KEGG Orthology (KO) - Sulfitobacter sp. D7

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:suld03030]
       B5M07_03635 hypothetical protein
       B5M07_03820 DNA polymerase III subunit alpha
       B5M07_15390 DNA polymerase III subunit gamma/tau
       B5M07_07145 DNA polymerase III subunit delta'
       B5M07_01970 DNA polymerase III subunit delta
       B5M07_08810 DNA polymerase III subunit chi
       B5M07_00010 DNA polymerase III subunit beta
       B5M07_08100 replicative DNA helicase
       B5M07_06335 DNA primase
       B5M07_10205 single-stranded DNA-binding protein
       B5M07_15715 ribonuclease HI
       B5M07_01875 ribonuclease HII
       B5M07_16000 DNA polymerase I
       B5M07_10090 DNA ligase (NAD(+)) LigA
       B5M07_06535 ATP-dependent DNA ligase
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02314 dnaB; replicative DNA helicase [EC:3.6.4.12]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
     03410 Base excision repair [PATH:suld03410]
     03420 Nucleotide excision repair [PATH:suld03420]
     03430 Mismatch repair [PATH:suld03430]
       B5M07_00440 DNA mismatch repair protein MutS
       B5M07_02235 DNA mismatch repair protein MutL
       B5M07_11410 DNA helicase II
       B5M07_11600 exodeoxyribonuclease VII large subunit
       B5M07_01390 exodeoxyribonuclease VII small subunit
       B5M07_11690 single-stranded-DNA-specific exonuclease RecJ
       B5M07_10205 single-stranded DNA-binding protein
       B5M07_03820 DNA polymerase III subunit alpha
       B5M07_00010 DNA polymerase III subunit beta
       B5M07_15390 DNA polymerase III subunit gamma/tau
       B5M07_01970 DNA polymerase III subunit delta
       B5M07_07145 DNA polymerase III subunit delta'
       B5M07_03635 hypothetical protein
       B5M07_08810 DNA polymerase III subunit chi
       B5M07_10090 DNA ligase (NAD(+)) LigA
       B5M07_06535 ATP-dependent DNA ligase
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
     03440 Homologous recombination [PATH:suld03440]
       B5M07_11690 single-stranded-DNA-specific exonuclease RecJ
       B5M07_10205 single-stranded DNA-binding protein
       B5M07_00015 DNA replication/repair protein RecF
       B5M07_15640 DNA repair protein RecO
       B5M07_15400 recombination protein RecR
       B5M07_09655 recombinase RecA
       B5M07_16000 DNA polymerase I
       B5M07_13225 Holliday junction branch migration protein RuvA
       B5M07_13220 Holliday junction branch migration DNA helicase RuvB
       B5M07_13230 crossover junction endodeoxyribonuclease RuvC
       B5M07_10085 ATP-dependent DNA helicase RecG
       B5M07_14665 hypothetical protein
       B5M07_03820 DNA polymerase III subunit alpha
       B5M07_00010 DNA polymerase III subunit beta
       B5M07_15390 DNA polymerase III subunit gamma/tau
       B5M07_01970 DNA polymerase III subunit delta
       B5M07_07145 DNA polymerase III subunit delta'
       B5M07_03635 hypothetical protein
       B5M07_08810 DNA polymerase III subunit chi
       B5M07_13255 primosomal protein N'
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551 ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
     03450 Non-homologous end-joining [PATH:suld03450]
     03460 Fanconi anemia pathway
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:suld03000]
     03021 Transcription machinery [BR:suld03021]
     03019 Messenger RNA biogenesis [BR:suld03019]
     03041 Spliceosome
     03011 Ribosome [BR:suld03011]
     03009 Ribosome biogenesis [BR:suld03009]
     03016 Transfer RNA biogenesis [BR:suld03016]
     03012 Translation factors [BR:suld03012]
     03110 Chaperones and folding catalysts [BR:suld03110]
     04131 Membrane trafficking [BR:suld04131]
     04121 Ubiquitin system
     03051 Proteasome
     03032 DNA replication proteins [BR:suld03032]
       B5M07_15715 ribonuclease HI
       B5M07_06535 ATP-dependent DNA ligase
       B5M07_11700 hypothetical protein
       B5M07_01320 DNA-binding protein
       B5M07_08615 integration host factor subunit alpha
       B5M07_05710 integration host factor subunit beta
       B5M07_00005 chromosomal replication initiation protein DnaA
       B5M07_08100 replicative DNA helicase
       B5M07_06335 DNA primase
       B5M07_18065 replication protein C
       B5M07_18530 replication initiation protein
       B5M07_17430 replication initiator RepC
       B5M07_16560 replication initiator RepC
       B5M07_10205 single-stranded DNA-binding protein
       B5M07_03820 DNA polymerase III subunit alpha
       B5M07_00010 DNA polymerase III subunit beta
       B5M07_08810 DNA polymerase III subunit chi
       B5M07_01970 DNA polymerase III subunit delta
       B5M07_07145 DNA polymerase III subunit delta'
       B5M07_03635 hypothetical protein
       B5M07_15390 DNA polymerase III subunit gamma/tau
       B5M07_01875 ribonuclease HII
       B5M07_16000 DNA polymerase I
       B5M07_10090 DNA ligase (NAD(+)) LigA
       B5M07_09730 DNA gyrase subunit A
       B5M07_00025 DNA topoisomerase (ATP-hydrolyzing) subunit B
       B5M07_15020 DNA topoisomerase IV subunit A
       B5M07_12355 DNA topoisomerase IV subunit B
       B5M07_13050 DNA topoisomerase I
       B5M07_16750 DNA topoisomerase
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K02313 dnaA; chromosomal replication initiator protein
K02314 dnaB; replicative DNA helicase [EC:3.6.4.12]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K18996 repC; replication initiation protein RepC
K18996 repC; replication initiation protein RepC
K18996 repC; replication initiation protein RepC
K18996 repC; replication initiation protein RepC
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
     03036 Chromosome and associated proteins [BR:suld03036]
     03400 DNA repair and recombination proteins [BR:suld03400]
       B5M07_05865 cysteine methyltransferase
       B5M07_09055 deoxyribodipyrimidine photolyase
       B5M07_08255 uracil-DNA glycosylase
       B5M07_01895 A/G-specific adenine glycosylase
       B5M07_15890 endonuclease III
       B5M07_06535 ATP-dependent DNA ligase
       B5M07_00265 NTP pyrophosphohydrolase
       B5M07_00395 NUDIX hydrolase
       B5M07_02385 DNA mismatch repair protein MutT
       B5M07_13680 NUDIX hydrolase
       B5M07_02890 deoxyuridine 5'-triphosphate nucleotidohydrolase
       B5M07_15885 6-O-methylguanine DNA methyltransferase
       B5M07_00220 alkylated DNA repair dioxygenase
       B5M07_14015 uracil-DNA glycosylase
       B5M07_07265 uracil-DNA glycosylase
       B5M07_08525 3-methyladenine DNA glycosylase
       B5M07_13865 DNA-3-methyladenine glycosylase
       B5M07_16535 DNA-formamidopyrimidine glycosylase
       B5M07_08545 exodeoxyribonuclease III
       B5M07_02015 exodeoxyribonuclease III
       B5M07_11690 single-stranded-DNA-specific exonuclease RecJ
       B5M07_10090 DNA ligase (NAD(+)) LigA
       B5M07_16000 DNA polymerase I
       B5M07_07920 excinuclease ABC subunit A
       B5M07_03155 excinuclease ABC subunit B
       B5M07_14090 excinuclease ABC subunit C
       B5M07_11410 DNA helicase II
       B5M07_14920 DNA-directed RNA polymerase subunit beta
       B5M07_14915 DNA-directed RNA polymerase subunit beta'
       B5M07_14710 DNA-directed RNA polymerase subunit alpha
       B5M07_15690 DNA-directed RNA polymerase subunit omega
       B5M07_09810 transcription-repair coupling factor
       B5M07_00440 DNA mismatch repair protein MutS
       B5M07_02235 DNA mismatch repair protein MutL
       B5M07_11600 exodeoxyribonuclease VII large subunit
       B5M07_01390 exodeoxyribonuclease VII small subunit
       B5M07_03820 DNA polymerase III subunit alpha
       B5M07_00010 DNA polymerase III subunit beta
       B5M07_08810 DNA polymerase III subunit chi
       B5M07_01970 DNA polymerase III subunit delta
       B5M07_07145 DNA polymerase III subunit delta'
       B5M07_03635 hypothetical protein
       B5M07_15390 DNA polymerase III subunit gamma/tau
       B5M07_10205 single-stranded DNA-binding protein
       B5M07_14665 hypothetical protein
       B5M07_09655 recombinase RecA
       B5M07_13225 Holliday junction branch migration protein RuvA
       B5M07_13220 Holliday junction branch migration DNA helicase RuvB
       B5M07_13230 crossover junction endodeoxyribonuclease RuvC
       B5M07_13255 primosomal protein N'
       B5M07_18260 hypothetical protein
       B5M07_18255 exonuclease sbcCD subunit D
       B5M07_08070 DNA repair protein RadA
       B5M07_00015 DNA replication/repair protein RecF
       B5M07_10085 ATP-dependent DNA helicase RecG
       B5M07_15640 DNA repair protein RecO
       B5M07_15400 recombination protein RecR
       B5M07_11270 DNA repair protein RecN
       B5M07_00600 double-strand break repair helicase AddA
       B5M07_00605 double-strand break repair protein AddB
       B5M07_07065 Ku protein
       B5M07_07060 DNA ligase D
       B5M07_09730 DNA gyrase subunit A
       B5M07_00025 DNA topoisomerase (ATP-hydrolyzing) subunit B
       B5M07_13050 DNA topoisomerase I
       B5M07_16750 DNA topoisomerase
       B5M07_01320 DNA-binding protein
       B5M07_08615 integration host factor subunit alpha
       B5M07_05710 integration host factor subunit beta
       B5M07_16060 DNA helicase RecQ
       B5M07_17715 DNA-binding protein
       B5M07_05040 DNA-binding protein
       B5M07_02380 DNA polymerase IV
       B5M07_08235 repressor LexA
       B5M07_07255 hypothetical protein
       B5M07_07250 protein ImuB
       B5M07_07245 error-prone DNA polymerase
       B5M07_18190 ATP-dependent helicase
       B5M07_13135 DNA ligase-associated DEXH box helicase
       B5M07_08325 ribonucleoside-diphosphate reductase
       B5M07_03885 ribonucleoside-diphosphate reductase
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phrB; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551 ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:3.1.-.- 3.6.4.12]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:3.1.-.- 3.6.4.12]
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
     03029 Mitochondrial biogenesis [BR:suld03029]
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

[ KO | BRITE | KEGG2 | KEGG ]
Last updated: August 7, 2020