DNA Repair and Recombination Proteins - Rhodococcus opacus PD630

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     KO
 Eukaryotic type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
       DNA glycosylases
         Pd630_LPD03182 Uracil-DNA glycosylase
         Pd630_LPD05029 Putative 3-methyladenine DNA glycosylase
         Pd630_LPD00892 A/G-specific adenine DNA glycosylase
         Pd630_LPD00769 Endonuclease III
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] 
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] 
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] 
K10773 NTH; endonuclease III [EC:4.2.99.18] 
       AP endonucleases
       Long Patch-BER factors
       Short Patch-BER factors
       Other BER factors
     NER (nucleotide excision repair)
     MMR (mismatch excision repair)
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Check point factors
   Other factors with a suspected DNA repair function
 
 Prokaryotic type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
       DNA glycosylases
         Pd630_LPD03182 Uracil-DNA glycosylase
         Pd630_LPD02524 G/U mismatch-specific DNA glycosylase
         Pd630_LPD00380 DNA polymerase
         Pd630_LPD02574 Uncharacterized protein
         Pd630_LPD06521 putative bifunctional transcriptional activator/DNA repair enzyme AlkA
         Pd630_LPD05029 Putative 3-methyladenine DNA glycosylase
         Pd630_LPD00892 A/G-specific adenine DNA glycosylase
         Pd630_LPD02608 putative GMP synthase [glutamine-hydrolyzing]
         Pd630_LPD03194 Formamidopyrimidine-DNA glycosylase
         Pd630_LPD06428 Formamidopyrimidine-DNA glycosylase
         Pd630_LPD02926 Putative DNA glycosylase
         Pd630_LPD05495 Putative DNA glycosylase
         Pd630_LPD00769 Endonuclease III
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] 
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] 
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] 
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] 
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] 
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] 
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] 
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] 
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] 
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] 
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] 
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] 
K10773 NTH; endonuclease III [EC:4.2.99.18] 
       AP endonucleases
       RecJ
       DNA ligase
       DNA polymerase I
     NER (nucleotide excision repair)
     MMR (mismatch excision repair)
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Other factors with a suspected DNA repair function

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Last updated: October 14, 2020