DNA Repair and Recombination Proteins - Rhodococcus opacus PD630

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     KO
 Eukaryotic type
 
 Prokaryotic type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
     NER (nucleotide excision repair)
       GGR (global genome repair) factors
         Pd630_LPD04415 excinuclease ABC
         Pd630_LPD05054 UvrABC system protein A
         Pd630_LPD05062 UvrABC system protein B
         Pd630_LPD03920 UvrABC system protein C
         Pd630_LPD03043 ATP-dependent DNA helicase pcrA
         Pd630_LPD03048 putative DNA helicase II
         Pd630_LPD02168 ATP-dependent DNA helicase pcrA
         Pd630_LPD05078 DNA polymerase I
         Pd630_LPD06519 DNA polymerase I
         Pd630_LPD03134 DNA ligase
K03701 uvrA; excinuclease ABC subunit A 
K03701 uvrA; excinuclease ABC subunit A 
K03702 uvrB; excinuclease ABC subunit B 
K03703 uvrC; excinuclease ABC subunit C 
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] 
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] 
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] 
K02335 polA; DNA polymerase I [EC:2.7.7.7] 
K02335 polA; DNA polymerase I [EC:2.7.7.7] 
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
       TCR (transcription coupled repair) factors
     MMR (mismatch excision repair)
   DSBR (double strand breaks repair)
     HR (homologous recombination)
     NHEJ (non-homologous end-joining)
       Two-component NHEJ DNA repair complex
       SHIIR (short-homology-independent illegitimate recombination)
       SHDIR (short-homology-dependent illegitimate recombination)
         RecET pathway
         Facilitator
         Supressor
           Pd630_LPD05408 putative ATP-dependent DNA helicase recQ
           Pd630_LPD04415 excinuclease ABC
           Pd630_LPD05054 UvrABC system protein A
           Pd630_LPD05062 UvrABC system protein B
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12] 
K03701 uvrA; excinuclease ABC subunit A 
K03701 uvrA; excinuclease ABC subunit A 
K03702 uvrB; excinuclease ABC subunit B 
   TLS (translesion DNA synthesis) factors
   Other factors with a suspected DNA repair function

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Last updated: October 14, 2020