Messenger RNA Biogenesis - Rhinopithecus roxellana (golden snub-nosed monkey)

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     KO
 Eukaryotic type
   mRNA processing factors
   mRNA surveillance and transport factors
     Transport factors
     Surveillance factors
     Factors involved in mRNA localization
     mRNA cycle factors
       Common to processing body (P body) and stress granule
         104682193 XRN1; 5'-3' exoribonuclease 1 isoform X1
         104660145 AGO1; protein argonaute-1 isoform X3
         104660147 AGO3; protein argonaute-3 isoform X1
         104679747 AGO2; protein argonaute-2
         104660144 AGO4; LOW QUALITY PROTEIN: protein argonaute-4
         104664097 EIF4E; eukaryotic translation initiation factor 4E
         104680439 EIF4E1B; eukaryotic translation initiation factor 4E type 1B
         104655162 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1
         104680634 UPF1; regulator of nonsense transcripts 1 isoform X1
         104666837 DDX3X; ATP-dependent RNA helicase DDX3X isoform X1
         104657054 DDX3Y; ATP-dependent RNA helicase DDX3Y isoform X1
         104665586 DDX6; probable ATP-dependent RNA helicase DDX6
         104672918 MEX3C; RNA-binding E3 ubiquitin-protein ligase MEX3C
         104671449 MEX3D; RNA-binding protein MEX3D
         104671289 MEX3B; RNA-binding protein MEX3B
         104664925 MEX3A; RNA-binding protein MEX3A
         104675400 FASTK; fas-activated serine/threonine kinase isoform X1
         104659557 LSM14A; protein LSM14 homolog A isoform X2
         104663815 LSM14B; protein LSM14 homolog B isoform X1
         104659327 poly(rC)-binding protein 1-like
         115894358 PCBP1; poly(rC)-binding protein 1
         104670590 PCBP2; poly(rC)-binding protein 2 isoform X21
         104659652 LOW QUALITY PROTEIN: nuclease-sensitive element-binding protein 1
         104669061 YBX1; nuclease-sensitive element-binding protein 1
         104659563 WTIP; Wilms tumor protein 1-interacting protein isoform X1
         104674141 AJUBA; LIM domain-containing protein ajuba
         104671000 LIMD1; LIM domain-containing protein 1
         104681677 APOBEC1; C->U-editing enzyme APOBEC-1 isoform X1
         104682552 APOBEC3G; DNA dC->dU-editing enzyme APOBEC-3G
         108684023 APOBEC3C; DNA dC->dU-editing enzyme APOBEC-3C
         104682550 APOBEC3H; DNA dC->dU-editing enzyme APOBEC-3H isoform X3
         104682553 APOBEC3F; DNA dC->dU-editing enzyme APOBEC-3F isoform X3
         104682554 APOBEC3D; DNA dC->dU-editing enzyme APOBEC-3F
         104682555 APOBEC3B; DNA dC->dU-editing enzyme APOBEC-3B
         104682557 APOBEC3A; DNA dC->dU-editing enzyme APOBEC-3A
         104658922 MOV10; helicase MOV-10 isoform X1
         104656118 PNRC2; proline-rich nuclear receptor coactivator 2
         104674560 TNPO1; transportin-1 isoform X1
         104667848 serine/threonine-protein kinase SMG1 isoform X1
         104664922 SMG5; protein SMG5
         104682020 SMG6; telomerase-binding protein EST1A isoform X1
         104666802 SMG7; protein SMG7 isoform X1
         104676148 ZFP36; mRNA decay activator protein ZFP36
         104659625 ZFP36L1; mRNA decay activator protein ZFP36L1
         104677532 ZFP36L2; mRNA decay activator protein ZFP36L2
         104675753 LIN28A; protein lin-28 homolog A
         104653512 LIN28B; protein lin-28 homolog B isoform X1
         104678957 HTT; huntingtin isoform X1
         104658572 IPO8; LOW QUALITY PROTEIN: importin-8
         104665258 BICC1; protein bicaudal C homolog 1 isoform X1
         104677383 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X2
         104659891 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1
         104664279 heterogeneous nuclear ribonucleoprotein A1
         104666883 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1
         104672408 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1
         104670566 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1
         115894306 heterogeneous nuclear ribonucleoprotein A1-like
         115893491 heterogeneous nuclear ribonucleoprotein A1-like
         104676581 heterogeneous nuclear ribonucleoprotein A1-like
         104662061 PRKACG; cAMP-dependent protein kinase catalytic subunit gamma isoform X1
         104677489 PRKACB; cAMP-dependent protein kinase catalytic subunit beta isoform X1
         104661051 LOW QUALITY PROTEIN: cAMP-dependent protein kinase catalytic subunit alpha
         104660242 LARP1; la-related protein 1 isoform X1
         104674244 LARP1B; la-related protein 1B isoform X3
         104674605 ATXN2; ataxin-2 isoform X1
         104682147 ATXN2L; ataxin-2-like protein isoform X2
K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K11593 ELF2C; eukaryotic translation initiation factor 2C 
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K03259 EIF4E; translation initiation factor 4E 
K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] 
K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] 
K17642 DDX3Y; ATP-dependent RNA helicase DDX3Y [EC:5.6.2.7] 
K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] 
K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] 
K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8] 
K18749 LSM14; protein LSM14 
K18749 LSM14; protein LSM14 
K12889 PCBP1; poly(rC)-binding protein 1 
K12889 PCBP1; poly(rC)-binding protein 1 
K13162 PCBP2; poly(rC)-binding protein 2 
K09276 YBX1; Y-box-binding protein 1 
K09276 YBX1; Y-box-binding protein 1 
K16682 AJUBA; LIM domain-containing protein 
K16682 AJUBA; LIM domain-containing protein 
K16682 AJUBA; LIM domain-containing protein 
K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36] 
K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-] 
K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-] 
K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-] 
K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-] 
K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-] 
K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-] 
K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-] 
K18422 MOV10; helicase MOV-10 [EC:5.6.2.5] 
K18751 PNRC2; proline-rich nuclear receptor coactivator 2 
K18752 TNPO1; transportin-1 
K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] 
K11125 SMG5; protein SMG5 
K11124 SMG6; protein SMG6 [EC:3.1.-.-] 
K14409 SMG7; protein SMG7 
K15308 TTP; tristetraprolin 
K18753 ZFP36L; butyrate response factor 
K18753 ZFP36L; butyrate response factor 
K18754 LIN28; protein lin-28 
K18754 LIN28; protein lin-28 
K04533 HD; huntingtin 
K18755 IPO8; importin-8 
K18756 BICC1; protein bicaudal C 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3 
K04345 PKA; protein kinase A [EC:2.7.11.11] 
K04345 PKA; protein kinase A [EC:2.7.11.11] 
K04345 PKA; protein kinase A [EC:2.7.11.11] 
K18757 LARP1; la-related protein 1 
K18757 LARP1; la-related protein 1 
K23625 ATXN2_2L; ataxin 2/2L 
K23625 ATXN2_2L; ataxin 2/2L 
       P-body specific factors
       Stress granule specific factors
   mRNA degradation factors
 
 Prokaryotic type

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Last updated: April 9, 2024