KEGG Orthology (KO) - Shewanella khirikhana

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
 
   09106 Metabolism of other amino acids
     00410 beta-Alanine metabolism [PATH:skh00410]
     00430 Taurine and hypotaurine metabolism [PATH:skh00430]
     00440 Phosphonate and phosphinate metabolism
     00450 Selenocompound metabolism [PATH:skh00450]
     00460 Cyanoamino acid metabolism [PATH:skh00460]
     00471 D-Glutamine and D-glutamate metabolism [PATH:skh00471]
     00472 D-Arginine and D-ornithine metabolism
     00473 D-Alanine metabolism [PATH:skh00473]
       STH12_02977 alr; Alanine racemase, biosynthetic
       STH12_01593 ddl_1; D-alanine--D-alanine ligase
K01775 alr; alanine racemase [EC:5.1.1.1]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
     00480 Glutathione metabolism [PATH:skh00480]
 
   09107 Glycan biosynthesis and metabolism
     00510 N-Glycan biosynthesis
     00513 Various types of N-glycan biosynthesis
     00512 Mucin type O-glycan biosynthesis
     00515 Mannose type O-glycan biosynthesis
     00514 Other types of O-glycan biosynthesis
     00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
     00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
     00533 Glycosaminoglycan biosynthesis - keratan sulfate
     00531 Glycosaminoglycan degradation
     00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
     00601 Glycosphingolipid biosynthesis - lacto and neolacto series
     00603 Glycosphingolipid biosynthesis - globo and isoglobo series
     00604 Glycosphingolipid biosynthesis - ganglio series
     00540 Lipopolysaccharide biosynthesis [PATH:skh00540]
     00541 O-Antigen nucleotide sugar biosynthesis [PATH:skh00541]
     00550 Peptidoglycan biosynthesis [PATH:skh00550]
       STH12_02996 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       STH12_03891 murB; UDP-N-acetylenolpyruvoylglucosamine reductase
       STH12_04045 murC; UDP-N-acetylmuramate--L-alanine ligase
       STH12_04042 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase
       STH12_04039 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
       STH12_01593 ddl_1; D-alanine--D-alanine ligase
       STH12_04040 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
       STH12_00698 ispU; Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific)
       STH12_00359 uppP; Undecaprenyl-diphosphatase
       STH12_03114 undecaprenyl pyrophosphate phosphatase
       STH12_04041 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase
       STH12_04044 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
       STH12_00265 pbpG_1; Penicillin-binding protein 2D
       STH12_03306 mrcA; Penicillin-binding protein 1A
       STH12_02874 mrcB; Penicillin-binding protein 1B
       STH12_02391 spoVD; Stage V sporulation protein D
       STH12_04038 ftsI; Peptidoglycan synthase FtsI precursor
       STH12_02395 dacA; D-alanyl-D-alanine carboxypeptidase DacA precursor
       STH12_01421 dacB; D-alanyl-D-alanine carboxypeptidase DacB precursor
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.1.129]
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.1.129 3.4.16.4]
K05365 mrcB; penicillin-binding protein 1B [EC:2.4.1.129 3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
     00511 Other glycan degradation [PATH:skh00511]
     00571 Lipoarabinomannan (LAM) biosynthesis
     00572 Arabinogalactan biosynthesis - Mycobacterium
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
   09161 Cancer: overview
 
   09162 Cancer: specific types
 
   09163 Immune disease
 
   09164 Neurodegenerative disease
 
   09165 Substance dependence
 
   09166 Cardiovascular disease
 
   09167 Endocrine and metabolic disease
 
   09171 Infectious disease: bacterial
 
   09172 Infectious disease: viral
 
   09174 Infectious disease: parasitic
 
   09175 Drug resistance: antimicrobial
     01501 beta-Lactam resistance [PATH:skh01501]
     01502 Vancomycin resistance [PATH:skh01502]
       STH12_01593 ddl_1; D-alanine--D-alanine ligase
       STH12_02977 alr; Alanine racemase, biosynthetic
       STH12_04040 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
       STH12_04041 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase
       STH12_04044 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
     01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:skh01503]
 
   09176 Drug resistance: antineoplastic
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
     01000 Enzymes [BR:skh01000]
     01001 Protein kinases [BR:skh01001]
     01009 Protein phosphatases and associated proteins [BR:skh01009]
     01002 Peptidases and inhibitors [BR:skh01002]
     01003 Glycosyltransferases [BR:skh01003]
     01005 Lipopolysaccharide biosynthesis proteins [BR:skh01005]
     01011 Peptidoglycan biosynthesis and degradation proteins [BR:skh01011]
       STH12_02996 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       STH12_03891 murB; UDP-N-acetylenolpyruvoylglucosamine reductase
       STH12_04045 murC; UDP-N-acetylmuramate--L-alanine ligase
       STH12_04042 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase
       STH12_04039 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
       STH12_01593 ddl_1; D-alanine--D-alanine ligase
       STH12_02977 alr; Alanine racemase, biosynthetic
       STH12_03882 murI; Glutamate racemase
       STH12_04041 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase
       STH12_04044 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
       STH12_00359 uppP; Undecaprenyl-diphosphatase
       STH12_03114 undecaprenyl pyrophosphate phosphatase
       STH12_00449 murJ_1; putative peptidoglycan biosynthesis protein MurJ
       STH12_02015 murJ_2; putative peptidoglycan biosynthesis protein MurJ
       STH12_03306 mrcA; Penicillin-binding protein 1A
       STH12_02874 mrcB; Penicillin-binding protein 1B
       STH12_02391 spoVD; Stage V sporulation protein D
       STH12_04038 ftsI; Peptidoglycan synthase FtsI precursor
       STH12_02395 dacA; D-alanyl-D-alanine carboxypeptidase DacA precursor
       STH12_01421 dacB; D-alanyl-D-alanine carboxypeptidase DacB precursor
       STH12_03727 pbpG_2; D-alanyl-D-alanine endopeptidase precursor
       STH12_00265 pbpG_1; Penicillin-binding protein 2D
       STH12_00251 ybiS; putative L,D-transpeptidase YbiS precursor
       STH12_00935 murein L
       STH12_01275 murein L
       STH12_00837 mepM_2; Murein DD-endopeptidase MepM
       STH12_03497 Peptidase family M23
       STH12_01433 Sortase family protein
       STH12_01692 Sortase family protein
       STH12_01585 slt_1; Soluble lytic murein transglycosylase precursor
       STH12_02899 mltA; Membrane-bound lytic murein transglycosylase A precursor
       STH12_01617 mltB_1; Membrane-bound lytic murein transglycosylase B precursor
       STH12_01723 mltB_2; Membrane-bound lytic murein transglycosylase B precursor
       STH12_02393 mltB_3; Membrane-bound lytic murein transglycosylase B precursor
       STH12_00748 mltD_1; Membrane-bound lytic murein transglycosylase D precursor
       STH12_01574 mltD_2; Membrane-bound lytic murein transglycosylase D precursor
       STH12_02130 mltF; Membrane-bound lytic murein transglycosylase F precursor
       STH12_02940 amiB; N-acetylmuramoyl-L-alanine amidase AmiB precursor
       STH12_04070 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
       STH12_00361 lpp; Major outer membrane lipoprotein Lpp precursor
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01776 murI; glutamate racemase [EC:5.1.1.3]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
K03980 murJ; putative peptidoglycan lipid II flippase
K03980 murJ; putative peptidoglycan lipid II flippase
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.1.129 3.4.16.4]
K05365 mrcB; penicillin-binding protein 1B [EC:2.4.1.129 3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.1.129]
K19235 ybiS; L,D-transpeptidase YbiS
K21470 ycbB; L,D-transpeptidase YcbB
K21470 ycbB; L,D-transpeptidase YcbB
K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
K07284 srtA; sortase A [EC:3.4.22.70]
K07284 srtA; sortase A [EC:3.4.22.70]
K08309 slt; soluble lytic murein transglycosylase [EC:4.2.2.-]
K08304 mltA; membrane-bound lytic murein transglycosylase A [EC:4.2.2.-]
K08305 mltB; membrane-bound lytic murein transglycosylase B [EC:4.2.2.-]
K08305 mltB; membrane-bound lytic murein transglycosylase B [EC:4.2.2.-]
K08305 mltB; membrane-bound lytic murein transglycosylase B [EC:4.2.2.-]
K08307 mltD; membrane-bound lytic murein transglycosylase D [EC:4.2.2.-]
K08307 mltD; membrane-bound lytic murein transglycosylase D [EC:4.2.2.-]
K18691 mltF; membrane-bound lytic murein transglycosylase F [EC:4.2.2.-]
K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
K06078 lpp; murein lipoprotein
     01004 Lipid biosynthesis proteins [BR:skh01004]
     01008 Polyketide biosynthesis proteins [BR:skh01008]
     01006 Prenyltransferases [BR:skh01006]
     01007 Amino acid related enzymes [BR:skh01007]
     00199 Cytochrome P450
     00194 Photosynthesis proteins [BR:skh00194]
 
   09182 Protein families: genetic information processing
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: November 29, 2020