KEGG Orthology (KO) - Salmonella enterica subsp. enterica serovar Newport SL254

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:see03000]
     03021 Transcription machinery [BR:see03021]
     03019 Messenger RNA biogenesis [BR:see03019]
     03041 Spliceosome
     03011 Ribosome [BR:see03011]
     03009 Ribosome biogenesis [BR:see03009]
       SNSL254_A2784 rnc; ribonuclease III
       SNSL254_A4711 oligoribonuclease
       SNSL254_A2783 era; GTP-binding protein Era
       SNSL254_A3562 GTP-binding protein Obg/CgtA
       SNSL254_A0203 dksA; RNA polymerase-binding protein DksA
       SNSL254_A3545 nusA; transcription termination/antitermination factor NusA
       SNSL254_A0465 nusB; transcription termination/antitermination factor NusB
       SNSL254_A4480 nusG; transcription termination/antitermination factor NusG
       SNSL254_A2416 rsuA; ribosomal small subunit pseudouridine synthase A
       SNSL254_A0095 ksgA; dimethyladenosine transferase
       SNSL254_A3677 sun; ribosomal RNA small subunit methyltransferase B
       SNSL254_A4912 ribosomal RNA small subunit methyltransferase C
       SNSL254_A3841 rsmD; RNA methyltransferase, RsmD family
       SNSL254_A3341 protein YggJ
       SNSL254_A1989 ribosomal RNA small subunit methyltransferase F
       SNSL254_A4156 gidB; 16S rRNA methyltransferase GidB
       SNSL254_A0132 mraW; S-adenosyl-methyltransferase MraW
       SNSL254_A3521 conserved hypothetical protein
       SNSL254_A3863 protein YhiQ
       SNSL254_A1975 ribosomal RNA large subunit methyltransferase A
       SNSL254_A4730 RNA methyltransferase
       SNSL254_A3556 rrmJ; ribosomal RNA large subunit methyltransferase J
       SNSL254_A0890 putative methyltransferase YbiN
       SNSL254_A3481 methyltransferase family protein
       SNSL254_A0697 conserved hypothetical protein
       SNSL254_A1121 protein YccW
       SNSL254_A3867 yhiR; DNA utilization protein YhiR
       SNSL254_A1102 putative RNA methylase family UPF0020
       SNSL254_A3205 conserved hypothetical protein
       SNSL254_A2720 radical SAM enzyme
       SNSL254_A3179 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA
       SNSL254_A0955 rumB; 23S rRNA (uracil-5-)-methyltransferase RumB
       SNSL254_A0101 pseudouridine synthase
       SNSL254_A1846 rluB; ribosomal large subunit pseudouridine synthase B
       SNSL254_A1284 ribosomal large subunit pseudouridine synthase C
       SNSL254_A2877 rluD; ribosomal large subunit pseudouridine synthase D
       SNSL254_A1338 ribosomal large subunit pseudouridine synthase E
       SNSL254_A4530 ribosomal large subunit pseudouridine synthase F
       SNSL254_A2860 RNA methyltransferase
       SNSL254_A4914 rimI; ribosomal-protein-alanine acetyltransferase
       SNSL254_A1264 ribosomal-protein-alanine acetyltransferase
       SNSL254_A0948 rimK; ribosomal protein S6 modification protein
       SNSL254_A1725 ribosomal-protein-serine acetyltransferase
       SNSL254_A2889 rimM; 16S rRNA processing protein RimM
       SNSL254_A0920 conserved hypothetical protein
       SNSL254_A1008 conserved hypothetical protein
       SNSL254_A3646 prmA; ribosomal protein L11 methyltransferase
       SNSL254_A1330 cupin family protein
       SNSL254_A1282 ribonuclease E
       SNSL254_A3633 cafA; ribonuclease G
       SNSL254_A3536 deaD; cold-shock DEAD box protein A
       SNSL254_A1775 ATP-independent RNA helicase DbpA
       SNSL254_A2855 ATP-dependent RNA helicase SrmB
       SNSL254_A4710 rsgA; ribosome small subunit-dependent GTPase A
       SNSL254_A2713 engA; ribosome-associated GTPase EngA
       SNSL254_A4723 hflX; GTP-binding protein HflX
       SNSL254_A3671 Sua5/YciO/YrdC/YwlC family protein
       SNSL254_A4022 GTP pyrophosphokinase
       SNSL254_A3543 rbfA; ribosome-binding factor A
       SNSL254_A3546 conserved hypothetical protein
       SNSL254_A0594 conserved domain protein
       SNSL254_A0698 iojap family protein
       SNSL254_A0727 conserved hypothetical protein
       SNSL254_A3557 putative RNA-binding protein
       SNSL254_A3967 conserved hypothetical protein
       SNSL254_A4782 yjgA; YjgA protein
       SNSL254_A3582 yfiA; ribosomal subunit interface protein
       SNSL254_A2879 ribosomal subunit interface protein
       SNSL254_A1917 engD; GTP-binding protein EngD
K03685 rnc; ribonuclease III [EC:3.1.26.3]
K13288 orn; oligoribonuclease [EC:3.1.-.-]
K03595 era; GTPase
K03979 obgE; GTPase [EC:3.6.5.-]
K06204 dksA; DnaK suppressor protein
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
K12297 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase / 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.173 2.1.1.264]
K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
K02860 rimM; 16S rRNA processing protein RimM
K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
K08300 rne; ribonuclease E [EC:3.1.26.12]
K08301 rng; ribonuclease G [EC:3.1.26.-]
K05592 deaD; ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:3.6.4.13]
K05590 srmB; ATP-dependent RNA helicase SrmB [EC:3.6.4.13]
K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
K03977 engA; GTPase
K03665 hflX; GTPase
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
K02834 rbfA; ribosome-binding factor A
K09748 rimP; ribosome maturation factor RimP
K14761 ybcJ; ribosome-associated protein
K09710 ybeB; ribosome-associated protein
K07042 ybeY; probable rRNA maturation factor
K07574 yhbY; RNA-binding protein
K14762 yibL; ribosome-associated protein
K09889 yjgA; ribosome-associated protein
K05808 yhbH; putative sigma-54 modulation protein
K05809 raiA; ribosome-associated inhibitor A
K06942 ychF; ribosome-binding ATPase
     03016 Transfer RNA biogenesis [BR:see03016]
     03012 Translation factors [BR:see03012]
     03110 Chaperones and folding catalysts [BR:see03110]
     04131 Membrane trafficking [BR:see04131]
     04121 Ubiquitin system [BR:see04121]
     03051 Proteasome [BR:see03051]
     03032 DNA replication proteins [BR:see03032]
     03036 Chromosome and associated proteins [BR:see03036]
     03400 DNA repair and recombination proteins [BR:see03400]
     03029 Mitochondrial biogenesis [BR:see03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: August 7, 2020