KEGG Orthology (KO) - Thiobacillus denitrificans

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:tbd03000]
     03021 Transcription machinery [BR:tbd03021]
     03019 Messenger RNA biogenesis [BR:tbd03019]
     03041 Spliceosome
     03011 Ribosome [BR:tbd03011]
     03009 Ribosome biogenesis [BR:tbd03009]
       Tbd_2086 ribonuclease III
       Tbd_0611 Protein of unknown function RIO1
       Tbd_1839 Exonuclease
       Tbd_2085 GTPase
       Tbd_0866 putative conserved GTP-binding protein
       Tbd_0691 Transcriptional regulators
       Tbd_2533 Transcriptional regulators
       Tbd_0698 NusA antitermination factor
       Tbd_2192 NusB antitermination factor
       Tbd_0393 NusG antitermination factor
       Tbd_0779 pseudouridine synthase
       Tbd_2340 ribosomal RNA 16S rRNA dimethylase
       Tbd_0016 Fmu
       Tbd_2598 putative tRNA and rRNA cytosine-C5-methylase
       Tbd_0155 conserved hypothetical protein
       Tbd_2807 glucose inhibited division protein
       Tbd_0111 methyltransferase
       Tbd_1558 probable transmembrane protein
       Tbd_0108 Protein of unknown function UPF0011
       Tbd_1059 rRNA (guanine-N1-)-methyltransferase
       Tbd_0609 RNA methyltransferase TrmH
       Tbd_1132 cell division protein FtsJ
       Tbd_2439 conserved hypothetical protein
       Tbd_0591 Conserved hypothetical protein
       Tbd_1951 Fe-S-cluster redox enzyme
       Tbd_0970 23S rRNA methyltransferase/RumA
       Tbd_0658 ribosomal large subunit pseudouridine synthase A
       Tbd_1258 pseudouridine synthase
       Tbd_1563 pseudouridine synthase
       Tbd_0810 pseudouridine synthase
       Tbd_0853 pseudouridine synthase
       Tbd_0435 pseudouridine synthase
       Tbd_1724 Ribosomal-protein-alanine acetyltransferase
       Tbd_2374 16S rRNA processing protein RimM
       Tbd_1764 conserved hypothetical protein
       Tbd_0612 Protein of unknown function DUF181
       Tbd_0180 ribosomal protein L11 methyltransferase
       Tbd_1270 modification methylase HemK
       Tbd_0585 conserved hypothetical protein
       Tbd_1564 ribonuclease E and G
       Tbd_2437 ribonuclease E and G
       Tbd_1842 GTPase EngC
       Tbd_0598 GTP-binding protein
       Tbd_2120 GTPase
       Tbd_0602 GTP-binding protein HflX
       Tbd_1363 putative GTP-binding protein
       Tbd_2460 probable Sua5/YciO/YrdC family protein
       Tbd_0471 Metal dependent phosphohydrolase
       Tbd_0696 ribosome-binding factor A
       Tbd_0699 conserved hypothetical protein
       Tbd_1157 conserved hypothetical protein
       Tbd_2440 Iojap-related protein
       Tbd_2704 Protein of unknown function UPF0054
       Tbd_1131 Protein of unknown function UPF0044
       Tbd_2147 conserved hypothetical protein
       Tbd_0532 Possible Sigma 54 modulation protein/ribosomal protein S30EA
       Tbd_0390 Conserved hypothetical protein
K03685 rnc; ribonuclease III [EC:3.1.26.3]
K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
K13288 orn; oligoribonuclease [EC:3.1.-.-]
K03595 era; GTPase
K03979 obgE; GTPase [EC:3.6.5.-]
K06204 dksA; DnaK suppressor protein
K06204 dksA; DnaK suppressor protein
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
K02860 rimM; 16S rRNA processing protein RimM
K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
K08300 rne; ribonuclease E [EC:3.1.26.12]
K08301 rng; ribonuclease G [EC:3.1.26.-]
K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
K03977 engA; GTPase
K14540 rbgA; ribosome biogenesis GTPase A
K03665 hflX; GTPase
K03665 hflX; GTPase
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
K02834 rbfA; ribosome-binding factor A
K09748 rimP; ribosome maturation factor RimP
K14761 ybcJ; ribosome-associated protein
K09710 ybeB; ribosome-associated protein
K07042 ybeY; probable rRNA maturation factor
K07574 yhbY; RNA-binding protein
K09889 yjgA; ribosome-associated protein
K05808 yhbH; putative sigma-54 modulation protein
K06942 ychF; ribosome-binding ATPase
     03016 Transfer RNA biogenesis [BR:tbd03016]
     03012 Translation factors [BR:tbd03012]
     03110 Chaperones and folding catalysts [BR:tbd03110]
     04131 Membrane trafficking [BR:tbd04131]
     04121 Ubiquitin system [BR:tbd04121]
     03051 Proteasome [BR:tbd03051]
     03032 DNA replication proteins [BR:tbd03032]
     03036 Chromosome and associated proteins [BR:tbd03036]
     03400 DNA repair and recombination proteins [BR:tbd03400]
     03029 Mitochondrial biogenesis [BR:tbd03029]
       Tbd_1832 cytochrome B subunit of cytochrome bc1
       Tbd_0697 initiation factor 2
       Tbd_1008 initiation factor 3
       Tbd_0786 Elongation factor Ts
       Tbd_0391 translation elongation factor Tu
       Tbd_0403 translation elongation factor Tu
       Tbd_0402 translation elongation factor G
       Tbd_1553 Ribosomal protein S32
       Tbd_2105 ribosomal protein S6
       Tbd_2085 GTPase
       Tbd_0459 tyrosyl-tRNA synthetase
       Tbd_2445 leucyl-tRNA synthetase
       Tbd_0442 aspartyl-tRNA synthetase
       Tbd_2782 arginyl-tRNA synthetase
       Tbd_0258 glutamyl-tRNA(Gln) amidotransferase A subunit
       Tbd_0257 glutamyl-tRNA(Gln) amidotransferase B subunit
       Tbd_0259 glutamyl-tRNA(Gln) amidotransferase C subunit
       Tbd_0438 Single-strand binding protein
       Tbd_0793 surface antigen (D15)
       Tbd_1538 molecular chaperone protein DnaK
       Tbd_1537 molecular chaperone protein GrpE
       Tbd_0091 chaperonin GroEL (Hsp60
       Tbd_0092 chaperonin GroES (Hsp10
       Tbd_1539 molecular chaperone protein DnaJ
       Tbd_1164 Cysteine desulfurase IscS
       Tbd_1167 Co-chaperone Hsc20
       Tbd_2499 Glutaredoxin-related protein
       Tbd_2108 ATP-binding protein involved in chromosome partitioning
       Tbd_0335 protoheme IX farnesyltransferase
       Tbd_0328 probable cytochrome C oxidase assembly transmembrane protein
       Tbd_0334 putative cytochrome aa3 oxidase assembly protein
       Tbd_2825 preprotein translocase subunit YidC
       Tbd_0332 SURF1 family protein
       Tbd_0337 putative SCO1/SenC family protein
       Tbd_1078 Chaperone protein htpG
K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
K02519 infB; translation initiation factor IF-2
K02520 infC; translation initiation factor IF-3
K02357 tsf; elongation factor Ts
K02358 tuf; elongation factor Tu
K02358 tuf; elongation factor Tu
K02355 fusA; elongation factor G
K02911 RP-L32; large subunit ribosomal protein L32
K02990 RP-S6; small subunit ribosomal protein S6
K03595 era; GTPase
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
K03111 ssb; single-strand DNA-binding protein
K07277 SAM50; outer membrane protein insertion porin family
K04043 dnaK; molecular chaperone DnaK
K03687 GRPE; molecular chaperone GrpE
K04077 groEL; chaperonin GroEL
K04078 groES; chaperonin GroES
K03686 dnaJ; molecular chaperone DnaJ
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K04082 hscB; molecular chaperone HscB
K07390 grxD; monothiol glutaredoxin
K03593 mrp; ATP-binding protein involved in chromosome partitioning
K02257 COX10; heme o synthase [EC:2.5.1.141]
K02258 COX11; cytochrome c oxidase assembly protein subunit 11
K02259 COX15; cytochrome c oxidase assembly protein subunit 15
K03217 yidC; YidC/Oxa1 family membrane protein insertase
K14998 SURF1; surfeit locus 1 family protein
K07152 SCO1; protein SCO1
K04079 HSP90A; molecular chaperone HtpG
 
   09183 Protein families: signaling and cellular processes
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: January 17, 2021