNA polymerase III subunit gamma/tau
       Pd630_LPD05998 Tellurium resistance protein TerD
       Pd630_LPD05222 Uncharacterized protein
       Pd630_LPD01623 DNA polymerase III polC-type
       Pd630_LPD11031 DNA polymerase III polC-type
       Pd630_LPD01029 putative ATP-dependent helicase dinG
       Pd630_LPD00599 DNA polymerase III subunit gamma/tau
       Pd630_LPD00600 DNA polymerase III subunit gamma/tau
       Pd630_LPD05515 Single-stranded DNA-binding protein
       Pd630_LPD07778 Single-stranded DNA-binding protein
       Pd630_LPD00548 NaeI very short patch repair endonuclease
       Pd630_LPD06003 Exodeoxyribonuclease V beta chain
       Pd630_LPD06004 Exodeoxyribonuclease V gamma chain
       Pd630_LPD06002 Exodeoxyribonuclease V alpha chain
       Pd630_LPD03385 Protein RecA
       Pd630_LPD03519 Holliday junction ATP-dependent DNA helicase ruvA
       Pd630_LPD03520 Holliday junction ATP-dependent DNA helicase RuvB
       Pd630_LPD03518 Crossover junction endodeoxyribonuclease ruvC
       Pd630_LPD03903 Putative primosomal protein N'
       Pd630_LPD02502 Nuclease sbcCD subunit C
       Pd630_LPD02501 Nuclease sbcCD subunit D
       Pd630_LPD00902 DNA repair protein RadA
       Pd630_LPD00004 DNA replication and repair protein recF
       Pd630_LPD03186 ATP-dependent DNA helicase recG
       Pd630_LPD05326 DNA repair protein recO
       Pd630_LPD00612 Recombination protein recR
       Pd630_LPD05019 DNA repair protein recN
       Pd630_LPD03951 putative DNA repair protein
       Pd630_LPD04033 Putative DNA ligase-like protein
       Pd630_LPD01566 Putative DNA ligase-like protein
       Pd630_LPD09135 Putative DNA ligase-like protein
       Pd630_LPD11016 putative thermostable DNA ligase
       Pd630_LPD00016 DNA gyrase subunit A
       Pd630_LPD00009 DNA gyrase subunit B
       Pd630_LPD00800 DNA topoisomerase 1
       Pd630_LPD03169 DNA-binding protein HU
       Pd630_LPD05408 putative ATP-dependent DNA helicase recQ
       Pd630_LPD05171 DNA polymerase IV 1
       Pd630_LPD05856 DNA polymerase IV 2
       Pd630_LPD05501 DNA polymerase IV 2
       Pd630_LPD03863 hypothetical protein
       Pd630_LPD03409 LexA repressor
       Pd630_LPD03733 LexA repressor 1
       Pd630_LPD02864 DNA polymerase IV
       Pd630_LPD02878 Error-prone DNA polymerase
       Pd630_LPD03386 Regulatory protein recX
       Pd630_LPD05568 putative ATP-dependent helicase dinG
       Pd630_LPD02927 putative ATP-dependent helicase lhr
       Pd630_LPD03170 putative mutator mutT1 protein
       Pd630_LPD05015 ADP-ribose pyrophosphatase
       Pd630_LPD03107 Ribonucleoside-diphosphate reductase subunit alpha
       Pd630_LPD03108 Ribonucleoside-diphosphate reductase subunit beta nrdF2
       Pd630_LPD02868 R2-like ligand binding oxidase
       Pd630_LPD03313 Uncharacterized protein
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phrB; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:3.6.4.12]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551 ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:3.6.4.12]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
     03029 Mitochondrial biogenesis [BR:roa03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

[ KO | BRITE | KEGG2 | KEGG ]
Last updated: November 26, 2020