KEGG Orthology (KO) - Salinibacterium sp. CGMCC 1.16371

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:salc03030]
     03410 Base excision repair [PATH:salc03410]
     03420 Nucleotide excision repair [PATH:salc03420]
     03430 Mismatch repair [PATH:salc03430]
     03440 Homologous recombination [PATH:salc03440]
     03450 Non-homologous end-joining [PATH:salc03450]
       C2138_08350 Ku protein
       C2138_08360 ATP-dependent DNA ligase
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
     03460 Fanconi anemia pathway
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:salc03000]
     03021 Transcription machinery [BR:salc03021]
     03019 Messenger RNA biogenesis [BR:salc03019]
     03041 Spliceosome
     03011 Ribosome [BR:salc03011]
     03009 Ribosome biogenesis [BR:salc03009]
     03016 Transfer RNA biogenesis [BR:salc03016]
     03012 Translation factors [BR:salc03012]
     03110 Chaperones and folding catalysts [BR:salc03110]
     04131 Membrane trafficking [BR:salc04131]
     04121 Ubiquitin system
     03051 Proteasome [BR:salc03051]
     03032 DNA replication proteins [BR:salc03032]
     03036 Chromosome and associated proteins [BR:salc03036]
     03400 DNA repair and recombination proteins [BR:salc03400]
       C2138_10170 cysteine methyltransferase
       C2138_03835 uracil-DNA glycosylase
       C2138_04690 hypothetical protein
       C2138_04695 DNA-3-methyladenine glycosylase
       C2138_04710 hypothetical protein
       C2138_04240 adenine glycosylase
       C2138_01720 helicase
       C2138_04855 NUDIX hydrolase
       C2138_07455 NUDIX hydrolase
       C2138_11630 DNA mismatch repair protein MutT
       C2138_07030 dUTP diphosphatase
       C2138_10165 3-methyladenine DNA glycosylase
       C2138_08850 DNA-formamidopyrimidine glycosylase
       C2138_11205 DNA glycosylase
       C2138_08050 DNA glycosylase
       C2138_02505 exodeoxyribonuclease III
       C2138_12565 xth; exodeoxyribonuclease III
       C2138_08505 DNA ligase (NAD(+)) LigA
       C2138_06590 DNA polymerase I
       C2138_07295 bifunctional 3'-5' exonuclease/DNA polymerase
       C2138_06525 excinuclease ABC subunit A
       C2138_06530 excinuclease ABC subunit B
       C2138_06520 excinuclease ABC subunit C
       C2138_03335 ATP-dependent DNA helicase
       C2138_01185 ATP-dependent DNA helicase PcrA
       C2138_11150 rpoB; DNA-directed RNA polymerase subunit beta
       C2138_11145 rpoC; DNA-directed RNA polymerase subunit beta'
       C2138_10875 DNA-directed RNA polymerase subunit alpha
       C2138_06725 DNA-directed RNA polymerase subunit omega
       C2138_09860 mfd; transcription-repair coupling factor
       C2138_09670 exodeoxyribonuclease VII large subunit
       C2138_09675 exodeoxyribonuclease VII small subunit
       C2138_05860 DNA polymerase III subunit alpha
       C2138_00010 DNA polymerase III subunit beta
       C2138_07570 holA; DNA polymerase III subunit delta
       C2138_02235 DNA polymerase III subunit delta'
       C2138_06355 DNA polymerase III subunit epsilon
       C2138_09105 DNA polymerase III subunit epsilon
       C2138_09635 DNA polymerase III subunit epsilon
       C2138_10420 DNA polymerase III subunit gamma and tau
       C2138_13460 single-stranded DNA-binding protein
       C2138_08240 single-stranded DNA-binding protein
       C2138_04535 recA; recombinase RecA
       C2138_06880 Holliday junction branch migration protein RuvA
       C2138_06875 Holliday junction branch migration DNA helicase RuvB
       C2138_06885 crossover junction endodeoxyribonuclease RuvC
       C2138_06710 hypothetical protein
       C2138_10205 ATPase
       C2138_10210 exonuclease sbcCD subunit D
       C2138_11375 DNA repair protein RadA
       C2138_00015 DNA replication/repair protein RecF
       C2138_08910 ATP-dependent DNA helicase RecG
       C2138_07465 DNA repair protein RecO
       C2138_10415 recombination protein RecR
       C2138_04790 recN; DNA repair protein RecN
       C2138_08350 Ku protein
       C2138_08360 ATP-dependent DNA ligase
       C2138_00030 DNA gyrase subunit A
       C2138_07055 DNA topoisomerase IV
       C2138_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B
       C2138_07060 DNA topoisomerase IV subunit B
       C2138_02225 topA; type I DNA topoisomerase
       C2138_05420 DNA topoisomerase
       C2138_13350 integration host factor
       C2138_02125 recombinase RecQ
       C2138_11760 recQ; DNA helicase RecQ
       C2138_08330 DNA polymerase IV
       C2138_04570 repressor LexA
       C2138_05635 DNA polymerase
       C2138_05630 error-prone DNA polymerase
       C2138_04540 RecX family transcriptional regulator
       C2138_01535 DNA mismatch repair protein MutT
       C2138_04800 ADP-ribose pyrophosphatase
       C2138_10125 ribonucleoside-diphosphate reductase subunit alpha
       C2138_10115 ribonucleotide-diphosphate reductase subunit beta
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:3.6.4.12]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551 ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
     03029 Mitochondrial biogenesis [BR:salc03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: September 22, 2020